RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 F8W735 103 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-201ENST00000260327 A0A087WYN8 130 aa7.16□□□□□ -1.26
CTDSPL2-201ENST00000260327 ADAMTSL4-AS1Q5T5F5 129 aa7.16□□□□□ -1.26
CTDSPL2-201ENST00000260327 TET2Q6N021 2002 aaPredicted RBP7.16□□□□□ -1.26
CTDSPL2-201ENST00000260327 TRAV7A0A075B6U4 112 aa7.16□□□□□ -1.26
CTDSPL2-201ENST00000260327 TMEM89A2RUT3 159 aa7.16□□□□□ -1.26
CTDSPL2-201ENST00000260327 C10orf142B7Z368 130 aa7.16□□□□□ -1.26
CTDSPL2-201ENST00000260327 PSPHP1O15172 72 aa7.16□□□□□ -1.26
CTDSPL2-201ENST00000260327 K7ERS5 55 aa7.15□□□□□ -1.26
CTDSPL2-201ENST00000260327 CRYGDP07320 174 aa7.15□□□□□ -1.26
CTDSPL2-201ENST00000260327 LOC100131303A0A0U1RQF7 123 aa7.15□□□□□ -1.27
CTDSPL2-201ENST00000260327 TNFRSF13BO14836 293 aaPredicted RBP7.15□□□□□ -1.27
CTDSPL2-201ENST00000260327 MRPS36P82909 103 aaKnown RBP7.15□□□□□ -1.27
CTDSPL2-201ENST00000260327 CASC2Q6XLA1 102 aa7.15□□□□□ -1.27
CTDSPL2-201ENST00000260327 IGKV2-28A0A075B6P5 120 aa7.15□□□□□ -1.27
CTDSPL2-201ENST00000260327 TRBV6-8A0A0A6YYG3 113 aa7.15□□□□□ -1.27
CTDSPL2-201ENST00000260327 IGKV2D-28P01615 120 aa7.15□□□□□ -1.27
CTDSPL2-201ENST00000260327 CNFNQ9BYD5 112 aa7.15□□□□□ -1.27
CTDSPL2-201ENST00000260327 CCL18P55774 89 aa7.14□□□□□ -1.27
CTDSPL2-201ENST00000260327 Q8N6K4 173 aa7.14□□□□□ -1.27
CTDSPL2-201ENST00000260327 C9orf85Q96MD7 179 aa7.14□□□□□ -1.27
CTDSPL2-201ENST00000260327 HILS1P60008 231 aa7.13□□□□□ -1.27
CTDSPL2-201ENST00000260327 HIVEP3Q5T1R4 2406 aa7.13□□□□□ -1.27
CTDSPL2-201ENST00000260327 C9orf66Q5T8R8 295 aa7.13□□□□□ -1.27
CTDSPL2-201ENST00000260327 FAM19A1Q7Z5A9 133 aa7.13□□□□□ -1.27
CTDSPL2-201ENST00000260327 PRR15LQ9BU68 103 aa7.13□□□□□ -1.27
CTDSPL2-201ENST00000260327 EXPH5Q8NEV8 1989 aa7.13□□□□□ -1.27
CTDSPL2-201ENST00000260327 C4orf26Q17RF5 130 aa7.13□□□□□ -1.27
CTDSPL2-201ENST00000260327 EDN2P20800 178 aa7.13□□□□□ -1.27
CTDSPL2-201ENST00000260327 DEFB114Q30KQ6 69 aa7.12□□□□□ -1.27
CTDSPL2-201ENST00000260327 PLA2G2AP14555 144 aa7.12□□□□□ -1.27
CTDSPL2-201ENST00000260327 FSTL3O95633 263 aa7.12□□□□□ -1.27
CTDSPL2-201ENST00000260327 C11orf71Q6IPW1 123 aa7.12□□□□□ -1.27
CTDSPL2-201ENST00000260327 NTM-AS1Q6ZSK4 140 aa7.12□□□□□ -1.27
CTDSPL2-201ENST00000260327 HIVEP2P31629 2446 aa7.12□□□□□ -1.27
CTDSPL2-201ENST00000260327 AGRNO00468 2067 aa7.12□□□□□ -1.27
CTDSPL2-201ENST00000260327 KLLNB2CW77 178 aa7.12□□□□□ -1.27
CTDSPL2-201ENST00000260327 COX6A2Q02221 97 aa7.11□□□□□ -1.27
CTDSPL2-201ENST00000260327 MYO9AB2RTY4 2548 aa7.11□□□□□ -1.27
CTDSPL2-201ENST00000260327 SMCPP49901 116 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-201ENST00000260327 PRR3P79522 188 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-201ENST00000260327 MYO18BQ8IUG5 2567 aa7.11□□□□□ -1.27
CTDSPL2-201ENST00000260327 COL5A1P20908 1838 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-201ENST00000260327 IGHV4-30-4P0DP06 118 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 IGHV4-31P0DP07 118 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 KIR2DL5BQ8NHK3 375 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 RAI1Q7Z5J4 1906 aaPredicted RBP7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 PRYO14603 147 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 C18orf65Q6ZTR6 163 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 Q8N3U1 123 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 LINC00846Q9NV44 126 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 DNAJC9-AS1A6NH13 148 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 LINC00242Q5T6M2 205 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 CCDC168Q8NDH2 2452 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 IGF2RP11717 2491 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 ZNF843Q8N446 348 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 B9D2Q9BPU9 175 aa7.1□□□□□ -1.27
CTDSPL2-201ENST00000260327 LINC00959A0A1B0GUT2 108 aa7.09□□□□□ -1.27
CTDSPL2-201ENST00000260327 CDSNQ15517 529 aa7.09□□□□□ -1.27
CTDSPL2-201ENST00000260327 IGLV2-18A0A075B6J9 118 aa7.09□□□□□ -1.28
CTDSPL2-201ENST00000260327 Q8N814 137 aa7.09□□□□□ -1.28
CTDSPL2-201ENST00000260327 TLN1Q9Y490 2541 aaKnown RBP7.09□□□□□ -1.28
CTDSPL2-201ENST00000260327 Q6YL49 198 aa7.08□□□□□ -1.28
CTDSPL2-201ENST00000260327 ABCA2Q9BZC7 2435 aa7.08□□□□□ -1.28
CTDSPL2-201ENST00000260327 TRBV7-6A0A0J9YX20 115 aa7.08□□□□□ -1.28
CTDSPL2-201ENST00000260327 RPL28P46779 137 aaKnown RBP7.08□□□□□ -1.28
CTDSPL2-201ENST00000260327 ADAMTS20P59510 1910 aa7.08□□□□□ -1.28
CTDSPL2-201ENST00000260327 SMIM1B2RUZ4 78 aa7.08□□□□□ -1.28
CTDSPL2-201ENST00000260327 TRBV7-7A0A0K0K1E9 115 aa7.08□□□□□ -1.28
CTDSPL2-201ENST00000260327 BBC3Q96PG8 261 aaPredicted RBP7.08□□□□□ -1.28
CTDSPL2-201ENST00000260327 RPL37AP8A6NKH3 93 aa7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 C9orf116Q5BN46 136 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 CDC42SE2Q9NRR3 84 aa7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 PTPRBP23467 1997 aa7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 TRBV6-4A0A1B0GX49 114 aa7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 ZNF73O43830 326 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 LYRM9A8MSI8 78 aa7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 PSMG3-AS1Q96PY0 264 aa7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 J3QKU1 62 aa7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 WFDC10AQ9H1F0 79 aa7.07□□□□□ -1.28
CTDSPL2-201ENST00000260327 LINC00208Q96KT6 92 aa7.06□□□□□ -1.28
CTDSPL2-201ENST00000260327 PRO0461Q9UI25 63 aa7.06□□□□□ -1.28
CTDSPL2-201ENST00000260327 CD164L2Q6UWJ8 174 aa7.06□□□□□ -1.28
CTDSPL2-201ENST00000260327 Q8N9L7 120 aa7.06□□□□□ -1.28
CTDSPL2-201ENST00000260327 NAV2Q8IVL1 2488 aa7.05□□□□□ -1.28
CTDSPL2-201ENST00000260327 BEAN1Q3B7T3 259 aa7.05□□□□□ -1.28
CTDSPL2-201ENST00000260327 CHCHD7Q9BUK0 85 aa7.05□□□□□ -1.28
CTDSPL2-201ENST00000260327 PRRC2AP48634 2157 aaKnown RBP7.05□□□□□ -1.28
CTDSPL2-201ENST00000260327 M0R378 163 aa7.04□□□□□ -1.28
CTDSPL2-201ENST00000260327 LINC00482Q8N8I6 264 aa7.04□□□□□ -1.28
CTDSPL2-201ENST00000260327 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.04□□□□□ -1.28
CTDSPL2-201ENST00000260327 IGLV1-40P01703 118 aa7.04□□□□□ -1.28
CTDSPL2-201ENST00000260327 TMEM254Q8TBM7 123 aa7.04□□□□□ -1.28
CTDSPL2-201ENST00000260327 A0A087WZ39 114 aa7.03□□□□□ -1.28
CTDSPL2-201ENST00000260327 SPINK6Q6UWN8 80 aa7.03□□□□□ -1.28
CTDSPL2-201ENST00000260327 MRGPRG-AS1Q2M3A8 158 aa7.03□□□□□ -1.28
CTDSPL2-201ENST00000260327 SYCNQ0VAF6 134 aa7.03□□□□□ -1.28
CTDSPL2-201ENST00000260327 ZNF702PQ9H963 129 aa7.03□□□□□ -1.28
CTDSPL2-201ENST00000260327 SERTAD4-AS1Q5TG53 156 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms