RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 ZNF815PA8K554 130 aa11.94□□□□□ -0.5
HOXC6-201ENST00000243108 TSPEAR-AS2P59090 65 aa11.94□□□□□ -0.5
HOXC6-201ENST00000243108 HERC2O95714 4834 aa11.94□□□□□ -0.5
HOXC6-201ENST00000243108 F5H768 121 aa11.94□□□□□ -0.5
HOXC6-201ENST00000243108 LEPROTO15243 131 aa11.94□□□□□ -0.5
HOXC6-201ENST00000243108 GYPEP15421 78 aa11.94□□□□□ -0.5
HOXC6-201ENST00000243108 TAL2Q16559 108 aa11.94□□□□□ -0.5
HOXC6-201ENST00000243108 FAM19A3Q7Z5A8 133 aa11.94□□□□□ -0.5
HOXC6-201ENST00000243108 RTL8CO15255 209 aa11.93□□□□□ -0.5
HOXC6-201ENST00000243108 ATP5G1P05496 136 aa11.93□□□□□ -0.5
HOXC6-201ENST00000243108 ZNF25P17030 456 aaPredicted RBP11.93□□□□□ -0.5
HOXC6-201ENST00000243108 UBE2DNLQ8IWF7 75 aa11.93□□□□□ -0.5
HOXC6-201ENST00000243108 CDC42SE2Q9NRR3 84 aa11.93□□□□□ -0.5
HOXC6-201ENST00000243108 J3QQQ9 107 aa11.92□□□□□ -0.5
HOXC6-201ENST00000243108 UBE2L6O14933 153 aa11.92□□□□□ -0.5
HOXC6-201ENST00000243108 TIRAPP58753 221 aa11.92□□□□□ -0.5
HOXC6-201ENST00000243108 Q6ZR54 194 aa11.92□□□□□ -0.5
HOXC6-201ENST00000243108 OR5A1Q8NGJ0 315 aa11.92□□□□□ -0.5
HOXC6-201ENST00000243108 KIAA1109Q2LD37 5005 aa11.92□□□□□ -0.5
HOXC6-201ENST00000243108 IGLV5-45A0A087WSX0 123 aa11.91□□□□□ -0.5
HOXC6-201ENST00000243108 ATP6V0E2Q8NHE4 81 aa11.91□□□□□ -0.5
HOXC6-201ENST00000243108 TM2D2Q9BX73 214 aa11.91□□□□□ -0.5
HOXC6-201ENST00000243108 DYNC1H1Q14204 4646 aaKnown RBP11.91□□□□□ -0.5
HOXC6-201ENST00000243108 TAX1BP3O14907 124 aa11.91□□□□□ -0.5
HOXC6-201ENST00000243108 PAX4O43316 350 aa11.91□□□□□ -0.5
HOXC6-201ENST00000243108 AMMECR1LQ6DCA0 310 aa11.91□□□□□ -0.5
HOXC6-201ENST00000243108 C15orf53Q8NAA6 179 aa11.91□□□□□ -0.5
HOXC6-201ENST00000243108 PLEKHB2Q96CS7 222 aa11.91□□□□□ -0.5
HOXC6-201ENST00000243108 COX11Q9Y6N1 276 aa11.91□□□□□ -0.5
HOXC6-201ENST00000243108 A0A1B0GVY2 172 aa11.9□□□□□ -0.5
HOXC6-201ENST00000243108 A6NDN8 102 aa11.9□□□□□ -0.5
HOXC6-201ENST00000243108 CEND1Q8N111 149 aa11.9□□□□□ -0.5
HOXC6-201ENST00000243108 TMEM101Q96IK0 257 aa11.9□□□□□ -0.5
HOXC6-201ENST00000243108 LGALS3P17931 250 aaKnown RBP11.89□□□□□ -0.51
HOXC6-201ENST00000243108 VSIG2Q96IQ7 327 aa11.89□□□□□ -0.51
HOXC6-201ENST00000243108 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
HOXC6-201ENST00000243108 DNAH11Q96DT5 4516 aa11.89□□□□□ -0.51
HOXC6-201ENST00000243108 GCSHP23434 173 aa11.89□□□□□ -0.51
HOXC6-201ENST00000243108 IGHV1-58A0A0C4DH39 117 aa11.88□□□□□ -0.51
HOXC6-201ENST00000243108 FXYD2P54710 66 aa11.88□□□□□ -0.51
HOXC6-201ENST00000243108 HERVK_113P63121 156 aa11.88□□□□□ -0.51
HOXC6-201ENST00000243108 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
HOXC6-201ENST00000243108 SCGB1D4Q6XE38 83 aa11.88□□□□□ -0.51
HOXC6-201ENST00000243108 LINC00336Q6ZUF6 198 aa11.88□□□□□ -0.51
HOXC6-201ENST00000243108 LINC00469Q8N7U9 141 aa11.88□□□□□ -0.51
HOXC6-201ENST00000243108 A0A0J9YY99 117 aa11.87□□□□□ -0.51
HOXC6-201ENST00000243108 IGHV3-30-3P0DP02 117 aa11.87□□□□□ -0.51
HOXC6-201ENST00000243108 GAGE6Q13070 117 aa11.87□□□□□ -0.51
HOXC6-201ENST00000243108 Q6ZVH6 145 aa11.87□□□□□ -0.51
HOXC6-201ENST00000243108 HIST1H4GQ99525 98 aa11.87□□□□□ -0.51
HOXC6-201ENST00000243108 IGHV3-64A0A075B6Q5 118 aa11.86□□□□□ -0.51
HOXC6-201ENST00000243108 CHCHD5Q9BSY4 110 aa11.86□□□□□ -0.51
HOXC6-201ENST00000243108 CDKN2A-AS1Q9UH64 79 aa11.86□□□□□ -0.51
HOXC6-201ENST00000243108 TRAV26-1A0A087WT03 109 aa11.86□□□□□ -0.51
HOXC6-201ENST00000243108 COX6A2Q02221 97 aa11.86□□□□□ -0.51
HOXC6-201ENST00000243108 LINC00588Q9Y4M8 146 aa11.86□□□□□ -0.51
HOXC6-201ENST00000243108 TRAV8-3A0A0A6YYJ7 113 aa11.85□□□□□ -0.51
HOXC6-201ENST00000243108 H3BRM9 83 aa11.85□□□□□ -0.51
HOXC6-201ENST00000243108 K7EP13 123 aa11.85□□□□□ -0.51
HOXC6-201ENST00000243108 SPANXB1Q9NS25 103 aaPredicted RBP11.85□□□□□ -0.51
HOXC6-201ENST00000243108 SPINK8P0C7L1 97 aa11.84□□□□□ -0.51
HOXC6-201ENST00000243108 IGLV4-60A0A075B6I1 120 aa11.83□□□□□ -0.52
HOXC6-201ENST00000243108 TRAV13-1A0A0B4J241 112 aa11.83□□□□□ -0.52
HOXC6-201ENST00000243108 IGLV5-39A0A0G2JS06 123 aa11.82□□□□□ -0.52
HOXC6-201ENST00000243108 A0A1B0GUV1 79 aa11.82□□□□□ -0.52
HOXC6-201ENST00000243108 PTTG1IPP53801 180 aa11.82□□□□□ -0.52
HOXC6-201ENST00000243108 C10orf126Q8N4M7 172 aa11.81□□□□□ -0.52
HOXC6-201ENST00000243108 A0A096LPF7 62 aa11.8□□□□□ -0.52
HOXC6-201ENST00000243108 SMIM13P0DJ93 91 aa11.8□□□□□ -0.52
HOXC6-201ENST00000243108 CCL18P55774 89 aa11.8□□□□□ -0.52
HOXC6-201ENST00000243108 MRPL23Q16540 153 aaKnown RBP11.8□□□□□ -0.52
HOXC6-201ENST00000243108 NBDYA0A0U1RRE5 68 aa11.8□□□□□ -0.52
HOXC6-201ENST00000243108 SRSF9Q13242 221 aaKnown RBP eCLIP11.8□□□□□ -0.52
HOXC6-201ENST00000243108 ESRGQ1W209 222 aa11.8□□□□□ -0.52
HOXC6-201ENST00000243108 SH2D6Q7Z4S9 175 aa11.8□□□□□ -0.52
HOXC6-201ENST00000243108 A0A0J9YXY3 114 aa11.79□□□□□ -0.52
HOXC6-201ENST00000243108 A0A1B0GWB2 263 aa11.79□□□□□ -0.52
HOXC6-201ENST00000243108 C9orf118A6NHY6 69 aa11.79□□□□□ -0.52
HOXC6-201ENST00000243108 SMIM1B2RUZ4 78 aa11.79□□□□□ -0.52
HOXC6-201ENST00000243108 C1orf134Q5TEV5 83 aa11.79□□□□□ -0.52
HOXC6-201ENST00000243108 NHP2Q9NX24 153 aaKnown RBP11.79□□□□□ -0.52
HOXC6-201ENST00000243108 NDUFA12Q9UI09 145 aa11.79□□□□□ -0.52
HOXC6-201ENST00000243108 ICOSQ9Y6W8 199 aa11.79□□□□□ -0.52
HOXC6-201ENST00000243108 RBX1P62877 108 aa11.78□□□□□ -0.52
HOXC6-201ENST00000243108 H3BNG1 76 aa11.77□□□□□ -0.52
HOXC6-201ENST00000243108 IGHV3-30P01768 117 aa11.77□□□□□ -0.52
HOXC6-201ENST00000243108 IGHV3-30-5P0DP03 117 aa11.77□□□□□ -0.52
HOXC6-201ENST00000243108 KRTAP1-5Q9BYS1 174 aa11.77□□□□□ -0.52
HOXC6-201ENST00000243108 TMEM238LA0A1B0GVL6 79 aa11.76□□□□□ -0.53
HOXC6-201ENST00000243108 A6NJY4 79 aa11.76□□□□□ -0.53
HOXC6-201ENST00000243108 TMEM238C9JI98 176 aa11.76□□□□□ -0.53
HOXC6-201ENST00000243108 K7ERJ3 54 aa11.76□□□□□ -0.53
HOXC6-201ENST00000243108 NDUFA1O15239 70 aa11.76□□□□□ -0.53
HOXC6-201ENST00000243108 Q9H8V8 135 aa11.76□□□□□ -0.53
HOXC6-201ENST00000243108 TMEM262E9PQX1 116 aa11.75□□□□□ -0.53
HOXC6-201ENST00000243108 RAB37Q96AX2 223 aa11.75□□□□□ -0.53
HOXC6-201ENST00000243108 LITAFQ99732 161 aa11.75□□□□□ -0.53
HOXC6-201ENST00000243108 LINC00959A0A1B0GUT2 108 aa11.74□□□□□ -0.53
HOXC6-201ENST00000243108 TNP2Q05952 138 aa11.74□□□□□ -0.53
HOXC6-201ENST00000243108 IGHV3OR16-9A0A0B4J2B5 98 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms