RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 WFDC2Q14508 124 aa9.29□□□□□ -0.92
VPS25-201ENST00000253794 HSPB8Q9UJY1 196 aa9.29□□□□□ -0.92
VPS25-201ENST00000253794 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
VPS25-201ENST00000253794 TINCRA0A1B0GVN0 87 aa9.28□□□□□ -0.92
VPS25-201ENST00000253794 HERVK_113P63121 156 aa9.28□□□□□ -0.92
VPS25-201ENST00000253794 LINC01561Q8N1V8 128 aa9.28□□□□□ -0.92
VPS25-201ENST00000253794 DNAH5Q8TE73 4624 aa9.27□□□□□ -0.93
VPS25-201ENST00000253794 A0A087WZ39 114 aa9.27□□□□□ -0.93
VPS25-201ENST00000253794 USP17L23D6RBM5 183 aa9.27□□□□□ -0.93
VPS25-201ENST00000253794 COX7A2LO14548 114 aa9.27□□□□□ -0.93
VPS25-201ENST00000253794 EREGO14944 169 aa9.27□□□□□ -0.93
VPS25-201ENST00000253794 IGLC3P0DOY3 106 aa9.27□□□□□ -0.93
VPS25-201ENST00000253794 C14orf177Q52M58 125 aa9.27□□□□□ -0.93
VPS25-201ENST00000253794 Q8N814 137 aa9.27□□□□□ -0.93
VPS25-201ENST00000253794 C15orf56Q8N910 161 aa9.27□□□□□ -0.93
VPS25-201ENST00000253794 IGLV4-69A0A075B6H9 119 aa9.26□□□□□ -0.93
VPS25-201ENST00000253794 GVQW2A0A096LPI5 108 aaPredicted RBP9.26□□□□□ -0.93
VPS25-201ENST00000253794 A0A0J9YXV3 536 aa9.26□□□□□ -0.93
VPS25-201ENST00000253794 COX6A2Q02221 97 aa9.26□□□□□ -0.93
VPS25-201ENST00000253794 CFAP161Q6P656 301 aa9.26□□□□□ -0.93
VPS25-201ENST00000253794 PKHD1P08F94 4074 aa9.26□□□□□ -0.93
VPS25-201ENST00000253794 IGHV1-58A0A0C4DH39 117 aa9.25□□□□□ -0.93
VPS25-201ENST00000253794 PRSS1P07477 247 aa9.25□□□□□ -0.93
VPS25-201ENST00000253794 NTN5Q8WTR8 489 aaPredicted RBP9.25□□□□□ -0.93
VPS25-201ENST00000253794 LECT2O14960 151 aa9.24□□□□□ -0.93
VPS25-201ENST00000253794 FABP4P15090 132 aa9.24□□□□□ -0.93
VPS25-201ENST00000253794 SPATA12Q7Z6I5 190 aa9.24□□□□□ -0.93
VPS25-201ENST00000253794 C5orf38Q86SI9 138 aa9.24□□□□□ -0.93
VPS25-201ENST00000253794 HIST3H2BBQ8N257 126 aa9.24□□□□□ -0.93
VPS25-201ENST00000253794 GEMIN7Q9H840 131 aaKnown RBP9.24□□□□□ -0.93
VPS25-201ENST00000253794 F8VRH5 84 aa9.23□□□□□ -0.93
VPS25-201ENST00000253794 APOMO95445 188 aa9.23□□□□□ -0.93
VPS25-201ENST00000253794 S100A6P06703 90 aa9.23□□□□□ -0.93
VPS25-201ENST00000253794 ODF1Q14990 250 aa9.23□□□□□ -0.93
VPS25-201ENST00000253794 CDPF1Q6NVV7 123 aa9.23□□□□□ -0.93
VPS25-201ENST00000253794 OR10D4PQ8NGN7 298 aa9.23□□□□□ -0.93
VPS25-201ENST00000253794 MAP1LC3CQ9BXW4 147 aa9.23□□□□□ -0.93
VPS25-201ENST00000253794 CHTOPQ9Y3Y2 248 aaKnown RBP9.23□□□□□ -0.93
VPS25-201ENST00000253794 IGHV3-64A0A075B6Q5 118 aa9.22□□□□□ -0.93
VPS25-201ENST00000253794 C5orf52A6NGY3 159 aa9.22□□□□□ -0.93
VPS25-201ENST00000253794 MALP21145 153 aa9.22□□□□□ -0.93
VPS25-201ENST00000253794 CNBPP62633 177 aaKnown RBP9.22□□□□□ -0.93
VPS25-201ENST00000253794 CHAC1Q9BUX1 264 aa9.22□□□□□ -0.93
VPS25-201ENST00000253794 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
VPS25-201ENST00000253794 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
VPS25-201ENST00000253794 DYNC1H1Q14204 4646 aaKnown RBP9.22□□□□□ -0.93
VPS25-201ENST00000253794 C11orf86A6NJI1 115 aa9.21□□□□□ -0.94
VPS25-201ENST00000253794 SYS1-DBNDD2H3BUS1 97 aa9.21□□□□□ -0.94
VPS25-201ENST00000253794 KRTAP10-2P60368 255 aa9.21□□□□□ -0.94
VPS25-201ENST00000253794 LINC00469Q8N7U9 141 aa9.21□□□□□ -0.94
VPS25-201ENST00000253794 MRPL35Q9NZE8 188 aaKnown RBP9.21□□□□□ -0.94
VPS25-201ENST00000253794 ZNF22P17026 224 aaPredicted RBP9.2□□□□□ -0.94
VPS25-201ENST00000253794 HIST1H2BLQ99880 126 aa9.2□□□□□ -0.94
VPS25-201ENST00000253794 EPPK1P58107 5090 aaKnown RBP9.2□□□□□ -0.94
VPS25-201ENST00000253794 hDV102S1A0JD36 115 aa9.19□□□□□ -0.94
VPS25-201ENST00000253794 SMIM1B2RUZ4 78 aa9.19□□□□□ -0.94
VPS25-201ENST00000253794 F8WDY8 70 aa9.19□□□□□ -0.94
VPS25-201ENST00000253794 SNRPEP62304 92 aaKnown RBP9.19□□□□□ -0.94
VPS25-201ENST00000253794 PET117Q6UWS5 81 aa9.19□□□□□ -0.94
VPS25-201ENST00000253794 C2orf48Q96LS8 159 aa9.19□□□□□ -0.94
VPS25-201ENST00000253794 LRP1BQ9NZR2 4599 aa9.19□□□□□ -0.94
VPS25-201ENST00000253794 H3BRM9 83 aa9.18□□□□□ -0.94
VPS25-201ENST00000253794 SLPIP03973 132 aa9.18□□□□□ -0.94
VPS25-201ENST00000253794 C3orf79P0CE67 100 aa9.18□□□□□ -0.94
VPS25-201ENST00000253794 PLNP26678 52 aa9.18□□□□□ -0.94
VPS25-201ENST00000253794 KIAA0087Q14695 138 aa9.18□□□□□ -0.94
VPS25-201ENST00000253794 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
VPS25-201ENST00000253794 ORAOV1Q8WV07 137 aa9.18□□□□□ -0.94
VPS25-201ENST00000253794 IGLV5-39A0A0G2JS06 123 aa9.17□□□□□ -0.94
VPS25-201ENST00000253794 ZNF561-AS1K7EIQ3 104 aa9.17□□□□□ -0.94
VPS25-201ENST00000253794 S100A2P29034 98 aa9.17□□□□□ -0.94
VPS25-201ENST00000253794 SPAG11BQ08648 103 aa9.17□□□□□ -0.94
VPS25-201ENST00000253794 HIGD2BQ4VC39 106 aa9.17□□□□□ -0.94
VPS25-201ENST00000253794 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.16□□□□□ -0.94
VPS25-201ENST00000253794 IGLV5-52A0A0A0MRZ9 124 aa9.16□□□□□ -0.94
VPS25-201ENST00000253794 H0Y8G0 127 aa9.16□□□□□ -0.94
VPS25-201ENST00000253794 DPM2O94777 84 aa9.16□□□□□ -0.94
VPS25-201ENST00000253794 Q8IZM0 81 aa9.16□□□□□ -0.94
VPS25-201ENST00000253794 DNAH8Q96JB1 4490 aa9.15□□□□□ -0.94
VPS25-201ENST00000253794 C9orf163Q8N9P6 203 aa9.15□□□□□ -0.94
VPS25-201ENST00000253794 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.14□□□□□ -0.95
VPS25-201ENST00000253794 TMEM223A0PJW6 202 aa9.14□□□□□ -0.95
VPS25-201ENST00000253794 IGKCP01834 107 aa9.14□□□□□ -0.95
VPS25-201ENST00000253794 TMEM170BQ5T4T1 132 aa9.14□□□□□ -0.95
VPS25-201ENST00000253794 SPINK8P0C7L1 97 aa9.13□□□□□ -0.95
VPS25-201ENST00000253794 KRTDAPP60985 99 aa9.13□□□□□ -0.95
VPS25-201ENST00000253794 GCSHP23434 173 aa9.12□□□□□ -0.95
VPS25-201ENST00000253794 CXCL5P42830 114 aa9.12□□□□□ -0.95
VPS25-201ENST00000253794 AKR1D1P51857 326 aa9.12□□□□□ -0.95
VPS25-201ENST00000253794 SYCNQ0VAF6 134 aa9.12□□□□□ -0.95
VPS25-201ENST00000253794 RNF151Q2KHN1 245 aa9.12□□□□□ -0.95
VPS25-201ENST00000253794 COX7B2Q8TF08 81 aa9.12□□□□□ -0.95
VPS25-201ENST00000253794 LINC00526Q96FQ7 95 aa9.12□□□□□ -0.95
VPS25-201ENST00000253794 CARD19Q96LW7 228 aa9.12□□□□□ -0.95
VPS25-201ENST00000253794 PMCHL2Q9BQD1 86 aa9.12□□□□□ -0.95
VPS25-201ENST00000253794 C20orf202A1L168 122 aa9.11□□□□□ -0.95
VPS25-201ENST00000253794 NDUFA1O15239 70 aa9.11□□□□□ -0.95
VPS25-201ENST00000253794 PRSS2P07478 247 aa9.11□□□□□ -0.95
VPS25-201ENST00000253794 FUSP35637 526 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS25-201ENST00000253794 Q6ZRU5 148 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms