RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 TMEM101Q96IK0 257 aa17.79■□□□□ 0.44
RUNDC3A-201ENST00000225441 IGHV3OR16-12A0A075B7B8 117 aa17.78■□□□□ 0.44
RUNDC3A-201ENST00000225441 ICOSQ9Y6W8 199 aa17.78■□□□□ 0.44
RUNDC3A-201ENST00000225441 TRBV10-2A0A0K0K1G8 114 aa17.77■□□□□ 0.44
RUNDC3A-201ENST00000225441 H7C2G1 150 aa17.77■□□□□ 0.44
RUNDC3A-201ENST00000225441 SHISA2Q6UWI4 295 aa17.77■□□□□ 0.44
RUNDC3A-201ENST00000225441 SPATA3Q8NHX4 192 aa17.77■□□□□ 0.44
RUNDC3A-201ENST00000225441 TRIAP1O43715 76 aa17.77■□□□□ 0.43
RUNDC3A-201ENST00000225441 H7C423 109 aa17.75■□□□□ 0.43
RUNDC3A-201ENST00000225441 RPL13AP40429 203 aaKnown RBP17.75■□□□□ 0.43
RUNDC3A-201ENST00000225441 LINC00242Q5T6M2 205 aa17.75■□□□□ 0.43
RUNDC3A-201ENST00000225441 A0A1B0GV72 72 aa17.74■□□□□ 0.43
RUNDC3A-201ENST00000225441 C9orf66Q5T8R8 295 aa17.73■□□□□ 0.43
RUNDC3A-201ENST00000225441 C16orf74Q96GX8 76 aa17.73■□□□□ 0.43
RUNDC3A-201ENST00000225441 H3BT86 120 aa17.72■□□□□ 0.43
RUNDC3A-201ENST00000225441 WFDC9Q8NEX5 89 aa17.72■□□□□ 0.43
RUNDC3A-201ENST00000225441 HERV-K104P63124 156 aa17.71■□□□□ 0.43
RUNDC3A-201ENST00000225441 Q6ZTI0 123 aa17.7■□□□□ 0.42
RUNDC3A-201ENST00000225441 CDC42SE2Q9NRR3 84 aa17.7■□□□□ 0.42
RUNDC3A-201ENST00000225441 A8MZ25 164 aa17.7■□□□□ 0.42
RUNDC3A-201ENST00000225441 COX6A2Q02221 97 aa17.7■□□□□ 0.42
RUNDC3A-201ENST00000225441 NTM-AS1Q6ZSK4 140 aa17.69■□□□□ 0.42
RUNDC3A-201ENST00000225441 OVOL2Q9BRP0 275 aa17.69■□□□□ 0.42
RUNDC3A-201ENST00000225441 VWFP04275 2813 aa17.69■□□□□ 0.42
RUNDC3A-201ENST00000225441 TRBV6-4A0A1B0GX49 114 aa17.68■□□□□ 0.42
RUNDC3A-201ENST00000225441 SMIM1B2RUZ4 78 aa17.68■□□□□ 0.42
RUNDC3A-201ENST00000225441 TMEM243Q9BU79 118 aa17.68■□□□□ 0.42
RUNDC3A-201ENST00000225441 Q9H8V8 135 aa17.68■□□□□ 0.42
RUNDC3A-201ENST00000225441 LINC00694P0DN24 101 aa17.67■□□□□ 0.42
RUNDC3A-201ENST00000225441 LINC00308Q8TCZ7 52 aa17.67■□□□□ 0.42
RUNDC3A-201ENST00000225441 LST1O00453 97 aa17.66■□□□□ 0.42
RUNDC3A-201ENST00000225441 XGP55808 180 aa17.65■□□□□ 0.42
RUNDC3A-201ENST00000225441 GIG44P09565 113 aaPredicted RBP17.65■□□□□ 0.42
RUNDC3A-201ENST00000225441 NTN5Q8WTR8 489 aaPredicted RBP17.65■□□□□ 0.42
RUNDC3A-201ENST00000225441 UBE2L6O14933 153 aa17.64■□□□□ 0.41
RUNDC3A-201ENST00000225441 ZNF625Q96I27 306 aaPredicted RBP17.64■□□□□ 0.41
RUNDC3A-201ENST00000225441 NOP10Q9NPE3 64 aaKnown RBP17.64■□□□□ 0.41
RUNDC3A-201ENST00000225441 GAGE12JA6NER3 117 aa17.63■□□□□ 0.41
RUNDC3A-201ENST00000225441 F5H768 121 aa17.63■□□□□ 0.41
RUNDC3A-201ENST00000225441 GAGE4Q13068 117 aa17.63■□□□□ 0.41
RUNDC3A-201ENST00000225441 GAGE5Q13069 117 aa17.63■□□□□ 0.41
RUNDC3A-201ENST00000225441 MT-ATP8P03928 68 aa17.63■□□□□ 0.41
RUNDC3A-201ENST00000225441 C2orf82Q6UX34 121 aa17.63■□□□□ 0.41
RUNDC3A-201ENST00000225441 PLAC8L1A1L4L8 177 aa17.62■□□□□ 0.41
RUNDC3A-201ENST00000225441 UBE2WQ96B02 151 aa17.62■□□□□ 0.41
RUNDC3A-201ENST00000225441 C19orf73Q9NVV2 129 aa17.62■□□□□ 0.41
RUNDC3A-201ENST00000225441 STAB1Q9NY15 2570 aa17.62■□□□□ 0.41
RUNDC3A-201ENST00000225441 TRAV13-1A0A0B4J241 112 aa17.6■□□□□ 0.41
RUNDC3A-201ENST00000225441 WIPF1O43516 503 aa17.6■□□□□ 0.41
RUNDC3A-201ENST00000225441 CKS1BP61024 79 aa17.6■□□□□ 0.41
RUNDC3A-201ENST00000225441 DEFB121Q5J5C9 76 aa17.59■□□□□ 0.41
RUNDC3A-201ENST00000225441 COL6A5A8TX70 2615 aa17.59■□□□□ 0.41
RUNDC3A-201ENST00000225441 TRGV2A0A075B6R0 118 aa17.58■□□□□ 0.41
RUNDC3A-201ENST00000225441 NPC2P61916 151 aa17.58■□□□□ 0.41
RUNDC3A-201ENST00000225441 CSNK1G2-AS1Q8NCQ2 148 aa17.58■□□□□ 0.41
RUNDC3A-201ENST00000225441 WFDC10AQ9H1F0 79 aa17.58■□□□□ 0.4
RUNDC3A-201ENST00000225441 TRAV8-4A0A0B4J246 113 aa17.56■□□□□ 0.4
RUNDC3A-201ENST00000225441 MRPL23Q16540 153 aaKnown RBP17.56■□□□□ 0.4
RUNDC3A-201ENST00000225441 MEIG1Q5JSS6 88 aa17.56■□□□□ 0.4
RUNDC3A-201ENST00000225441 COX7A2LO14548 114 aa17.55■□□□□ 0.4
RUNDC3A-201ENST00000225441 DAND5Q8N907 189 aa17.55■□□□□ 0.4
RUNDC3A-201ENST00000225441 FAM240AA0A1B0GVK7 77 aa17.54■□□□□ 0.4
RUNDC3A-201ENST00000225441 GAGE7O76087 117 aa17.54■□□□□ 0.4
RUNDC3A-201ENST00000225441 GAGE12FP0CL80 117 aa17.54■□□□□ 0.4
RUNDC3A-201ENST00000225441 GAGE12GP0CL81 117 aa17.54■□□□□ 0.4
RUNDC3A-201ENST00000225441 GAGE12IP0CL82 117 aa17.54■□□□□ 0.4
RUNDC3A-201ENST00000225441 TRGV4A0A0C4DH28 118 aa17.54■□□□□ 0.4
RUNDC3A-201ENST00000225441 MDFIQ99750 246 aa17.54■□□□□ 0.4
RUNDC3A-201ENST00000225441 CLEC2BQ92478 149 aa17.53■□□□□ 0.4
RUNDC3A-201ENST00000225441 TEX49A0A1B0GTD5 131 aa17.52■□□□□ 0.4
RUNDC3A-201ENST00000225441 FAM222AQ5U5X8 452 aa17.51■□□□□ 0.39
RUNDC3A-201ENST00000225441 TRRAPQ9Y4A5 3859 aa17.51■□□□□ 0.39
RUNDC3A-201ENST00000225441 Q6Q795 121 aa17.51■□□□□ 0.39
RUNDC3A-201ENST00000225441 NOTCH3Q9UM47 2321 aa17.5■□□□□ 0.39
RUNDC3A-201ENST00000225441 RPL35AP18077 110 aaKnown RBP17.5■□□□□ 0.39
RUNDC3A-201ENST00000225441 SOSTDC1Q6X4U4 206 aa17.5■□□□□ 0.39
RUNDC3A-201ENST00000225441 TRBV6-8A0A0A6YYG3 113 aa17.49■□□□□ 0.39
RUNDC3A-201ENST00000225441 FHL2Q14192 279 aa17.49■□□□□ 0.39
RUNDC3A-201ENST00000225441 OXLD1Q5BKU9 147 aa17.49■□□□□ 0.39
RUNDC3A-201ENST00000225441 COX7B2Q8TF08 81 aa17.49■□□□□ 0.39
RUNDC3A-201ENST00000225441 SNCGO76070 127 aa17.49■□□□□ 0.39
RUNDC3A-201ENST00000225441 TRACP01848 142 aa17.49■□□□□ 0.39
RUNDC3A-201ENST00000225441 KIR2DL5BQ8NHK3 375 aa17.49■□□□□ 0.39
RUNDC3A-201ENST00000225441 TRAV13-2A0A0B4J235 113 aa17.48■□□□□ 0.39
RUNDC3A-201ENST00000225441 LINC00612Q8N6U2 182 aa17.46■□□□□ 0.39
RUNDC3A-201ENST00000225441 ACYP1P07311 99 aa17.44■□□□□ 0.38
RUNDC3A-201ENST00000225441 LOC100131303A0A0U1RQF7 123 aa17.43■□□□□ 0.38
RUNDC3A-201ENST00000225441 GAGE2BQ13066 116 aa17.43■□□□□ 0.38
RUNDC3A-201ENST00000225441 GAGE2EQ4V326 116 aa17.43■□□□□ 0.38
RUNDC3A-201ENST00000225441 GAGE2DQ9UEU5 116 aa17.43■□□□□ 0.38
RUNDC3A-201ENST00000225441 GAGE6Q13070 117 aa17.42■□□□□ 0.38
RUNDC3A-201ENST00000225441 A0A087WZ39 114 aa17.42■□□□□ 0.38
RUNDC3A-201ENST00000225441 IGHV3OR16-9A0A0B4J2B5 98 aa17.42■□□□□ 0.38
RUNDC3A-201ENST00000225441 EGFEM1PQ0D2K5 195 aa17.42■□□□□ 0.38
RUNDC3A-201ENST00000225441 RPL28P46779 137 aaKnown RBP17.41■□□□□ 0.38
RUNDC3A-201ENST00000225441 A0A0U1RRA0 63 aa17.4■□□□□ 0.38
RUNDC3A-201ENST00000225441 SMIM9A6NGZ8 99 aa17.4■□□□□ 0.38
RUNDC3A-201ENST00000225441 IBA57-AS1B1ANH7 110 aa17.4■□□□□ 0.38
RUNDC3A-201ENST00000225441 KRTAP10-11P60412 298 aa17.4■□□□□ 0.38
RUNDC3A-201ENST00000225441 CHCHD5Q9BSY4 110 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms