RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 A0A1B0GXF2 115 aa9.75□□□□□ -0.85
ERCC1-201ENST00000013807 PPBPP02775 128 aa9.75□□□□□ -0.85
ERCC1-201ENST00000013807 S100A8P05109 93 aa9.75□□□□□ -0.85
ERCC1-201ENST00000013807 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
ERCC1-201ENST00000013807 SPAG11BQ08648 103 aa9.75□□□□□ -0.85
ERCC1-201ENST00000013807 PSORS1C2Q9UIG4 136 aa9.75□□□□□ -0.85
ERCC1-201ENST00000013807 F8W036 122 aa9.74□□□□□ -0.85
ERCC1-201ENST00000013807 TLX1NBP0CAT3 122 aa9.74□□□□□ -0.85
ERCC1-201ENST00000013807 PEA15Q15121 130 aa9.74□□□□□ -0.85
ERCC1-201ENST00000013807 HBBP68871 147 aa9.73□□□□□ -0.85
ERCC1-201ENST00000013807 SRSF3P84103 164 aaKnown RBP9.73□□□□□ -0.85
ERCC1-201ENST00000013807 IMMP2LQ96T52 175 aa9.73□□□□□ -0.85
ERCC1-201ENST00000013807 D6R8Y8 96 aa9.72□□□□□ -0.85
ERCC1-201ENST00000013807 ODF1Q14990 250 aa9.72□□□□□ -0.85
ERCC1-201ENST00000013807 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
ERCC1-201ENST00000013807 PYGO1Q9Y3Y4 419 aa9.72□□□□□ -0.85
ERCC1-201ENST00000013807 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
ERCC1-201ENST00000013807 PRSS47A8MTI9 375 aa9.71□□□□□ -0.86
ERCC1-201ENST00000013807 NPYP01303 97 aa9.71□□□□□ -0.86
ERCC1-201ENST00000013807 RPL18AQ02543 176 aaKnown RBP9.71□□□□□ -0.86
ERCC1-201ENST00000013807 NDUFA1O15239 70 aa9.7□□□□□ -0.86
ERCC1-201ENST00000013807 ATP5L2Q7Z4Y8 100 aa9.7□□□□□ -0.86
ERCC1-201ENST00000013807 ORAOV1Q8WV07 137 aa9.7□□□□□ -0.86
ERCC1-201ENST00000013807 A0A087WZ39 114 aa9.69□□□□□ -0.86
ERCC1-201ENST00000013807 MT-ND6P03923 174 aa9.69□□□□□ -0.86
ERCC1-201ENST00000013807 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
ERCC1-201ENST00000013807 MRPL54Q6P161 138 aaKnown RBP9.69□□□□□ -0.86
ERCC1-201ENST00000013807 PHF5AQ7RTV0 110 aaKnown RBP9.69□□□□□ -0.86
ERCC1-201ENST00000013807 ORMDL3Q8N138 153 aa9.69□□□□□ -0.86
ERCC1-201ENST00000013807 IFITM10A6NMD0 228 aa9.68□□□□□ -0.86
ERCC1-201ENST00000013807 C10orf25Q5T742 122 aa9.68□□□□□ -0.86
ERCC1-201ENST00000013807 C1orf137Q5JT78 98 aa9.67□□□□□ -0.86
ERCC1-201ENST00000013807 LINC00242Q5T6M2 205 aa9.67□□□□□ -0.86
ERCC1-201ENST00000013807 UNQ6190/PRO20217Q6UXQ8 127 aa9.67□□□□□ -0.86
ERCC1-201ENST00000013807 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
ERCC1-201ENST00000013807 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
ERCC1-201ENST00000013807 C6orf48Q9UBA6 75 aa9.67□□□□□ -0.86
ERCC1-201ENST00000013807 IGLV4-3A0A075B6K6 122 aa9.66□□□□□ -0.86
ERCC1-201ENST00000013807 A0A1B0GVG6 124 aa9.66□□□□□ -0.86
ERCC1-201ENST00000013807 IGLV7-43P04211 117 aa9.66□□□□□ -0.86
ERCC1-201ENST00000013807 RAB5AP20339 215 aa9.66□□□□□ -0.86
ERCC1-201ENST00000013807 IFI27P40305 119 aaPredicted RBP9.66□□□□□ -0.86
ERCC1-201ENST00000013807 LAMTOR2Q9Y2Q5 125 aa9.66□□□□□ -0.86
ERCC1-201ENST00000013807 TGIF2-C20orf24A0A0A6YYL0 155 aa9.65□□□□□ -0.86
ERCC1-201ENST00000013807 KRTAP7-1Q8IUC3 87 aa9.65□□□□□ -0.86
ERCC1-201ENST00000013807 PRELID3AQ96N28 172 aa9.65□□□□□ -0.86
ERCC1-201ENST00000013807 TRBV30A0A0K0K1B3 111 aa9.64□□□□□ -0.87
ERCC1-201ENST00000013807 KRTAP11-1Q8IUC1 163 aa9.64□□□□□ -0.87
ERCC1-201ENST00000013807 DIRC1Q969H9 104 aa9.64□□□□□ -0.87
ERCC1-201ENST00000013807 TMEM141Q96I45 108 aa9.64□□□□□ -0.87
ERCC1-201ENST00000013807 FAM168BA1KXE4 195 aa9.63□□□□□ -0.87
ERCC1-201ENST00000013807 NPSP0C0P6 89 aa9.63□□□□□ -0.87
ERCC1-201ENST00000013807 UBE2D1P51668 147 aa9.62□□□□□ -0.87
ERCC1-201ENST00000013807 AMELXQ99217 191 aa9.62□□□□□ -0.87
ERCC1-201ENST00000013807 NDUFC2-KCTD14E9PQ53 114 aa9.61□□□□□ -0.87
ERCC1-201ENST00000013807 H0Y9J4 135 aa9.61□□□□□ -0.87
ERCC1-201ENST00000013807 K7EMI3 77 aa9.61□□□□□ -0.87
ERCC1-201ENST00000013807 FAM19A3Q7Z5A8 133 aa9.61□□□□□ -0.87
ERCC1-201ENST00000013807 PNRC1Q12796 327 aaPredicted RBP9.6□□□□□ -0.87
ERCC1-201ENST00000013807 TEX43Q6ZNM6 134 aa9.6□□□□□ -0.87
ERCC1-201ENST00000013807 LINC00173Q6ZV60 143 aa9.6□□□□□ -0.87
ERCC1-201ENST00000013807 Q8N8P6 123 aa9.6□□□□□ -0.87
ERCC1-201ENST00000013807 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
ERCC1-201ENST00000013807 GAGE2EQ4V326 116 aa9.59□□□□□ -0.87
ERCC1-201ENST00000013807 ANAPC16Q96DE5 110 aa9.59□□□□□ -0.87
ERCC1-201ENST00000013807 GAGE2DQ9UEU5 116 aa9.59□□□□□ -0.87
ERCC1-201ENST00000013807 CYSLTR1Q9Y271 337 aa9.59□□□□□ -0.87
ERCC1-201ENST00000013807 IGLV1-50A0A075B6I6 118 aa9.58□□□□□ -0.88
ERCC1-201ENST00000013807 IGIPA6NJ69 53 aa9.58□□□□□ -0.88
ERCC1-201ENST00000013807 KRTAP1-4P0C5Y4 121 aa9.58□□□□□ -0.88
ERCC1-201ENST00000013807 C9orf129Q5T035 196 aaKnown RBP9.58□□□□□ -0.88
ERCC1-201ENST00000013807 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
ERCC1-201ENST00000013807 C2orf66Q6UXQ4 117 aa9.58□□□□□ -0.88
ERCC1-201ENST00000013807 FAM19A5Q7Z5A7 132 aaPredicted RBP9.58□□□□□ -0.88
ERCC1-201ENST00000013807 PRR26Q8N8Z3 221 aa9.58□□□□□ -0.88
ERCC1-201ENST00000013807 C2orf88Q9BSF0 95 aa9.58□□□□□ -0.88
ERCC1-201ENST00000013807 ORMDL2Q53FV1 153 aa9.57□□□□□ -0.88
ERCC1-201ENST00000013807 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
ERCC1-201ENST00000013807 LOC389332A0A1B0GUA5 103 aa9.56□□□□□ -0.88
ERCC1-201ENST00000013807 M0QXV9 152 aa9.56□□□□□ -0.88
ERCC1-201ENST00000013807 MT-ND4LP03901 98 aa9.56□□□□□ -0.88
ERCC1-201ENST00000013807 Q6ZN92 141 aa9.56□□□□□ -0.88
ERCC1-201ENST00000013807 VCX2Q9H322 139 aa9.56□□□□□ -0.88
ERCC1-201ENST00000013807 Q8IZM0 81 aa9.55□□□□□ -0.88
ERCC1-201ENST00000013807 NXT2Q9NPJ8 142 aaKnown RBP9.54□□□□□ -0.88
ERCC1-201ENST00000013807 LPAP08519 4548 aa9.54□□□□□ -0.88
ERCC1-201ENST00000013807 G0S2P27469 103 aa9.53□□□□□ -0.88
ERCC1-201ENST00000013807 SEC11AP67812 179 aa9.53□□□□□ -0.88
ERCC1-201ENST00000013807 PAPPA-AS1Q5QFB9 102 aa9.53□□□□□ -0.88
ERCC1-201ENST00000013807 ZC2HC1BQ5TFG8 222 aa9.53□□□□□ -0.88
ERCC1-201ENST00000013807 HERVK_113P63121 156 aa9.52□□□□□ -0.89
ERCC1-201ENST00000013807 UBE2BP63146 152 aa9.52□□□□□ -0.89
ERCC1-201ENST00000013807 C6orf226Q5I0X4 101 aa9.52□□□□□ -0.89
ERCC1-201ENST00000013807 TIMM17AQ99595 171 aa9.52□□□□□ -0.89
ERCC1-201ENST00000013807 CARHSP1Q9Y2V2 147 aaKnown RBP9.52□□□□□ -0.89
ERCC1-201ENST00000013807 PRSS2P07478 247 aa9.51□□□□□ -0.89
ERCC1-201ENST00000013807 RPL13AP40429 203 aaKnown RBP9.51□□□□□ -0.89
ERCC1-201ENST00000013807 CKS1BP61024 79 aa9.51□□□□□ -0.89
ERCC1-201ENST00000013807 ZNF861PO60384 105 aa9.5□□□□□ -0.89
ERCC1-201ENST00000013807 TOMM6Q96B49 74 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms