RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 MAJINQ3KP22 176 aa14.28□□□□□ -0.12
SMCO4-201ENST00000298966 Q9H8V8 135 aa14.28□□□□□ -0.12
SMCO4-201ENST00000298966 hDV102S1A0JD36 115 aa14.27□□□□□ -0.13
SMCO4-201ENST00000298966 OPRPNQ99935 248 aaPredicted RBP14.27□□□□□ -0.13
SMCO4-201ENST00000298966 PRO1933Q9H354 126 aa14.27□□□□□ -0.13
SMCO4-201ENST00000298966 FAT1Q14517 4588 aa14.27□□□□□ -0.13
SMCO4-201ENST00000298966 GAGE6Q13070 117 aa14.26□□□□□ -0.13
SMCO4-201ENST00000298966 CDC42SE2Q9NRR3 84 aa14.26□□□□□ -0.13
SMCO4-201ENST00000298966 IGLV4-69A0A075B6H9 119 aa14.25□□□□□ -0.13
SMCO4-201ENST00000298966 SEC11AP67812 179 aa14.25□□□□□ -0.13
SMCO4-201ENST00000298966 Q6ZUT4 128 aa14.24□□□□□ -0.13
SMCO4-201ENST00000298966 NFE4Q86UQ8 179 aa14.24□□□□□ -0.13
SMCO4-201ENST00000298966 KRTAP1-5Q9BYS1 174 aa14.24□□□□□ -0.13
SMCO4-201ENST00000298966 PCP4L1A6NKN8 68 aa14.23□□□□□ -0.13
SMCO4-201ENST00000298966 TMEM262E9PQX1 116 aa14.23□□□□□ -0.13
SMCO4-201ENST00000298966 ZC2HC1BQ5TFG8 222 aa14.23□□□□□ -0.13
SMCO4-201ENST00000298966 CCL25O15444 150 aa14.22□□□□□ -0.13
SMCO4-201ENST00000298966 IGLC3P0DOY3 106 aa14.22□□□□□ -0.13
SMCO4-201ENST00000298966 FAM19A3Q7Z5A8 133 aa14.22□□□□□ -0.13
SMCO4-201ENST00000298966 FLG2Q5D862 2391 aaPredicted RBP14.22□□□□□ -0.13
SMCO4-201ENST00000298966 VPS13BQ7Z7G8 4022 aa14.21□□□□□ -0.13
SMCO4-201ENST00000298966 RBX1P62877 108 aa14.21□□□□□ -0.13
SMCO4-201ENST00000298966 ANKRD39Q53RE8 183 aa14.21□□□□□ -0.13
SMCO4-201ENST00000298966 MIEN1Q9BRT3 115 aa14.21□□□□□ -0.13
SMCO4-201ENST00000298966 C11orf86A6NJI1 115 aa14.2□□□□□ -0.14
SMCO4-201ENST00000298966 DDTP30046 118 aa14.2□□□□□ -0.14
SMCO4-201ENST00000298966 Q5VSD8 79 aa14.2□□□□□ -0.14
SMCO4-201ENST00000298966 STPG4Q8N801 248 aa14.2□□□□□ -0.14
SMCO4-201ENST00000298966 UQCR10Q9UDW1 63 aa14.2□□□□□ -0.14
SMCO4-201ENST00000298966 MYCBP2O75592 4640 aa14.2□□□□□ -0.14
SMCO4-201ENST00000298966 TINCRA0A1B0GVN0 87 aa14.19□□□□□ -0.14
SMCO4-201ENST00000298966 ESRGQ1W209 222 aa14.19□□□□□ -0.14
SMCO4-201ENST00000298966 UBE2D1P51668 147 aa14.18□□□□□ -0.14
SMCO4-201ENST00000298966 MPV17L2Q567V2 206 aa14.18□□□□□ -0.14
SMCO4-201ENST00000298966 UPK3BQ9BT76 320 aa14.18□□□□□ -0.14
SMCO4-201ENST00000298966 CHAC1Q9BUX1 264 aa14.18□□□□□ -0.14
SMCO4-201ENST00000298966 PGPEP1Q9NXJ5 209 aa14.18□□□□□ -0.14
SMCO4-201ENST00000298966 SRRM2Q9UQ35 2752 aaKnown RBP14.18□□□□□ -0.14
SMCO4-201ENST00000298966 HERVK_113P63121 156 aa14.17□□□□□ -0.14
SMCO4-201ENST00000298966 MRPS16Q9Y3D3 137 aaKnown RBP14.17□□□□□ -0.14
SMCO4-201ENST00000298966 IGLV4-60A0A075B6I1 120 aa14.16□□□□□ -0.14
SMCO4-201ENST00000298966 A0A0J9YXV3 536 aa14.16□□□□□ -0.14
SMCO4-201ENST00000298966 COX8AP10176 69 aa14.16□□□□□ -0.14
SMCO4-201ENST00000298966 XGP55808 180 aa14.16□□□□□ -0.14
SMCO4-201ENST00000298966 HERVK_113P61574 105 aa14.16□□□□□ -0.14
SMCO4-201ENST00000298966 RNASE13Q5GAN3 156 aaKnown RBP14.16□□□□□ -0.14
SMCO4-201ENST00000298966 EREGO14944 169 aa14.15□□□□□ -0.14
SMCO4-201ENST00000298966 SLC25A34Q6PIV7 304 aa14.15□□□□□ -0.14
SMCO4-201ENST00000298966 C14orf144Q96I85 54 aa14.15□□□□□ -0.14
SMCO4-201ENST00000298966 GEMIN7Q9H840 131 aaKnown RBP14.15□□□□□ -0.14
SMCO4-201ENST00000298966 E9PLD3 99 aa14.13□□□□□ -0.15
SMCO4-201ENST00000298966 DLEU1O43261 78 aa14.13□□□□□ -0.15
SMCO4-201ENST00000298966 ZNF22P17026 224 aaPredicted RBP14.13□□□□□ -0.15
SMCO4-201ENST00000298966 LINC01556Q5JQF7 62 aa14.13□□□□□ -0.15
SMCO4-201ENST00000298966 IGLV5-45A0A087WSX0 123 aa14.12□□□□□ -0.15
SMCO4-201ENST00000298966 H3BRM9 83 aa14.12□□□□□ -0.15
SMCO4-201ENST00000298966 ANGP03950 147 aaKnown RBP14.12□□□□□ -0.15
SMCO4-201ENST00000298966 SS18Q15532 418 aa14.12□□□□□ -0.15
SMCO4-201ENST00000298966 TRAV13-1A0A0B4J241 112 aa14.11□□□□□ -0.15
SMCO4-201ENST00000298966 TMEM170BQ5T4T1 132 aa14.11□□□□□ -0.15
SMCO4-201ENST00000298966 IGKV2D-26A0A0A0MRZ7 120 aa14.1□□□□□ -0.15
SMCO4-201ENST00000298966 TMEM223A0PJW6 202 aa14.1□□□□□ -0.15
SMCO4-201ENST00000298966 LINC00587B1AMM8 73 aa14.1□□□□□ -0.15
SMCO4-201ENST00000298966 K7EP13 123 aa14.1□□□□□ -0.15
SMCO4-201ENST00000298966 DNAH10OSP0CZ25 163 aa14.1□□□□□ -0.15
SMCO4-201ENST00000298966 FUSP35637 526 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMCO4-201ENST00000298966 NMUP48645 174 aa14.1□□□□□ -0.15
SMCO4-201ENST00000298966 LINC00242Q5T6M2 205 aa14.1□□□□□ -0.15
SMCO4-201ENST00000298966 WFDC10BQ8IUB3 73 aa14.1□□□□□ -0.15
SMCO4-201ENST00000298966 BOD1L2Q8IYS8 172 aa14.1□□□□□ -0.15
SMCO4-201ENST00000298966 LINC00959A0A1B0GUT2 108 aa14.09□□□□□ -0.15
SMCO4-201ENST00000298966 REG3AQ06141 175 aa14.09□□□□□ -0.15
SMCO4-201ENST00000298966 Q6ZRN7 208 aaPredicted RBP14.09□□□□□ -0.15
SMCO4-201ENST00000298966 PRR34Q9NV39 138 aa14.09□□□□□ -0.15
SMCO4-201ENST00000298966 HNRNPA3P51991 378 aaKnown RBP14.08□□□□□ -0.16
SMCO4-201ENST00000298966 LINC00269Q8N2A0 174 aa14.08□□□□□ -0.16
SMCO4-201ENST00000298966 TRAV8-4A0A0B4J246 113 aa14.07□□□□□ -0.16
SMCO4-201ENST00000298966 SIVA1O15304 175 aa14.07□□□□□ -0.16
SMCO4-201ENST00000298966 CRPP02741 224 aa14.07□□□□□ -0.16
SMCO4-201ENST00000298966 LINC00469Q8N7U9 141 aa14.07□□□□□ -0.16
SMCO4-201ENST00000298966 PCP2Q8IVA1 136 aa14.06□□□□□ -0.16
SMCO4-201ENST00000298966 FAM229AH3BQW9 127 aa14.05□□□□□ -0.16
SMCO4-201ENST00000298966 J3QL48 77 aa14.05□□□□□ -0.16
SMCO4-201ENST00000298966 LEPROTO15243 131 aa14.05□□□□□ -0.16
SMCO4-201ENST00000298966 SMR3BP02814 79 aaPredicted RBP14.05□□□□□ -0.16
SMCO4-201ENST00000298966 MIAQ16674 131 aa14.05□□□□□ -0.16
SMCO4-201ENST00000298966 LINC01561Q8N1V8 128 aa14.05□□□□□ -0.16
SMCO4-201ENST00000298966 C10orf126Q8N4M7 172 aa14.05□□□□□ -0.16
SMCO4-201ENST00000298966 KRTAP10-1P60331 282 aa14.04□□□□□ -0.16
SMCO4-201ENST00000298966 PLEKHB2Q96CS7 222 aa14.04□□□□□ -0.16
SMCO4-201ENST00000298966 KLK12Q9UKR0 248 aa14.04□□□□□ -0.16
SMCO4-201ENST00000298966 IGKV3OR2-268A0A0C4DH90 116 aa14.03□□□□□ -0.16
SMCO4-201ENST00000298966 IGHV3-30P01768 117 aa14.03□□□□□ -0.16
SMCO4-201ENST00000298966 IGHV3-33P01772 117 aa14.03□□□□□ -0.16
SMCO4-201ENST00000298966 IGHV3-30-3P0DP02 117 aa14.03□□□□□ -0.16
SMCO4-201ENST00000298966 IGHV3-30-5P0DP03 117 aa14.03□□□□□ -0.16
SMCO4-201ENST00000298966 CDKN2A-AS1Q9UH64 79 aa14.03□□□□□ -0.16
SMCO4-201ENST00000298966 IGHV1-58A0A0C4DH39 117 aa14.02□□□□□ -0.17
SMCO4-201ENST00000298966 COX6A2Q02221 97 aa14.02□□□□□ -0.17
SMCO4-201ENST00000298966 CD164L2Q6UWJ8 174 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms