RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 TRAV12-1A0A0B4J245 112 aa13.35□□□□□ -0.27
SNRPA-201ENST00000243563 SYS1-DBNDD2H3BUS1 97 aa13.35□□□□□ -0.27
SNRPA-201ENST00000243563 KRTDAPP60985 99 aa13.35□□□□□ -0.27
SNRPA-201ENST00000243563 WFDC2Q14508 124 aa13.35□□□□□ -0.27
SNRPA-201ENST00000243563 MAP1LC3CQ9BXW4 147 aa13.35□□□□□ -0.27
SNRPA-201ENST00000243563 MRPL35Q9NZE8 188 aaKnown RBP13.35□□□□□ -0.27
SNRPA-201ENST00000243563 CHTOPQ9Y3Y2 248 aaKnown RBP13.34□□□□□ -0.27
SNRPA-201ENST00000243563 IGHV3OR16-9A0A0B4J2B5 98 aa13.33□□□□□ -0.28
SNRPA-201ENST00000243563 CD164L2Q6UWJ8 174 aa13.33□□□□□ -0.28
SNRPA-201ENST00000243563 FAT2Q9NYQ8 4349 aa13.33□□□□□ -0.28
SNRPA-201ENST00000243563 C11orf86A6NJI1 115 aa13.32□□□□□ -0.28
SNRPA-201ENST00000243563 IGLC3P0DOY3 106 aa13.32□□□□□ -0.28
SNRPA-201ENST00000243563 C5orf38Q86SI9 138 aa13.32□□□□□ -0.28
SNRPA-201ENST00000243563 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
SNRPA-201ENST00000243563 RMI2Q96E14 147 aa13.32□□□□□ -0.28
SNRPA-201ENST00000243563 LECT2O14960 151 aa13.31□□□□□ -0.28
SNRPA-201ENST00000243563 CHAC1Q9BUX1 264 aa13.31□□□□□ -0.28
SNRPA-201ENST00000243563 TINCRA0A1B0GVN0 87 aa13.31□□□□□ -0.28
SNRPA-201ENST00000243563 CDKN2A-AS1Q9UH64 79 aa13.31□□□□□ -0.28
SNRPA-201ENST00000243563 F8VRH5 84 aa13.3□□□□□ -0.28
SNRPA-201ENST00000243563 TM2D2Q9BX73 214 aa13.3□□□□□ -0.28
SNRPA-201ENST00000243563 LRCOL1A6NCL2 159 aa13.29□□□□□ -0.28
SNRPA-201ENST00000243563 PSCAO43653 123 aa13.29□□□□□ -0.28
SNRPA-201ENST00000243563 OR10D4PQ8NGN7 298 aa13.29□□□□□ -0.28
SNRPA-201ENST00000243563 IGLV5-45A0A087WSX0 123 aa13.28□□□□□ -0.28
SNRPA-201ENST00000243563 ZNF22P17026 224 aaPredicted RBP13.28□□□□□ -0.28
SNRPA-201ENST00000243563 TNP2Q05952 138 aa13.28□□□□□ -0.28
SNRPA-201ENST00000243563 LINC01545Q5VT33 79 aa13.28□□□□□ -0.28
SNRPA-201ENST00000243563 HERVK_113P63121 156 aa13.28□□□□□ -0.28
SNRPA-201ENST00000243563 PET117Q6UWS5 81 aa13.28□□□□□ -0.28
SNRPA-201ENST00000243563 C15orf56Q8N910 161 aa13.28□□□□□ -0.28
SNRPA-201ENST00000243563 GEMIN7Q9H840 131 aaKnown RBP13.28□□□□□ -0.28
SNRPA-201ENST00000243563 COX7A2LO14548 114 aa13.27□□□□□ -0.29
SNRPA-201ENST00000243563 LINC00469Q8N7U9 141 aa13.27□□□□□ -0.29
SNRPA-201ENST00000243563 COX11Q9Y6N1 276 aa13.27□□□□□ -0.29
SNRPA-201ENST00000243563 A0A087WZ39 114 aa13.25□□□□□ -0.29
SNRPA-201ENST00000243563 USP17L23D6RBM5 183 aa13.25□□□□□ -0.29
SNRPA-201ENST00000243563 DNAH11Q96DT5 4516 aa13.24□□□□□ -0.29
SNRPA-201ENST00000243563 SPINK8P0C7L1 97 aa13.24□□□□□ -0.29
SNRPA-201ENST00000243563 SEC11AP67812 179 aa13.24□□□□□ -0.29
SNRPA-201ENST00000243563 A0A087WTM6 91 aa13.23□□□□□ -0.29
SNRPA-201ENST00000243563 DPM2O94777 84 aa13.23□□□□□ -0.29
SNRPA-201ENST00000243563 LINC00526Q96FQ7 95 aa13.23□□□□□ -0.29
SNRPA-201ENST00000243563 SMIM1B2RUZ4 78 aa13.22□□□□□ -0.29
SNRPA-201ENST00000243563 HIGD2BQ4VC39 106 aa13.22□□□□□ -0.29
SNRPA-201ENST00000243563 TMEM170BQ5T4T1 132 aa13.22□□□□□ -0.29
SNRPA-201ENST00000243563 ATOH7Q8N100 152 aa13.22□□□□□ -0.29
SNRPA-201ENST00000243563 IGKCP01834 107 aa13.21□□□□□ -0.29
SNRPA-201ENST00000243563 IGHV3-64A0A075B6Q5 118 aa13.21□□□□□ -0.3
SNRPA-201ENST00000243563 MALP21145 153 aa13.21□□□□□ -0.3
SNRPA-201ENST00000243563 FUSP35637 526 aaKnown RBP eCLIP13.21□□□□□ -0.3
SNRPA-201ENST00000243563 PKD1P98161 4303 aa13.21□□□□□ -0.3
SNRPA-201ENST00000243563 PLNP26678 52 aa13.2□□□□□ -0.3
SNRPA-201ENST00000243563 TMEM223A0PJW6 202 aa13.19□□□□□ -0.3
SNRPA-201ENST00000243563 ORAOV1Q8WV07 137 aa13.19□□□□□ -0.3
SNRPA-201ENST00000243563 IGHV1-58A0A0C4DH39 117 aa13.18□□□□□ -0.3
SNRPA-201ENST00000243563 KIAA0087Q14695 138 aa13.17□□□□□ -0.3
SNRPA-201ENST00000243563 GVQW2A0A096LPI5 108 aaPredicted RBP13.17□□□□□ -0.3
SNRPA-201ENST00000243563 SLPIP03973 132 aa13.17□□□□□ -0.3
SNRPA-201ENST00000243563 LINC01561Q8N1V8 128 aa13.17□□□□□ -0.3
SNRPA-201ENST00000243563 NTN5Q8WTR8 489 aaPredicted RBP13.17□□□□□ -0.3
SNRPA-201ENST00000243563 IGLV5-39A0A0G2JS06 123 aa13.16□□□□□ -0.3
SNRPA-201ENST00000243563 C20orf202A1L168 122 aa13.16□□□□□ -0.3
SNRPA-201ENST00000243563 H3BRM9 83 aa13.16□□□□□ -0.3
SNRPA-201ENST00000243563 MAJINQ3KP22 176 aa13.16□□□□□ -0.3
SNRPA-201ENST00000243563 STPG4Q8N801 248 aa13.16□□□□□ -0.3
SNRPA-201ENST00000243563 Q8N814 137 aa13.16□□□□□ -0.3
SNRPA-201ENST00000243563 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.15□□□□□ -0.3
SNRPA-201ENST00000243563 hDV102S1A0JD36 115 aa13.15□□□□□ -0.3
SNRPA-201ENST00000243563 SCGB1D1O95968 90 aa13.15□□□□□ -0.3
SNRPA-201ENST00000243563 SPAG11BQ08648 103 aa13.15□□□□□ -0.3
SNRPA-201ENST00000243563 TOMM7Q9P0U1 55 aa13.14□□□□□ -0.31
SNRPA-201ENST00000243563 LOC105371267A0A1B0GV96 52 aa13.13□□□□□ -0.31
SNRPA-201ENST00000243563 APOMO95445 188 aa13.13□□□□□ -0.31
SNRPA-201ENST00000243563 HECTD4Q9Y4D8 3996 aa13.13□□□□□ -0.31
SNRPA-201ENST00000243563 TSPEAR-AS2P59090 65 aa13.13□□□□□ -0.31
SNRPA-201ENST00000243563 KRTAP10-2P60368 255 aa13.13□□□□□ -0.31
SNRPA-201ENST00000243563 JOSD1Q15040 202 aaPredicted RBP13.13□□□□□ -0.31
SNRPA-201ENST00000243563 PYY3Q5JQD4 70 aa13.13□□□□□ -0.31
SNRPA-201ENST00000243563 CDPF1Q6NVV7 123 aa13.13□□□□□ -0.31
SNRPA-201ENST00000243563 CFAP161Q6P656 301 aa13.13□□□□□ -0.31
SNRPA-201ENST00000243563 AKR1D1P51857 326 aa13.12□□□□□ -0.31
SNRPA-201ENST00000243563 LINC00336Q6ZUF6 198 aa13.12□□□□□ -0.31
SNRPA-201ENST00000243563 DNAH5Q8TE73 4624 aa13.12□□□□□ -0.31
SNRPA-201ENST00000243563 A0A1B0GVY2 172 aa13.11□□□□□ -0.31
SNRPA-201ENST00000243563 ANKRD39Q53RE8 183 aa13.11□□□□□ -0.31
SNRPA-201ENST00000243563 C2orf82Q6UX34 121 aa13.11□□□□□ -0.31
SNRPA-201ENST00000243563 C10orf25Q5T742 122 aa13.1□□□□□ -0.31
SNRPA-201ENST00000243563 COX7B2Q8TF08 81 aa13.1□□□□□ -0.31
SNRPA-201ENST00000243563 IGKV2D-26A0A0A0MRZ7 120 aa13.1□□□□□ -0.31
SNRPA-201ENST00000243563 Q8IZM0 81 aa13.1□□□□□ -0.31
SNRPA-201ENST00000243563 ZNF561-AS1K7EIQ3 104 aa13.09□□□□□ -0.31
SNRPA-201ENST00000243563 LINC01620Q4KN68 170 aa13.07□□□□□ -0.32
SNRPA-201ENST00000243563 C14orf177Q52M58 125 aa13.07□□□□□ -0.32
SNRPA-201ENST00000243563 UNQ6190/PRO20217Q6UXQ8 127 aa13.07□□□□□ -0.32
SNRPA-201ENST00000243563 Q6ZRU5 148 aa13.07□□□□□ -0.32
SNRPA-201ENST00000243563 E9PLD3 99 aa13.06□□□□□ -0.32
SNRPA-201ENST00000243563 LEPROTO15243 131 aa13.06□□□□□ -0.32
SNRPA-201ENST00000243563 C6orf226Q5I0X4 101 aa13.06□□□□□ -0.32
SNRPA-201ENST00000243563 C2orf48Q96LS8 159 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms