RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 PDE6GP18545 87 aa12.9□□□□□ -0.34
CDC42EP3-201ENST00000295324 UBE2D3P61077 147 aa12.89□□□□□ -0.35
CDC42EP3-201ENST00000295324 UBE2D2P62837 147 aa12.89□□□□□ -0.35
CDC42EP3-201ENST00000295324 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
CDC42EP3-201ENST00000295324 POLR2KP53803 58 aaKnown RBP12.88□□□□□ -0.35
CDC42EP3-201ENST00000295324 IGLV4-69A0A075B6H9 119 aa12.88□□□□□ -0.35
CDC42EP3-201ENST00000295324 PTH2Q96A98 100 aa12.88□□□□□ -0.35
CDC42EP3-201ENST00000295324 EML5Q05BV3 1969 aa12.88□□□□□ -0.35
CDC42EP3-201ENST00000295324 LINC00959A0A1B0GUT2 108 aa12.88□□□□□ -0.35
CDC42EP3-201ENST00000295324 LINC00643Q86TS7 51 aa12.87□□□□□ -0.35
CDC42EP3-201ENST00000295324 NRACQ8N912 160 aa12.87□□□□□ -0.35
CDC42EP3-201ENST00000295324 H0Y9J4 135 aa12.87□□□□□ -0.35
CDC42EP3-201ENST00000295324 MRPS36P82909 103 aaKnown RBP12.87□□□□□ -0.35
CDC42EP3-201ENST00000295324 CHCHD7Q9BUK0 85 aa12.87□□□□□ -0.35
CDC42EP3-201ENST00000295324 POLQO75417 2590 aa12.86□□□□□ -0.35
CDC42EP3-201ENST00000295324 CPAMD8Q8IZJ3 1885 aa12.86□□□□□ -0.35
CDC42EP3-201ENST00000295324 SPANXB1Q9NS25 103 aaPredicted RBP12.86□□□□□ -0.35
CDC42EP3-201ENST00000295324 SPTSSBQ8NFR3 76 aa12.85□□□□□ -0.35
CDC42EP3-201ENST00000295324 IGKV2D-26A0A0A0MRZ7 120 aa12.85□□□□□ -0.35
CDC42EP3-201ENST00000295324 A0A096LNI7 61 aa12.85□□□□□ -0.35
CDC42EP3-201ENST00000295324 UPK3BQ9BT76 320 aa12.85□□□□□ -0.35
CDC42EP3-201ENST00000295324 CNFNQ9BYD5 112 aa12.85□□□□□ -0.35
CDC42EP3-201ENST00000295324 UBE2D4Q9Y2X8 147 aa12.85□□□□□ -0.35
CDC42EP3-201ENST00000295324 TRAV23DV6A0A075B6W5 121 aa12.84□□□□□ -0.35
CDC42EP3-201ENST00000295324 C1orf158Q8N1D5 194 aa12.84□□□□□ -0.35
CDC42EP3-201ENST00000295324 TCL1BO95988 128 aa12.83□□□□□ -0.36
CDC42EP3-201ENST00000295324 LINC00308Q8TCZ7 52 aa12.83□□□□□ -0.36
CDC42EP3-201ENST00000295324 LOC107984640A0A0U1RRK4 108 aa12.83□□□□□ -0.36
CDC42EP3-201ENST00000295324 Q8N2B8 174 aa12.83□□□□□ -0.36
CDC42EP3-201ENST00000295324 COL4A2P08572 1712 aa12.82□□□□□ -0.36
CDC42EP3-201ENST00000295324 NHLRC4P0CG21 123 aaPredicted RBP12.82□□□□□ -0.36
CDC42EP3-201ENST00000295324 Q6ZTC4 211 aa12.82□□□□□ -0.36
CDC42EP3-201ENST00000295324 IGKV4-1P06312 121 aa12.81□□□□□ -0.36
CDC42EP3-201ENST00000295324 LINC00474Q9P2X8 69 aa12.81□□□□□ -0.36
CDC42EP3-201ENST00000295324 LINC00526Q96FQ7 95 aa12.81□□□□□ -0.36
CDC42EP3-201ENST00000295324 BPY2O14599 106 aa12.8□□□□□ -0.36
CDC42EP3-201ENST00000295324 NDUFV3P56181 108 aaKnown RBP12.79□□□□□ -0.36
CDC42EP3-201ENST00000295324 MPLKIPQ8TAP9 179 aa12.79□□□□□ -0.36
CDC42EP3-201ENST00000295324 CDC42SE2Q9NRR3 84 aa12.79□□□□□ -0.36
CDC42EP3-201ENST00000295324 MRPL55Q7Z7F7 128 aaKnown RBP12.79□□□□□ -0.36
CDC42EP3-201ENST00000295324 UBE2D1P51668 147 aa12.78□□□□□ -0.36
CDC42EP3-201ENST00000295324 C20orf197Q8N268 126 aa12.78□□□□□ -0.36
CDC42EP3-201ENST00000295324 EXPH5Q8NEV8 1989 aa12.77□□□□□ -0.36
CDC42EP3-201ENST00000295324 M0R378 163 aa12.77□□□□□ -0.37
CDC42EP3-201ENST00000295324 ACANP16112 2415 aa12.77□□□□□ -0.37
CDC42EP3-201ENST00000295324 FAM236DA0A1B0GTK5 79 aa12.77□□□□□ -0.37
CDC42EP3-201ENST00000295324 UQCRQO14949 82 aa12.77□□□□□ -0.37
CDC42EP3-201ENST00000295324 FAM236CP0DP71 79 aa12.77□□□□□ -0.37
CDC42EP3-201ENST00000295324 MUC7Q8TAX7 377 aa12.77□□□□□ -0.37
CDC42EP3-201ENST00000295324 ZNF706Q9Y5V0 76 aaPredicted RBP12.76□□□□□ -0.37
CDC42EP3-201ENST00000295324 TIMM17BO60830 172 aa12.76□□□□□ -0.37
CDC42EP3-201ENST00000295324 MT-ATP8P03928 68 aa12.76□□□□□ -0.37
CDC42EP3-201ENST00000295324 SDIM1Q6ZPB5 146 aa12.75□□□□□ -0.37
CDC42EP3-201ENST00000295324 IGKV2-28A0A075B6P5 120 aa12.75□□□□□ -0.37
CDC42EP3-201ENST00000295324 IGKV2D-28P01615 120 aa12.75□□□□□ -0.37
CDC42EP3-201ENST00000295324 FHL2Q14192 279 aa12.75□□□□□ -0.37
CDC42EP3-201ENST00000295324 Q8IZM0 81 aa12.75□□□□□ -0.37
CDC42EP3-201ENST00000295324 FLNBO75369 2602 aaKnown RBP12.74□□□□□ -0.37
CDC42EP3-201ENST00000295324 C6orf99Q4VX62 202 aa12.74□□□□□ -0.37
CDC42EP3-201ENST00000295324 CASC2Q6XLA1 102 aa12.73□□□□□ -0.37
CDC42EP3-201ENST00000295324 TEX49A0A1B0GTD5 131 aa12.73□□□□□ -0.37
CDC42EP3-201ENST00000295324 COX17Q14061 63 aa12.73□□□□□ -0.37
CDC42EP3-201ENST00000295324 FAM240AA0A1B0GVK7 77 aa12.72□□□□□ -0.37
CDC42EP3-201ENST00000295324 A8MZ25 164 aa12.72□□□□□ -0.37
CDC42EP3-201ENST00000295324 USP17L23D6RBM5 183 aa12.72□□□□□ -0.37
CDC42EP3-201ENST00000295324 COX8CQ7Z4L0 72 aa12.71□□□□□ -0.37
CDC42EP3-201ENST00000295324 ANKRD17O75179 2603 aaKnown RBP12.71□□□□□ -0.37
CDC42EP3-201ENST00000295324 BEAN1Q3B7T3 259 aa12.71□□□□□ -0.37
CDC42EP3-201ENST00000295324 CYSRT1A8MQ03 144 aa12.71□□□□□ -0.37
CDC42EP3-201ENST00000295324 GAS8-AS1O95177 125 aa12.71□□□□□ -0.37
CDC42EP3-201ENST00000295324 DHRS4-AS1Q9P1J3 65 aa12.71□□□□□ -0.38
CDC42EP3-201ENST00000295324 NDUFC2-KCTD14E9PQ53 114 aa12.7□□□□□ -0.38
CDC42EP3-201ENST00000295324 MAPKAPK5-AS1Q8N8E1 139 aa12.7□□□□□ -0.38
CDC42EP3-201ENST00000295324 ATP5EP2Q5VTU8 51 aa12.7□□□□□ -0.38
CDC42EP3-201ENST00000295324 C3orf22Q8N5N4 141 aa12.7□□□□□ -0.38
CDC42EP3-201ENST00000295324 A0A0U1RQV1 116 aa12.69□□□□□ -0.38
CDC42EP3-201ENST00000295324 ENHOQ6UWT2 76 aa12.69□□□□□ -0.38
CDC42EP3-201ENST00000295324 SCXQ7RTU7 201 aa12.68□□□□□ -0.38
CDC42EP3-201ENST00000295324 EGFEM1PQ0D2K5 195 aa12.68□□□□□ -0.38
CDC42EP3-201ENST00000295324 F8P00451 2351 aa12.68□□□□□ -0.38
CDC42EP3-201ENST00000295324 YPEL4Q96NS1 127 aa12.68□□□□□ -0.38
CDC42EP3-201ENST00000295324 FHL3Q13643 280 aa12.68□□□□□ -0.38
CDC42EP3-201ENST00000295324 LINC00242Q5T6M2 205 aa12.67□□□□□ -0.38
CDC42EP3-201ENST00000295324 PPDPFQ9H3Y8 114 aa12.67□□□□□ -0.38
CDC42EP3-201ENST00000295324 KRTAP24-1Q3LI83 254 aa12.67□□□□□ -0.38
CDC42EP3-201ENST00000295324 IGIPA6NJ69 53 aa12.67□□□□□ -0.38
CDC42EP3-201ENST00000295324 K7ERS5 55 aa12.67□□□□□ -0.38
CDC42EP3-201ENST00000295324 C1orf134Q5TEV5 83 aa12.67□□□□□ -0.38
CDC42EP3-201ENST00000295324 TRBV30A0A0K0K1B3 111 aa12.67□□□□□ -0.38
CDC42EP3-201ENST00000295324 IGLV5-52A0A0A0MRZ9 124 aa12.66□□□□□ -0.38
CDC42EP3-201ENST00000295324 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
CDC42EP3-201ENST00000295324 PLAC8L1A1L4L8 177 aa12.66□□□□□ -0.38
CDC42EP3-201ENST00000295324 V9GYY9 64 aa12.66□□□□□ -0.38
CDC42EP3-201ENST00000295324 RPL37AP8A6NKH3 93 aa12.65□□□□□ -0.38
CDC42EP3-201ENST00000295324 TP73-AS1Q9UF72 201 aa12.65□□□□□ -0.39
CDC42EP3-201ENST00000295324 SLPIP03973 132 aa12.64□□□□□ -0.39
CDC42EP3-201ENST00000295324 CSDC2Q9Y534 153 aaKnown RBP12.63□□□□□ -0.39
CDC42EP3-201ENST00000295324 UNQ6190/PRO20217Q6UXQ8 127 aa12.63□□□□□ -0.39
CDC42EP3-201ENST00000295324 LYPD5Q6UWN5 251 aa12.63□□□□□ -0.39
CDC42EP3-201ENST00000295324 IGLV4-60A0A075B6I1 120 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms