RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 MAPKAPK5-AS1Q8N8E1 139 aa12.98□□□□□ -0.33
NOTCH3-201ENST00000263388 SMIM26A0A096LP01 95 aa12.97□□□□□ -0.33
NOTCH3-201ENST00000263388 CD164L2Q6UWJ8 174 aa12.97□□□□□ -0.33
NOTCH3-201ENST00000263388 UBE2D4Q9Y2X8 147 aa12.97□□□□□ -0.33
NOTCH3-201ENST00000263388 IGLV2-11P01706 119 aa12.97□□□□□ -0.33
NOTCH3-201ENST00000263388 C6orf99Q4VX62 202 aa12.96□□□□□ -0.33
NOTCH3-201ENST00000263388 A0A096LNI7 61 aa12.96□□□□□ -0.33
NOTCH3-201ENST00000263388 MUC7Q8TAX7 377 aa12.96□□□□□ -0.33
NOTCH3-201ENST00000263388 UBE2D2P62837 147 aa12.96□□□□□ -0.34
NOTCH3-201ENST00000263388 FAM19A5Q7Z5A7 132 aaPredicted RBP12.95□□□□□ -0.34
NOTCH3-201ENST00000263388 LST1O00453 97 aa12.95□□□□□ -0.34
NOTCH3-201ENST00000263388 UBE2D3P61077 147 aa12.95□□□□□ -0.34
NOTCH3-201ENST00000263388 C2orf91Q6ZV80 131 aa12.95□□□□□ -0.34
NOTCH3-201ENST00000263388 XAGE1AQ9HD64 81 aa12.94□□□□□ -0.34
NOTCH3-201ENST00000263388 TSHBP01222 138 aa12.94□□□□□ -0.34
NOTCH3-201ENST00000263388 GOLGB1Q14789 3259 aaKnown RBP12.93□□□□□ -0.34
NOTCH3-201ENST00000263388 SYCNQ0VAF6 134 aa12.93□□□□□ -0.34
NOTCH3-201ENST00000263388 PRORYQ9H606 182 aa12.93□□□□□ -0.34
NOTCH3-201ENST00000263388 CRIP3Q6Q6R5 217 aa12.92□□□□□ -0.34
NOTCH3-201ENST00000263388 MRPS12O15235 138 aaKnown RBP12.92□□□□□ -0.34
NOTCH3-201ENST00000263388 WFDC10AQ9H1F0 79 aa12.92□□□□□ -0.34
NOTCH3-201ENST00000263388 LINC00474Q9P2X8 69 aa12.92□□□□□ -0.34
NOTCH3-201ENST00000263388 CNFNQ9BYD5 112 aa12.92□□□□□ -0.34
NOTCH3-201ENST00000263388 BPTFQ12830 3046 aa12.91□□□□□ -0.34
NOTCH3-201ENST00000263388 M0R378 163 aa12.91□□□□□ -0.34
NOTCH3-201ENST00000263388 C1orf229Q6ZS94 237 aaPredicted RBP12.91□□□□□ -0.34
NOTCH3-201ENST00000263388 C10orf25Q5T742 122 aa12.91□□□□□ -0.34
NOTCH3-201ENST00000263388 TRAV7A0A075B6U4 112 aa12.91□□□□□ -0.34
NOTCH3-201ENST00000263388 RETNQ9HD89 108 aa12.91□□□□□ -0.34
NOTCH3-201ENST00000263388 CCDC179H3BU77 68 aa12.9□□□□□ -0.34
NOTCH3-201ENST00000263388 RNASE3P12724 160 aaKnown RBP12.9□□□□□ -0.34
NOTCH3-201ENST00000263388 Q6ZVQ6 151 aa12.9□□□□□ -0.34
NOTCH3-201ENST00000263388 FAM30AQ9NZY2 134 aa12.9□□□□□ -0.34
NOTCH3-201ENST00000263388 KLLNB2CW77 178 aa12.9□□□□□ -0.34
NOTCH3-201ENST00000263388 WFDC13Q8IUB5 93 aa12.9□□□□□ -0.34
NOTCH3-201ENST00000263388 DCANP1Q8TF63 244 aa12.9□□□□□ -0.34
NOTCH3-201ENST00000263388 LINC00694P0DN24 101 aa12.9□□□□□ -0.35
NOTCH3-201ENST00000263388 SMIM11BQ8TCY0 68 aa12.9□□□□□ -0.35
NOTCH3-201ENST00000263388 PSMG3-AS1Q96PY0 264 aa12.9□□□□□ -0.35
NOTCH3-201ENST00000263388 IGKV2-28A0A075B6P5 120 aa12.89□□□□□ -0.35
NOTCH3-201ENST00000263388 IGKV2D-28P01615 120 aa12.89□□□□□ -0.35
NOTCH3-201ENST00000263388 Q6Q795 121 aa12.89□□□□□ -0.35
NOTCH3-201ENST00000263388 PRYO14603 147 aa12.89□□□□□ -0.35
NOTCH3-201ENST00000263388 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.89□□□□□ -0.35
NOTCH3-201ENST00000263388 LELP1Q5T871 98 aa12.88□□□□□ -0.35
NOTCH3-201ENST00000263388 SPINK6Q6UWN8 80 aa12.88□□□□□ -0.35
NOTCH3-201ENST00000263388 Q8N976 141 aa12.88□□□□□ -0.35
NOTCH3-201ENST00000263388 Q6JHZ5 121 aa12.88□□□□□ -0.35
NOTCH3-201ENST00000263388 MTORP42345 2549 aa12.87□□□□□ -0.35
NOTCH3-201ENST00000263388 RBX1P62877 108 aa12.87□□□□□ -0.35
NOTCH3-201ENST00000263388 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.87□□□□□ -0.35
NOTCH3-201ENST00000263388 IGLV4-69A0A075B6H9 119 aa12.87□□□□□ -0.35
NOTCH3-201ENST00000263388 PROK1P58294 105 aa12.87□□□□□ -0.35
NOTCH3-201ENST00000263388 TRAV10A0A0B4J240 114 aa12.86□□□□□ -0.35
NOTCH3-201ENST00000263388 C11orf71Q6IPW1 123 aa12.86□□□□□ -0.35
NOTCH3-201ENST00000263388 IGHV4-30-4P0DP06 118 aa12.86□□□□□ -0.35
NOTCH3-201ENST00000263388 WISP2O76076 250 aa12.85□□□□□ -0.35
NOTCH3-201ENST00000263388 KPRPQ5T749 579 aaPredicted RBP12.85□□□□□ -0.35
NOTCH3-201ENST00000263388 Q6ZQY7 126 aa12.85□□□□□ -0.35
NOTCH3-201ENST00000263388 MRGPRG-AS1Q2M3A8 158 aa12.85□□□□□ -0.35
NOTCH3-201ENST00000263388 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.84□□□□□ -0.35
NOTCH3-201ENST00000263388 Q8IZM0 81 aa12.84□□□□□ -0.35
NOTCH3-201ENST00000263388 C22orf34Q6ZV56 151 aa12.84□□□□□ -0.35
NOTCH3-201ENST00000263388 TRBV7-6A0A0J9YX20 115 aa12.84□□□□□ -0.35
NOTCH3-201ENST00000263388 PLA2G5P39877 138 aa12.83□□□□□ -0.35
NOTCH3-201ENST00000263388 BBC3Q96PG8 261 aaPredicted RBP12.83□□□□□ -0.36
NOTCH3-201ENST00000263388 PRR4Q16378 134 aa12.83□□□□□ -0.36
NOTCH3-201ENST00000263388 LOC107984640A0A0U1RRK4 108 aa12.83□□□□□ -0.36
NOTCH3-201ENST00000263388 HRCT1Q6UXD1 115 aa12.83□□□□□ -0.36
NOTCH3-201ENST00000263388 POLR2KP53803 58 aaKnown RBP12.83□□□□□ -0.36
NOTCH3-201ENST00000263388 ZNF73O43830 326 aaPredicted RBP12.82□□□□□ -0.36
NOTCH3-201ENST00000263388 SHISA2Q6UWI4 295 aa12.82□□□□□ -0.36
NOTCH3-201ENST00000263388 Q6ZSV7 163 aa12.82□□□□□ -0.36
NOTCH3-201ENST00000263388 LINC00959A0A1B0GUT2 108 aa12.82□□□□□ -0.36
NOTCH3-201ENST00000263388 ZNF462Q96JM2 2506 aa12.81□□□□□ -0.36
NOTCH3-201ENST00000263388 Q8N6K4 173 aa12.8□□□□□ -0.36
NOTCH3-201ENST00000263388 ESRGQ1W209 222 aa12.79□□□□□ -0.36
NOTCH3-201ENST00000263388 C19orf84I3L1E1 186 aa12.79□□□□□ -0.36
NOTCH3-201ENST00000263388 IGLV9-49A0A0B4J1Y8 123 aa12.79□□□□□ -0.36
NOTCH3-201ENST00000263388 INAFM1C9JVW0 142 aa12.79□□□□□ -0.36
NOTCH3-201ENST00000263388 A8MZ25 164 aa12.79□□□□□ -0.36
NOTCH3-201ENST00000263388 Q6ZS46 218 aa12.78□□□□□ -0.36
NOTCH3-201ENST00000263388 ZNF702PQ9H963 129 aa12.78□□□□□ -0.36
NOTCH3-201ENST00000263388 LINC00482Q8N8I6 264 aa12.78□□□□□ -0.36
NOTCH3-201ENST00000263388 CDC42SE2Q9NRR3 84 aa12.78□□□□□ -0.36
NOTCH3-201ENST00000263388 M0QXV9 152 aa12.77□□□□□ -0.36
NOTCH3-201ENST00000263388 PRR9Q5T870 116 aa12.77□□□□□ -0.37
NOTCH3-201ENST00000263388 IGLV1-40P01703 118 aa12.76□□□□□ -0.37
NOTCH3-201ENST00000263388 CLUHP3Q96NS8 147 aa12.76□□□□□ -0.37
NOTCH3-201ENST00000263388 XGP55808 180 aa12.76□□□□□ -0.37
NOTCH3-201ENST00000263388 CHD8Q9HCK8 2581 aa12.75□□□□□ -0.37
NOTCH3-201ENST00000263388 IGIPA6NJ69 53 aa12.75□□□□□ -0.37
NOTCH3-201ENST00000263388 USP24Q9UPU5 2620 aa12.75□□□□□ -0.37
NOTCH3-201ENST00000263388 RPL37AP8A6NKH3 93 aa12.74□□□□□ -0.37
NOTCH3-201ENST00000263388 CEP295Q9C0D2 2601 aa12.74□□□□□ -0.37
NOTCH3-201ENST00000263388 PPDPFQ9H3Y8 114 aa12.74□□□□□ -0.37
NOTCH3-201ENST00000263388 LINC00526Q96FQ7 95 aa12.73□□□□□ -0.37
NOTCH3-201ENST00000263388 C10orf99Q6UWK7 81 aa12.73□□□□□ -0.37
NOTCH3-201ENST00000263388 PLAC8L1A1L4L8 177 aa12.73□□□□□ -0.37
NOTCH3-201ENST00000263388 LOC100131303A0A0U1RQF7 123 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms