RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 K7EP13 123 aa10.05□□□□□ -0.8
CDH1-201ENST00000261769 FXYD2P54710 66 aa10.05□□□□□ -0.8
CDH1-201ENST00000261769 LINC01620Q4KN68 170 aa10.05□□□□□ -0.8
CDH1-201ENST00000261769 SPANXB1Q9NS25 103 aaPredicted RBP10.05□□□□□ -0.8
CDH1-201ENST00000261769 ACYP1P07311 99 aa10.04□□□□□ -0.8
CDH1-201ENST00000261769 MUC7Q8TAX7 377 aa10.04□□□□□ -0.8
CDH1-201ENST00000261769 FHL3Q13643 280 aa10.04□□□□□ -0.8
CDH1-201ENST00000261769 RBM3P98179 157 aaKnown RBP10.03□□□□□ -0.8
CDH1-201ENST00000261769 FHL2Q14192 279 aa10.03□□□□□ -0.8
CDH1-201ENST00000261769 FSHBP01225 129 aa10.03□□□□□ -0.8
CDH1-201ENST00000261769 CDC42SE2Q9NRR3 84 aa10.03□□□□□ -0.8
CDH1-201ENST00000261769 COX8CQ7Z4L0 72 aa10.02□□□□□ -0.81
CDH1-201ENST00000261769 PTH2Q96A98 100 aa10.01□□□□□ -0.81
CDH1-201ENST00000261769 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
CDH1-201ENST00000261769 LINC00308Q8TCZ7 52 aa10□□□□□ -0.81
CDH1-201ENST00000261769 A0A0B4J2C4 111 aa9.99□□□□□ -0.81
CDH1-201ENST00000261769 H3BT86 120 aa9.99□□□□□ -0.81
CDH1-201ENST00000261769 M0R378 163 aa9.99□□□□□ -0.81
CDH1-201ENST00000261769 C1orf134Q5TEV5 83 aa9.99□□□□□ -0.81
CDH1-201ENST00000261769 Q8IZM0 81 aa9.99□□□□□ -0.81
CDH1-201ENST00000261769 UBE2D1P51668 147 aa9.99□□□□□ -0.81
CDH1-201ENST00000261769 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
CDH1-201ENST00000261769 TIMM17BO60830 172 aa9.98□□□□□ -0.81
CDH1-201ENST00000261769 COX17Q14061 63 aa9.98□□□□□ -0.81
CDH1-201ENST00000261769 TRBV10-2A0A0K0K1G8 114 aa9.96□□□□□ -0.81
CDH1-201ENST00000261769 EGFEM1PQ0D2K5 195 aa9.96□□□□□ -0.81
CDH1-201ENST00000261769 CLEC2BQ92478 149 aa9.96□□□□□ -0.81
CDH1-201ENST00000261769 A0A096LNI7 61 aa9.96□□□□□ -0.82
CDH1-201ENST00000261769 CYSRT1A8MQ03 144 aa9.95□□□□□ -0.82
CDH1-201ENST00000261769 TET2Q6N021 2002 aaPredicted RBP9.95□□□□□ -0.82
CDH1-201ENST00000261769 TRAV23DV6A0A075B6W5 121 aa9.95□□□□□ -0.82
CDH1-201ENST00000261769 IGLV5-52A0A0A0MRZ9 124 aa9.94□□□□□ -0.82
CDH1-201ENST00000261769 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
CDH1-201ENST00000261769 LYPD5Q6UWN5 251 aa9.94□□□□□ -0.82
CDH1-201ENST00000261769 DHRS4-AS1Q9P1J3 65 aa9.94□□□□□ -0.82
CDH1-201ENST00000261769 CSDC2Q9Y534 153 aaKnown RBP9.94□□□□□ -0.82
CDH1-201ENST00000261769 TEN1Q86WV5 123 aa9.93□□□□□ -0.82
CDH1-201ENST00000261769 IGKV2-28A0A075B6P5 120 aa9.93□□□□□ -0.82
CDH1-201ENST00000261769 IGKV2D-28P01615 120 aa9.93□□□□□ -0.82
CDH1-201ENST00000261769 C6orf99Q4VX62 202 aa9.93□□□□□ -0.82
CDH1-201ENST00000261769 H0Y9J4 135 aa9.93□□□□□ -0.82
CDH1-201ENST00000261769 HELZ2Q9BYK8 2649 aaKnown RBP9.93□□□□□ -0.82
CDH1-201ENST00000261769 F8WDY8 70 aa9.92□□□□□ -0.82
CDH1-201ENST00000261769 LINC00242Q5T6M2 205 aa9.92□□□□□ -0.82
CDH1-201ENST00000261769 A0A1B0GUV1 79 aa9.92□□□□□ -0.82
CDH1-201ENST00000261769 USP17L23D6RBM5 183 aa9.92□□□□□ -0.82
CDH1-201ENST00000261769 GAS8-AS1O95177 125 aa9.92□□□□□ -0.82
CDH1-201ENST00000261769 IGIPA6NJ69 53 aa9.91□□□□□ -0.82
CDH1-201ENST00000261769 WFDC9Q8NEX5 89 aa9.91□□□□□ -0.82
CDH1-201ENST00000261769 A0A1B0GX51 115 aa9.91□□□□□ -0.82
CDH1-201ENST00000261769 MP68P56378 58 aa9.91□□□□□ -0.82
CDH1-201ENST00000261769 SS18L2Q9UHA2 77 aa9.9□□□□□ -0.82
CDH1-201ENST00000261769 A8MZ25 164 aa9.9□□□□□ -0.83
CDH1-201ENST00000261769 PCSK5Q92824 1860 aa9.89□□□□□ -0.83
CDH1-201ENST00000261769 IGKV2D-26A0A0A0MRZ7 120 aa9.89□□□□□ -0.83
CDH1-201ENST00000261769 PLAC8L1A1L4L8 177 aa9.89□□□□□ -0.83
CDH1-201ENST00000261769 IGLV4-60A0A075B6I1 120 aa9.89□□□□□ -0.83
CDH1-201ENST00000261769 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
CDH1-201ENST00000261769 WFDC10BQ8IUB3 73 aa9.89□□□□□ -0.83
CDH1-201ENST00000261769 RPL28P46779 137 aaKnown RBP9.88□□□□□ -0.83
CDH1-201ENST00000261769 YPEL4Q96NS1 127 aa9.88□□□□□ -0.83
CDH1-201ENST00000261769 PRRC2CQ9Y520 2896 aaKnown RBP9.88□□□□□ -0.83
CDH1-201ENST00000261769 AGRNO00468 2067 aa9.87□□□□□ -0.83
CDH1-201ENST00000261769 MAPKAPK5-AS1Q8N8E1 139 aa9.87□□□□□ -0.83
CDH1-201ENST00000261769 TP73-AS1Q9UF72 201 aa9.87□□□□□ -0.83
CDH1-201ENST00000261769 SBSPONQ8IVN8 264 aa9.86□□□□□ -0.83
CDH1-201ENST00000261769 MGAM2Q2M2H8 2515 aa9.86□□□□□ -0.83
CDH1-201ENST00000261769 M0QXV9 152 aa9.86□□□□□ -0.83
CDH1-201ENST00000261769 C11orf72Q8NBR9 251 aa9.86□□□□□ -0.83
CDH1-201ENST00000261769 C2orf48Q96LS8 159 aa9.86□□□□□ -0.83
CDH1-201ENST00000261769 TAX1BP3O14907 124 aa9.85□□□□□ -0.83
CDH1-201ENST00000261769 LINC00694P0DN24 101 aa9.85□□□□□ -0.83
CDH1-201ENST00000261769 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
CDH1-201ENST00000261769 BPY2O14599 106 aa9.85□□□□□ -0.83
CDH1-201ENST00000261769 C6orf223Q8N319 242 aa9.85□□□□□ -0.83
CDH1-201ENST00000261769 POM121L12Q8N7R1 296 aa9.85□□□□□ -0.83
CDH1-201ENST00000261769 MDFIQ99750 246 aa9.85□□□□□ -0.83
CDH1-201ENST00000261769 CELA1Q9UNI1 258 aa9.85□□□□□ -0.83
CDH1-201ENST00000261769 B5MCH6 92 aa9.85□□□□□ -0.83
CDH1-201ENST00000261769 H3BNG1 76 aa9.84□□□□□ -0.83
CDH1-201ENST00000261769 ZNF73O43830 326 aaPredicted RBP9.84□□□□□ -0.83
CDH1-201ENST00000261769 PPDPFQ9H3Y8 114 aa9.84□□□□□ -0.83
CDH1-201ENST00000261769 A0A096LNT2 108 aa9.84□□□□□ -0.83
CDH1-201ENST00000261769 SMIM1B2RUZ4 78 aa9.84□□□□□ -0.83
CDH1-201ENST00000261769 SMIM20Q8N5G0 67 aa9.84□□□□□ -0.83
CDH1-201ENST00000261769 Q6ZSN1 163 aa9.84□□□□□ -0.83
CDH1-201ENST00000261769 C14orf132Q9NPU4 83 aa9.83□□□□□ -0.84
CDH1-201ENST00000261769 IGKV3D-7A0A0C4DH55 119 aa9.83□□□□□ -0.84
CDH1-201ENST00000261769 WFDC2Q14508 124 aa9.83□□□□□ -0.84
CDH1-201ENST00000261769 KLK9Q2XQG4 91 aa9.82□□□□□ -0.84
CDH1-201ENST00000261769 Q6ZQY7 126 aa9.82□□□□□ -0.84
CDH1-201ENST00000261769 LINC01561Q8N1V8 128 aa9.82□□□□□ -0.84
CDH1-201ENST00000261769 WWC2-AS2Q96NR7 200 aa9.82□□□□□ -0.84
CDH1-201ENST00000261769 TCL1BO95988 128 aa9.82□□□□□ -0.84
CDH1-201ENST00000261769 LINC01556Q5JQF7 62 aa9.82□□□□□ -0.84
CDH1-201ENST00000261769 AMELXQ99217 191 aa9.81□□□□□ -0.84
CDH1-201ENST00000261769 SPATA3Q8NHX4 192 aa9.81□□□□□ -0.84
CDH1-201ENST00000261769 DNAH12Q6ZR08 3092 aa9.81□□□□□ -0.84
CDH1-201ENST00000261769 NDUFC2-KCTD14E9PQ53 114 aa9.81□□□□□ -0.84
CDH1-201ENST00000261769 X6R8D5 127 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms