RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 Q6ZQY7 126 aa12.08□□□□□ -0.48
SH3RF1-201ENST00000284637 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
SH3RF1-201ENST00000284637 EML5Q05BV3 1969 aa12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 A0A087WVE0 104 aa12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 IGKV4-1P06312 121 aa12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 C9orf85Q96MD7 179 aa12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 C11orf45Q8TAV5 145 aa12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 C3orf84H3BNL1 204 aa12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 Q6ZSV7 163 aa12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 SMIM11BQ8TCY0 68 aa12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 PRO0628Q9UI54 55 aa12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 AGRNO00468 2067 aa12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 BBC3Q96PG8 261 aaPredicted RBP12.07□□□□□ -0.48
SH3RF1-201ENST00000284637 IGLV4-69A0A075B6H9 119 aa12.05□□□□□ -0.48
SH3RF1-201ENST00000284637 MIFP14174 115 aa12.05□□□□□ -0.48
SH3RF1-201ENST00000284637 SMCPP49901 116 aaPredicted RBP12.05□□□□□ -0.48
SH3RF1-201ENST00000284637 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
SH3RF1-201ENST00000284637 RPS28P62857 69 aaKnown RBP12.05□□□□□ -0.48
SH3RF1-201ENST00000284637 TSPEAR-AS2P59090 65 aa12.04□□□□□ -0.48
SH3RF1-201ENST00000284637 C18orf65Q6ZTR6 163 aa12.04□□□□□ -0.48
SH3RF1-201ENST00000284637 B9D2Q9BPU9 175 aa12.04□□□□□ -0.48
SH3RF1-201ENST00000284637 FAM19A1Q7Z5A9 133 aa12.04□□□□□ -0.48
SH3RF1-201ENST00000284637 USP9XQ93008 2570 aaPredicted RBP12.04□□□□□ -0.48
SH3RF1-201ENST00000284637 CENPFP49454 3210 aa12.03□□□□□ -0.48
SH3RF1-201ENST00000284637 JMJD1CQ15652 2540 aa12.03□□□□□ -0.48
SH3RF1-201ENST00000284637 IGKV2-28A0A075B6P5 120 aa12.02□□□□□ -0.49
SH3RF1-201ENST00000284637 IGKV2D-28P01615 120 aa12.02□□□□□ -0.49
SH3RF1-201ENST00000284637 WFDC10BQ8IUB3 73 aa12.02□□□□□ -0.49
SH3RF1-201ENST00000284637 IGLV2-18A0A075B6J9 118 aa12.01□□□□□ -0.49
SH3RF1-201ENST00000284637 LINC00959A0A1B0GUT2 108 aa12.01□□□□□ -0.49
SH3RF1-201ENST00000284637 COX8CQ7Z4L0 72 aa12.01□□□□□ -0.49
SH3RF1-201ENST00000284637 EDN2P20800 178 aa12.01□□□□□ -0.49
SH3RF1-201ENST00000284637 CRYGAP11844 174 aa12.01□□□□□ -0.49
SH3RF1-201ENST00000284637 CD164L2Q6UWJ8 174 aa12.01□□□□□ -0.49
SH3RF1-201ENST00000284637 DEFB131BA0A096LNP1 70 aa12□□□□□ -0.49
SH3RF1-201ENST00000284637 ZNF702PQ9H963 129 aa12□□□□□ -0.49
SH3RF1-201ENST00000284637 PSMG3-AS1Q96PY0 264 aa11.99□□□□□ -0.49
SH3RF1-201ENST00000284637 IGLV1-40P01703 118 aa11.99□□□□□ -0.49
SH3RF1-201ENST00000284637 SYCNQ0VAF6 134 aa11.99□□□□□ -0.49
SH3RF1-201ENST00000284637 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
SH3RF1-201ENST00000284637 ABCA12Q86UK0 2595 aa11.99□□□□□ -0.49
SH3RF1-201ENST00000284637 SOSTDC1Q6X4U4 206 aa11.99□□□□□ -0.49
SH3RF1-201ENST00000284637 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
SH3RF1-201ENST00000284637 CDC42SE2Q9NRR3 84 aa11.98□□□□□ -0.49
SH3RF1-201ENST00000284637 PRR4Q16378 134 aa11.97□□□□□ -0.49
SH3RF1-201ENST00000284637 A0A087WZ39 114 aa11.97□□□□□ -0.49
SH3RF1-201ENST00000284637 RPL28P46779 137 aaKnown RBP11.97□□□□□ -0.49
SH3RF1-201ENST00000284637 PRRC2AP48634 2157 aaKnown RBP11.97□□□□□ -0.49
SH3RF1-201ENST00000284637 PMAIP1Q13794 54 aa11.96□□□□□ -0.49
SH3RF1-201ENST00000284637 A6NED7 52 aa11.96□□□□□ -0.5
SH3RF1-201ENST00000284637 MUC22E2RYF6 1773 aaPredicted RBP11.96□□□□□ -0.5
SH3RF1-201ENST00000284637 CDSNQ15517 529 aa11.96□□□□□ -0.5
SH3RF1-201ENST00000284637 PRORYQ9H606 182 aa11.95□□□□□ -0.5
SH3RF1-201ENST00000284637 ZNF580Q9UK33 172 aa11.95□□□□□ -0.5
SH3RF1-201ENST00000284637 C10orf142B7Z368 130 aa11.95□□□□□ -0.5
SH3RF1-201ENST00000284637 FN1P02751 2386 aaKnown RBP11.95□□□□□ -0.5
SH3RF1-201ENST00000284637 A0A0J9YWU9 116 aa11.94□□□□□ -0.5
SH3RF1-201ENST00000284637 SEC61GP60059 68 aa11.94□□□□□ -0.5
SH3RF1-201ENST00000284637 ADAMTSL4-AS1Q5T5F5 129 aa11.94□□□□□ -0.5
SH3RF1-201ENST00000284637 WFDC13Q8IUB5 93 aa11.94□□□□□ -0.5
SH3RF1-201ENST00000284637 USP9YO00507 2555 aaPredicted RBP11.94□□□□□ -0.5
SH3RF1-201ENST00000284637 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.94□□□□□ -0.5
SH3RF1-201ENST00000284637 ZFYVE26Q68DK2 2539 aa11.93□□□□□ -0.5
SH3RF1-201ENST00000284637 SBSPONQ8IVN8 264 aa11.93□□□□□ -0.5
SH3RF1-201ENST00000284637 CEP295Q9C0D2 2601 aa11.92□□□□□ -0.5
SH3RF1-201ENST00000284637 C14orf177Q52M58 125 aa11.92□□□□□ -0.5
SH3RF1-201ENST00000284637 NTM-AS1Q6ZSK4 140 aa11.92□□□□□ -0.5
SH3RF1-201ENST00000284637 SMIM1B2RUZ4 78 aa11.92□□□□□ -0.5
SH3RF1-201ENST00000284637 M0R378 163 aa11.91□□□□□ -0.5
SH3RF1-201ENST00000284637 AVPP01185 164 aa11.91□□□□□ -0.5
SH3RF1-201ENST00000284637 LINC01006Q8NI28 216 aa11.91□□□□□ -0.5
SH3RF1-201ENST00000284637 INAFM1C9JVW0 142 aa11.91□□□□□ -0.5
SH3RF1-201ENST00000284637 ZNF73O43830 326 aaPredicted RBP11.91□□□□□ -0.5
SH3RF1-201ENST00000284637 COX6A2Q02221 97 aa11.91□□□□□ -0.5
SH3RF1-201ENST00000284637 RETNQ9HD89 108 aa11.91□□□□□ -0.5
SH3RF1-201ENST00000284637 PKD1L2Q7Z442 2459 aa11.91□□□□□ -0.5
SH3RF1-201ENST00000284637 CEP192Q8TEP8 1941 aa11.9□□□□□ -0.5
SH3RF1-201ENST00000284637 LINC00846Q9NV44 126 aa11.9□□□□□ -0.5
SH3RF1-201ENST00000284637 LINC01546A6NGU7 62 aa11.89□□□□□ -0.51
SH3RF1-201ENST00000284637 C4orf26Q17RF5 130 aa11.89□□□□□ -0.51
SH3RF1-201ENST00000284637 RPL37AP8A6NKH3 93 aa11.89□□□□□ -0.51
SH3RF1-201ENST00000284637 Q8IZM0 81 aa11.89□□□□□ -0.51
SH3RF1-201ENST00000284637 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
SH3RF1-201ENST00000284637 CYSRT1A8MQ03 144 aa11.88□□□□□ -0.51
SH3RF1-201ENST00000284637 EP400Q96L91 3159 aa11.88□□□□□ -0.51
SH3RF1-201ENST00000284637 HILS1P60008 231 aa11.88□□□□□ -0.51
SH3RF1-201ENST00000284637 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
SH3RF1-201ENST00000284637 PRR3P79522 188 aaKnown RBP11.88□□□□□ -0.51
SH3RF1-201ENST00000284637 C9orf116Q5BN46 136 aaPredicted RBP11.88□□□□□ -0.51
SH3RF1-201ENST00000284637 LELP1Q5T871 98 aa11.88□□□□□ -0.51
SH3RF1-201ENST00000284637 LRCOL1A6NCL2 159 aa11.87□□□□□ -0.51
SH3RF1-201ENST00000284637 ODF3L2Q3SX64 289 aa11.87□□□□□ -0.51
SH3RF1-201ENST00000284637 UNQ6190/PRO20217Q6UXQ8 127 aa11.87□□□□□ -0.51
SH3RF1-201ENST00000284637 CASC2Q6XLA1 102 aa11.87□□□□□ -0.51
SH3RF1-201ENST00000284637 Q8N3U1 123 aa11.87□□□□□ -0.51
SH3RF1-201ENST00000284637 TRBV7-6A0A0J9YX20 115 aa11.87□□□□□ -0.51
SH3RF1-201ENST00000284637 PRYO14603 147 aa11.86□□□□□ -0.51
SH3RF1-201ENST00000284637 COX17Q14061 63 aa11.86□□□□□ -0.51
SH3RF1-201ENST00000284637 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.86□□□□□ -0.51
SH3RF1-201ENST00000284637 A0A087WYN8 130 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms