RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ADCYAP1P18509 176 aa6.22□□□□□ -1.41
CCDC58-201ENST00000291458 HNRNPA3P51991 378 aaKnown RBP6.22□□□□□ -1.41
CCDC58-201ENST00000291458 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
CCDC58-201ENST00000291458 TMEM136Q6ZRR5 245 aa6.22□□□□□ -1.41
CCDC58-201ENST00000291458 ATP5L2Q7Z4Y8 100 aa6.22□□□□□ -1.41
CCDC58-201ENST00000291458 TRBV24-1A0A075B6N3 115 aa6.21□□□□□ -1.42
CCDC58-201ENST00000291458 IFITM10A6NMD0 228 aa6.21□□□□□ -1.42
CCDC58-201ENST00000291458 PPBPP02775 128 aa6.21□□□□□ -1.42
CCDC58-201ENST00000291458 RAB5AP20339 215 aa6.21□□□□□ -1.42
CCDC58-201ENST00000291458 IFITM2Q01629 132 aa6.21□□□□□ -1.42
CCDC58-201ENST00000291458 MAP1LC3AQ9H492 121 aa6.21□□□□□ -1.42
CCDC58-201ENST00000291458 IGLV4-69A0A075B6H9 119 aa6.2□□□□□ -1.42
CCDC58-201ENST00000291458 C1orf196B1AJZ1 125 aa6.2□□□□□ -1.42
CCDC58-201ENST00000291458 RPL32P62910 135 aaKnown RBP6.2□□□□□ -1.42
CCDC58-201ENST00000291458 SPAG11BQ08648 103 aa6.2□□□□□ -1.42
CCDC58-201ENST00000291458 SYCNQ0VAF6 134 aa6.2□□□□□ -1.42
CCDC58-201ENST00000291458 COMMD7Q86VX2 200 aa6.2□□□□□ -1.42
CCDC58-201ENST00000291458 STPG4Q8N801 248 aa6.2□□□□□ -1.42
CCDC58-201ENST00000291458 CAMK2N2Q96S95 79 aa6.2□□□□□ -1.42
CCDC58-201ENST00000291458 SPANXA1Q9NS26 97 aa6.2□□□□□ -1.42
CCDC58-201ENST00000291458 DMBT1Q9UGM3 2413 aaPredicted RBP6.19□□□□□ -1.42
CCDC58-201ENST00000291458 PHOX2AO14813 284 aa6.19□□□□□ -1.42
CCDC58-201ENST00000291458 IFI27P40305 119 aaPredicted RBP6.19□□□□□ -1.42
CCDC58-201ENST00000291458 GAGE2BQ13066 116 aa6.19□□□□□ -1.42
CCDC58-201ENST00000291458 CIRBPQ14011 172 aaKnown RBP6.19□□□□□ -1.42
CCDC58-201ENST00000291458 KIAA1644Q3SXP7 199 aa6.19□□□□□ -1.42
CCDC58-201ENST00000291458 Q6ZRU5 148 aa6.19□□□□□ -1.42
CCDC58-201ENST00000291458 TIMM21Q9BVV7 248 aa6.19□□□□□ -1.42
CCDC58-201ENST00000291458 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
CCDC58-201ENST00000291458 CSDC2Q9Y534 153 aaKnown RBP6.19□□□□□ -1.42
CCDC58-201ENST00000291458 VPS13BQ7Z7G8 4022 aa6.19□□□□□ -1.42
CCDC58-201ENST00000291458 A0A0J9YXV3 536 aa6.18□□□□□ -1.42
CCDC58-201ENST00000291458 RPL18AQ02543 176 aaKnown RBP6.18□□□□□ -1.42
CCDC58-201ENST00000291458 ZC2HC1BQ5TFG8 222 aa6.18□□□□□ -1.42
CCDC58-201ENST00000291458 ORAOV1Q8WV07 137 aa6.18□□□□□ -1.42
CCDC58-201ENST00000291458 FAM104AQ969W3 186 aa6.18□□□□□ -1.42
CCDC58-201ENST00000291458 CTDSP1Q9GZU7 261 aa6.18□□□□□ -1.42
CCDC58-201ENST00000291458 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
CCDC58-201ENST00000291458 FAT1Q14517 4588 aa6.17□□□□□ -1.42
CCDC58-201ENST00000291458 TMEM218A2RU14 115 aa6.17□□□□□ -1.42
CCDC58-201ENST00000291458 APOMO95445 188 aa6.17□□□□□ -1.42
CCDC58-201ENST00000291458 C7orf33Q8WU49 177 aa6.17□□□□□ -1.42
CCDC58-201ENST00000291458 IGLV4-3A0A075B6K6 122 aa6.16□□□□□ -1.42
CCDC58-201ENST00000291458 TGIF2-C20orf24A0A0A6YYL0 155 aa6.16□□□□□ -1.42
CCDC58-201ENST00000291458 UQCC3Q6UW78 93 aa6.16□□□□□ -1.42
CCDC58-201ENST00000291458 C2orf66Q6UXQ4 117 aa6.16□□□□□ -1.42
CCDC58-201ENST00000291458 IMMP2LQ96T52 175 aa6.16□□□□□ -1.42
CCDC58-201ENST00000291458 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
CCDC58-201ENST00000291458 CYSLTR1Q9Y271 337 aa6.16□□□□□ -1.42
CCDC58-201ENST00000291458 LOC107984640A0A0U1RRK4 108 aa6.15□□□□□ -1.42
CCDC58-201ENST00000291458 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.42
CCDC58-201ENST00000291458 MRPS36P82909 103 aaKnown RBP6.15□□□□□ -1.42
CCDC58-201ENST00000291458 TEX43Q6ZNM6 134 aa6.15□□□□□ -1.42
CCDC58-201ENST00000291458 Q8N8P6 123 aa6.15□□□□□ -1.42
CCDC58-201ENST00000291458 TMEM141Q96I45 108 aa6.15□□□□□ -1.42
CCDC58-201ENST00000291458 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
CCDC58-201ENST00000291458 LAMTOR2Q9Y2Q5 125 aa6.15□□□□□ -1.42
CCDC58-201ENST00000291458 DNAH8Q96JB1 4490 aa6.15□□□□□ -1.43
CCDC58-201ENST00000291458 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
CCDC58-201ENST00000291458 S100PP25815 95 aa6.14□□□□□ -1.43
CCDC58-201ENST00000291458 PTTG1IPP53801 180 aa6.14□□□□□ -1.43
CCDC58-201ENST00000291458 Q6ZN92 141 aa6.14□□□□□ -1.43
CCDC58-201ENST00000291458 C2orf88Q9BSF0 95 aa6.14□□□□□ -1.43
CCDC58-201ENST00000291458 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
CCDC58-201ENST00000291458 IGHV3OR16-9A0A0B4J2B5 98 aa6.13□□□□□ -1.43
CCDC58-201ENST00000291458 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.13□□□□□ -1.43
CCDC58-201ENST00000291458 PRR3P79522 188 aaKnown RBP6.13□□□□□ -1.43
CCDC58-201ENST00000291458 ORMDL2Q53FV1 153 aa6.13□□□□□ -1.43
CCDC58-201ENST00000291458 OR10D4PQ8NGN7 298 aa6.13□□□□□ -1.43
CCDC58-201ENST00000291458 C2orf48Q96LS8 159 aa6.13□□□□□ -1.43
CCDC58-201ENST00000291458 SEC11CQ9BY50 192 aa6.13□□□□□ -1.43
CCDC58-201ENST00000291458 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
CCDC58-201ENST00000291458 RPS10P5Q9NQ39 176 aa6.13□□□□□ -1.43
CCDC58-201ENST00000291458 NDUFA1O15239 70 aa6.12□□□□□ -1.43
CCDC58-201ENST00000291458 LINC00242Q5T6M2 205 aa6.12□□□□□ -1.43
CCDC58-201ENST00000291458 C10orf25Q5T742 122 aa6.12□□□□□ -1.43
CCDC58-201ENST00000291458 UNQ6190/PRO20217Q6UXQ8 127 aa6.12□□□□□ -1.43
CCDC58-201ENST00000291458 LINC00173Q6ZV60 143 aa6.12□□□□□ -1.43
CCDC58-201ENST00000291458 NXT2Q9NPJ8 142 aaKnown RBP6.12□□□□□ -1.43
CCDC58-201ENST00000291458 TOMM7Q9P0U1 55 aa6.12□□□□□ -1.43
CCDC58-201ENST00000291458 LINC00474Q9P2X8 69 aa6.12□□□□□ -1.43
CCDC58-201ENST00000291458 PYGO1Q9Y3Y4 419 aa6.12□□□□□ -1.43
CCDC58-201ENST00000291458 PRSS47A8MTI9 375 aa6.11□□□□□ -1.43
CCDC58-201ENST00000291458 OXTP01178 125 aa6.11□□□□□ -1.43
CCDC58-201ENST00000291458 UBE2D1P51668 147 aa6.11□□□□□ -1.43
CCDC58-201ENST00000291458 GAGE2EQ4V326 116 aa6.11□□□□□ -1.43
CCDC58-201ENST00000291458 C2orf82Q6UX34 121 aa6.11□□□□□ -1.43
CCDC58-201ENST00000291458 VCX2Q9H322 139 aa6.11□□□□□ -1.43
CCDC58-201ENST00000291458 GAGE2DQ9UEU5 116 aa6.11□□□□□ -1.43
CCDC58-201ENST00000291458 A0A1W2PNN7 141 aa6.1□□□□□ -1.43
CCDC58-201ENST00000291458 FAM168BA1KXE4 195 aa6.1□□□□□ -1.43
CCDC58-201ENST00000291458 FABP9Q0Z7S8 132 aa6.1□□□□□ -1.43
CCDC58-201ENST00000291458 C9orf116Q5BN46 136 aaPredicted RBP6.1□□□□□ -1.43
CCDC58-201ENST00000291458 FAM19A5Q7Z5A7 132 aaPredicted RBP6.1□□□□□ -1.43
CCDC58-201ENST00000291458 C6orf48Q9UBA6 75 aa6.1□□□□□ -1.43
CCDC58-201ENST00000291458 MYCBP2O75592 4640 aa6.1□□□□□ -1.43
CCDC58-201ENST00000291458 TRAV9-1A0A075B6T8 112 aa6.09□□□□□ -1.43
CCDC58-201ENST00000291458 A0A087WZ39 114 aa6.09□□□□□ -1.43
CCDC58-201ENST00000291458 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
CCDC58-201ENST00000291458 FA2HQ7L5A8 372 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms