RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Olfr779E9PUS9 130 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Sfrp2P97299 295 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Defb30Q30KN4 75 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Olfr1178Q7TR20 323 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Megf9Q8BH27 600 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Gm9949Q8C9F4 104 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Gm4894Q8CA09 118 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 4933414I15RikQ9D4D5 133 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Pxmp4Q9JJW0 212 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Trav6n-5A0A075B621 112 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Trav6-5A0A075B6B5 112 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 ApcsP12246 224 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Edn1P22387 202 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Fam173aQ501J2 229 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 5930422O12RikQ8C4Y4 123 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Olfr491Q8VG06 310 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Ythdf2Q91YT7 579 aaKnown RBP18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Eny2Q9JIX0 101 aaKnown RBP18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Col13a1Q9R1N9 751 aa18.16■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Zfp931A2AHM2 298 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Aqp7O54794 303 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Lynx1P0DP60 116 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Dynlt3P56387 116 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Ube2g2P60605 165 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Ypel3P61237 119 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Pygo2Q80V76 405 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 9230109A22RikQ8BHE6 111 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Rab4bQ91ZR1 213 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Rab31Q921E2 194 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Tnfrsf13bQ9ET35 249 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Ovol1Q9WTJ2 267 aa18.15■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Vmn1r232A2RTT5 351 aa18.14■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Olfr872E9PVW2 323 aa18.14■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Olfr917Q7TRC3 309 aa18.14■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Olfr1404Q8VGE1 313 aa18.14■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Mrps11Q9DCA2 191 aaKnown RBP18.14■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Kcnip2Q9JJ69 270 aa18.14■□□□□ 0.5
Upf3a-201ENSMUST00000043767 Abca1P41233 2261 aa18.14■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Trav23A0A0G2JG17 115 aa18.14■□□□□ 0.49
Upf3a-201ENSMUST00000043767 H2al1jA2BFR3 109 aa18.14■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Dnd1Q6VY05 352 aa18.14■□□□□ 0.49
Upf3a-201ENSMUST00000043767 VsirQ9D659 308 aa18.14■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Trbv3A0A0A6YYE2 117 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 1700067P10RikG3X8U2 183 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gm20767O70517 169 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Vamp3P63024 103 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Olfr1271Q8VG62 305 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Glrx2Q923X4 156 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Errfi1Q99JZ7 461 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Tbx19Q99ME7 446 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Bhlha15Q9QYC3 197 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gm28171A0A087WQ19 227 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Zfp980A2A9J5 645 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 9130204L05RikG3UWB8 92 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 A630076J17RikJ3QQ32 107 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Rnf5O35445 180 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Cox7a2P48771 83 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 2810408A11RikQ6NSU2 435 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gm4763Q8CFJ5 196 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Olfr124Q8VGW6 315 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Derl1Q99J56 251 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Mixl1Q9WUI0 231 aa18.13■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Ighv1-19A0A0A6YWX0 117 aa18.12■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Spam1P48794 512 aa18.12■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Atp5g2P56383 146 aa18.12■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Tnfsf15Q5UBV8 252 aa18.12■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Olfr211Q8VGH2 309 aa18.12■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gm27027S4R1M6 97 aa18.12■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Igkv4-57A0A0A6YYE7 117 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gm4791J3QQ14 102 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Fabp4P04117 132 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Hist2h2beQ64524 126 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Smim19Q80ZU4 107 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 IqcjQ8BPW0 110 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Cdpf1Q8R3A2 119 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Tmem52Q9D702 196 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Mlst8Q9DCJ1 326 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gcn1E9PVA8 2671 aaKnown RBP18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gm4133K9J7G6 307 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 SelenotP62342 195 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Olfr1472Q7TQQ9 314 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Zfp874aQ8BX23 447 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Olfr1339Q8VGB1 315 aa18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 FlnaQ8BTM8 2647 aaKnown RBP18.11■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Tnfsf11O35235 316 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gm10334Q792Y8 246 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Olfr1371Q7TQT7 311 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Olfr411Q7TRW8 315 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Olfr1475Q8VEV6 314 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Lsm4Q9QXA5 137 aaKnown RBP18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gm37388A0A0A6YY46 143 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Olfr1248A0A1L1SSZ5 307 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Olfr1209Q3SXJ3 310 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Rhox10Q4TU83 196 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Sf3a2Q62203 475 aaKnown RBP18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Vmn1r50Q9EP51 310 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Mettl9Q9EPL4 318 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Gm12728V9GX31 77 aa18.1■□□□□ 0.49
Upf3a-201ENSMUST00000043767 Ighv1-26A0A075B5V0 117 aa18.09■□□□□ 0.49
Upf3a-201ENSMUST00000043767 P06323 132 aa18.09■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 76.6 ms