RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 DNAH10Q8IVF4 4471 aa6.7□□□□□ -1.34
HMGCL-201ENST00000235958 COX7A2LO14548 114 aa6.7□□□□□ -1.34
HMGCL-201ENST00000235958 SNRPEP62304 92 aaKnown RBP6.7□□□□□ -1.34
HMGCL-201ENST00000235958 SEC11AP67812 179 aa6.7□□□□□ -1.34
HMGCL-201ENST00000235958 GEMIN7Q9H840 131 aaKnown RBP6.7□□□□□ -1.34
HMGCL-201ENST00000235958 TRAV12-1A0A0B4J245 112 aa6.69□□□□□ -1.34
HMGCL-201ENST00000235958 TINCRA0A1B0GVN0 87 aa6.69□□□□□ -1.34
HMGCL-201ENST00000235958 USP17L23D6RBM5 183 aa6.69□□□□□ -1.34
HMGCL-201ENST00000235958 CFAP161Q6P656 301 aa6.69□□□□□ -1.34
HMGCL-201ENST00000235958 HIST3H2BBQ8N257 126 aa6.69□□□□□ -1.34
HMGCL-201ENST00000235958 PACRGQ96M98 296 aaPredicted RBP6.69□□□□□ -1.34
HMGCL-201ENST00000235958 MAP1LC3CQ9BXW4 147 aa6.69□□□□□ -1.34
HMGCL-201ENST00000235958 A0A087WZ39 114 aa6.68□□□□□ -1.34
HMGCL-201ENST00000235958 C5orf52A6NGY3 159 aa6.68□□□□□ -1.34
HMGCL-201ENST00000235958 H0Y8G0 127 aa6.68□□□□□ -1.34
HMGCL-201ENST00000235958 EREGO14944 169 aa6.68□□□□□ -1.34
HMGCL-201ENST00000235958 MALP21145 153 aa6.68□□□□□ -1.34
HMGCL-201ENST00000235958 HERVK_113P63121 156 aa6.68□□□□□ -1.34
HMGCL-201ENST00000235958 CDKN2A-AS1Q9UH64 79 aa6.68□□□□□ -1.34
HMGCL-201ENST00000235958 CHTOPQ9Y3Y2 248 aaKnown RBP6.68□□□□□ -1.34
HMGCL-201ENST00000235958 FRAS1Q86XX4 4008 aa6.67□□□□□ -1.34
HMGCL-201ENST00000235958 IGLV4-69A0A075B6H9 119 aa6.67□□□□□ -1.34
HMGCL-201ENST00000235958 IGLC3P0DOY3 106 aa6.67□□□□□ -1.34
HMGCL-201ENST00000235958 S100A2P29034 98 aa6.67□□□□□ -1.34
HMGCL-201ENST00000235958 C15orf56Q8N910 161 aa6.67□□□□□ -1.34
HMGCL-201ENST00000235958 MRPL35Q9NZE8 188 aaKnown RBP6.67□□□□□ -1.34
HMGCL-201ENST00000235958 IGHV1-58A0A0C4DH39 117 aa6.66□□□□□ -1.34
HMGCL-201ENST00000235958 A0A1B0GVY2 172 aa6.66□□□□□ -1.34
HMGCL-201ENST00000235958 SYS1-DBNDD2H3BUS1 97 aa6.66□□□□□ -1.34
HMGCL-201ENST00000235958 C3orf79P0CE67 100 aa6.66□□□□□ -1.34
HMGCL-201ENST00000235958 ODF1Q14990 250 aa6.66□□□□□ -1.34
HMGCL-201ENST00000235958 C14orf177Q52M58 125 aa6.66□□□□□ -1.34
HMGCL-201ENST00000235958 SPATA12Q7Z6I5 190 aa6.66□□□□□ -1.34
HMGCL-201ENST00000235958 LINC00469Q8N7U9 141 aa6.66□□□□□ -1.34
HMGCL-201ENST00000235958 Q8N814 137 aa6.66□□□□□ -1.34
HMGCL-201ENST00000235958 HIST1H2BLQ99880 126 aa6.66□□□□□ -1.34
HMGCL-201ENST00000235958 FAT2Q9NYQ8 4349 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 IGHV3-64A0A075B6Q5 118 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 IGLV5-45A0A087WSX0 123 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 hDV102S1A0JD36 115 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 C11orf86A6NJI1 115 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 F8VRH5 84 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 APOMO95445 188 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 SLPIP03973 132 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 FUSP35637 526 aaKnown RBP eCLIP6.65□□□□□ -1.34
HMGCL-201ENST00000235958 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 KRTDAPP60985 99 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 HIGD2BQ4VC39 106 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 LINC01561Q8N1V8 128 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 LINC00526Q96FQ7 95 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 PMCHL2Q9BQD1 86 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 CHAC1Q9BUX1 264 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 PGPEP1Q9NXJ5 209 aa6.65□□□□□ -1.34
HMGCL-201ENST00000235958 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.34
HMGCL-201ENST00000235958 EPPK1P58107 5090 aaKnown RBP6.64□□□□□ -1.35
HMGCL-201ENST00000235958 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.64□□□□□ -1.35
HMGCL-201ENST00000235958 GVQW2A0A096LPI5 108 aaPredicted RBP6.64□□□□□ -1.35
HMGCL-201ENST00000235958 ZNF561-AS1K7EIQ3 104 aa6.64□□□□□ -1.35
HMGCL-201ENST00000235958 ZNF22P17026 224 aaPredicted RBP6.64□□□□□ -1.35
HMGCL-201ENST00000235958 TMEM170BQ5T4T1 132 aa6.64□□□□□ -1.35
HMGCL-201ENST00000235958 PET117Q6UWS5 81 aa6.64□□□□□ -1.35
HMGCL-201ENST00000235958 H3BRM9 83 aa6.63□□□□□ -1.35
HMGCL-201ENST00000235958 NTN5Q8WTR8 489 aaPredicted RBP6.63□□□□□ -1.35
HMGCL-201ENST00000235958 ORAOV1Q8WV07 137 aa6.63□□□□□ -1.35
HMGCL-201ENST00000235958 SMIM1B2RUZ4 78 aa6.62□□□□□ -1.35
HMGCL-201ENST00000235958 DPM2O94777 84 aa6.62□□□□□ -1.35
HMGCL-201ENST00000235958 SPINK8P0C7L1 97 aa6.62□□□□□ -1.35
HMGCL-201ENST00000235958 KIAA0087Q14695 138 aa6.62□□□□□ -1.35
HMGCL-201ENST00000235958 LINC01545Q5VT33 79 aa6.62□□□□□ -1.35
HMGCL-201ENST00000235958 OR10D4PQ8NGN7 298 aa6.62□□□□□ -1.35
HMGCL-201ENST00000235958 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
HMGCL-201ENST00000235958 PKD1P98161 4303 aa6.62□□□□□ -1.35
HMGCL-201ENST00000235958 IGKCP01834 107 aa6.61□□□□□ -1.35
HMGCL-201ENST00000235958 PLNP26678 52 aa6.61□□□□□ -1.35
HMGCL-201ENST00000235958 SPAG11BQ08648 103 aa6.61□□□□□ -1.35
HMGCL-201ENST00000235958 C6orf226Q5I0X4 101 aa6.61□□□□□ -1.35
HMGCL-201ENST00000235958 TOMM7Q9P0U1 55 aa6.61□□□□□ -1.35
HMGCL-201ENST00000235958 BIRC6Q9NR09 4857 aa6.61□□□□□ -1.35
HMGCL-201ENST00000235958 IGLV5-52A0A0A0MRZ9 124 aa6.6□□□□□ -1.35
HMGCL-201ENST00000235958 TMEM223A0PJW6 202 aa6.6□□□□□ -1.35
HMGCL-201ENST00000235958 CNBPP62633 177 aaKnown RBP6.6□□□□□ -1.35
HMGCL-201ENST00000235958 SYCNQ0VAF6 134 aa6.6□□□□□ -1.35
HMGCL-201ENST00000235958 C2orf48Q96LS8 159 aa6.6□□□□□ -1.35
HMGCL-201ENST00000235958 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.59□□□□□ -1.35
HMGCL-201ENST00000235958 IGLV5-39A0A0G2JS06 123 aa6.59□□□□□ -1.35
HMGCL-201ENST00000235958 F8WDY8 70 aa6.59□□□□□ -1.35
HMGCL-201ENST00000235958 PRSS2P07478 247 aa6.59□□□□□ -1.35
HMGCL-201ENST00000235958 LINC01620Q4KN68 170 aa6.59□□□□□ -1.35
HMGCL-201ENST00000235958 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
HMGCL-201ENST00000235958 UNQ6190/PRO20217Q6UXQ8 127 aa6.59□□□□□ -1.35
HMGCL-201ENST00000235958 Q8IZM0 81 aa6.59□□□□□ -1.35
HMGCL-201ENST00000235958 C9orf163Q8N9P6 203 aa6.59□□□□□ -1.35
HMGCL-201ENST00000235958 COX7B2Q8TF08 81 aa6.59□□□□□ -1.35
HMGCL-201ENST00000235958 CAMK2N2Q96S95 79 aa6.59□□□□□ -1.35
HMGCL-201ENST00000235958 DNAH11Q96DT5 4516 aa6.58□□□□□ -1.36
HMGCL-201ENST00000235958 C20orf202A1L168 122 aa6.58□□□□□ -1.36
HMGCL-201ENST00000235958 GCSHP23434 173 aa6.58□□□□□ -1.36
HMGCL-201ENST00000235958 CKS1BP61024 79 aa6.58□□□□□ -1.36
HMGCL-201ENST00000235958 C10orf25Q5T742 122 aa6.58□□□□□ -1.36
HMGCL-201ENST00000235958 C2orf82Q6UX34 121 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms