RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 IGHV1-58A0A0C4DH39 117 aa10.44□□□□□ -0.74
PHGDH-213ENST00000641272 SMKR1H3BMG3 65 aa10.44□□□□□ -0.74
PHGDH-213ENST00000641272 ESDP10768 282 aa10.44□□□□□ -0.74
PHGDH-213ENST00000641272 AMN1Q8IY45 258 aa10.43□□□□□ -0.74
PHGDH-213ENST00000641272 C7orf77A4D0Y5 90 aa10.42□□□□□ -0.74
PHGDH-213ENST00000641272 HIGD1CA8MV81 97 aa10.42□□□□□ -0.74
PHGDH-213ENST00000641272 SS18Q15532 418 aa10.42□□□□□ -0.74
PHGDH-213ENST00000641272 RNASE13Q5GAN3 156 aaKnown RBP10.42□□□□□ -0.74
PHGDH-213ENST00000641272 CT83Q5H943 113 aa10.42□□□□□ -0.74
PHGDH-213ENST00000641272 SMIM7Q9BQ49 75 aa10.42□□□□□ -0.74
PHGDH-213ENST00000641272 hCG_2014768A0A024R1R8 64 aa10.41□□□□□ -0.74
PHGDH-213ENST00000641272 A0A1B0GUT8 65 aa10.41□□□□□ -0.74
PHGDH-213ENST00000641272 BLOC1S1P78537 153 aa10.41□□□□□ -0.74
PHGDH-213ENST00000641272 SYCNQ0VAF6 134 aa10.41□□□□□ -0.74
PHGDH-213ENST00000641272 CDC42SE2Q9NRR3 84 aa10.41□□□□□ -0.74
PHGDH-213ENST00000641272 LRP2P98164 4655 aa10.4□□□□□ -0.74
PHGDH-213ENST00000641272 ZNF561-AS1K7EIQ3 104 aa10.4□□□□□ -0.74
PHGDH-213ENST00000641272 CAMPP49913 170 aa10.4□□□□□ -0.74
PHGDH-213ENST00000641272 LINC01551Q86U37 167 aa10.4□□□□□ -0.74
PHGDH-213ENST00000641272 TSKUQ8WUA8 353 aa10.4□□□□□ -0.74
PHGDH-213ENST00000641272 LINC01600Q96MT4 127 aa10.4□□□□□ -0.74
PHGDH-213ENST00000641272 TMEM191AQ9H0A3 160 aa10.4□□□□□ -0.74
PHGDH-213ENST00000641272 RAB4AP20338 218 aa10.39□□□□□ -0.75
PHGDH-213ENST00000641272 POLR2KP53803 58 aaKnown RBP10.39□□□□□ -0.75
PHGDH-213ENST00000641272 GAGE2BQ13066 116 aa10.39□□□□□ -0.75
PHGDH-213ENST00000641272 CD164L2Q6UWJ8 174 aa10.39□□□□□ -0.75
PHGDH-213ENST00000641272 MRPL52Q86TS9 123 aaKnown RBP10.39□□□□□ -0.75
PHGDH-213ENST00000641272 AKAP14Q86UN6 197 aa10.39□□□□□ -0.75
PHGDH-213ENST00000641272 ZNF664Q8N3J9 261 aa10.39□□□□□ -0.75
PHGDH-213ENST00000641272 EIF5A2Q9GZV4 153 aaKnown RBP10.39□□□□□ -0.75
PHGDH-213ENST00000641272 IGLV4-69A0A075B6H9 119 aa10.38□□□□□ -0.75
PHGDH-213ENST00000641272 FCER1GP30273 86 aa10.38□□□□□ -0.75
PHGDH-213ENST00000641272 LINC00474Q9P2X8 69 aa10.38□□□□□ -0.75
PHGDH-213ENST00000641272 PKIGQ9Y2B9 76 aa10.38□□□□□ -0.75
PHGDH-213ENST00000641272 TRBV27A0A0K0K1C4 114 aa10.37□□□□□ -0.75
PHGDH-213ENST00000641272 ZNF727A8MUV8 499 aa10.37□□□□□ -0.75
PHGDH-213ENST00000641272 MALP21145 153 aa10.37□□□□□ -0.75
PHGDH-213ENST00000641272 Q6ZUT4 128 aa10.37□□□□□ -0.75
PHGDH-213ENST00000641272 TRAV13-1A0A0B4J241 112 aa10.36□□□□□ -0.75
PHGDH-213ENST00000641272 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
PHGDH-213ENST00000641272 PTTG1IPP53801 180 aa10.36□□□□□ -0.75
PHGDH-213ENST00000641272 COX7A2LO14548 114 aa10.35□□□□□ -0.75
PHGDH-213ENST00000641272 SPINK6Q6UWN8 80 aa10.35□□□□□ -0.75
PHGDH-213ENST00000641272 NRACQ8N912 160 aa10.35□□□□□ -0.75
PHGDH-213ENST00000641272 CAMK2N2Q96S95 79 aa10.35□□□□□ -0.75
PHGDH-213ENST00000641272 OSTCQ9NRP0 149 aa10.35□□□□□ -0.75
PHGDH-213ENST00000641272 UBE2D4Q9Y2X8 147 aa10.35□□□□□ -0.75
PHGDH-213ENST00000641272 V9GYV3 84 aa10.35□□□□□ -0.75
PHGDH-213ENST00000641272 LOC107984640A0A0U1RRK4 108 aa10.34□□□□□ -0.75
PHGDH-213ENST00000641272 SRP19P09132 144 aaKnown RBP10.34□□□□□ -0.75
PHGDH-213ENST00000641272 SUMO2P61956 95 aaKnown RBP10.34□□□□□ -0.75
PHGDH-213ENST00000641272 RPL18AQ02543 176 aaKnown RBP10.34□□□□□ -0.75
PHGDH-213ENST00000641272 REG3GQ6UW15 175 aa10.34□□□□□ -0.75
PHGDH-213ENST00000641272 Q6ZRP5 223 aa10.34□□□□□ -0.75
PHGDH-213ENST00000641272 C5orf38Q86SI9 138 aa10.34□□□□□ -0.75
PHGDH-213ENST00000641272 NUP35Q8NFH5 326 aa10.34□□□□□ -0.75
PHGDH-213ENST00000641272 ISOC2Q96AB3 205 aa10.34□□□□□ -0.75
PHGDH-213ENST00000641272 FAM210AQ96ND0 272 aa10.34□□□□□ -0.75
PHGDH-213ENST00000641272 VCYO14598 125 aa10.33□□□□□ -0.76
PHGDH-213ENST00000641272 RIGQ13278 110 aa10.33□□□□□ -0.76
PHGDH-213ENST00000641272 RNF213Q63HN8 5207 aa10.32□□□□□ -0.76
PHGDH-213ENST00000641272 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
PHGDH-213ENST00000641272 C1orf196B1AJZ1 125 aa10.32□□□□□ -0.76
PHGDH-213ENST00000641272 SPAG11BQ08648 103 aa10.32□□□□□ -0.76
PHGDH-213ENST00000641272 KIR2DL4Q99706 377 aa10.32□□□□□ -0.76
PHGDH-213ENST00000641272 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-213ENST00000641272 MRPL51Q4U2R6 128 aaKnown RBP10.31□□□□□ -0.76
PHGDH-213ENST00000641272 APOMO95445 188 aa10.3□□□□□ -0.76
PHGDH-213ENST00000641272 KRTAP10-8P60410 259 aa10.3□□□□□ -0.76
PHGDH-213ENST00000641272 ADIRFQ15847 76 aa10.3□□□□□ -0.76
PHGDH-213ENST00000641272 C9orf116Q5BN46 136 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-213ENST00000641272 OPRPNQ99935 248 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-213ENST00000641272 RPL23P62829 140 aaKnown RBP10.29□□□□□ -0.76
PHGDH-213ENST00000641272 RPL39P62891 51 aaKnown RBP10.29□□□□□ -0.76
PHGDH-213ENST00000641272 SRSF9Q13242 221 aaKnown RBP eCLIP10.29□□□□□ -0.76
PHGDH-213ENST00000641272 PHF5AQ7RTV0 110 aaKnown RBP10.29□□□□□ -0.76
PHGDH-213ENST00000641272 NAT8BQ9UHF3 227 aa10.28□□□□□ -0.76
PHGDH-213ENST00000641272 PSORS1C2Q9UIG4 136 aa10.28□□□□□ -0.76
PHGDH-213ENST00000641272 CSDC2Q9Y534 153 aaKnown RBP10.28□□□□□ -0.76
PHGDH-213ENST00000641272 PPP1R2P9O14990 202 aa10.27□□□□□ -0.77
PHGDH-213ENST00000641272 PPP1R17O96001 155 aa10.27□□□□□ -0.77
PHGDH-213ENST00000641272 MT-ND6P03923 174 aa10.27□□□□□ -0.77
PHGDH-213ENST00000641272 SMAGPQ0VAQ4 97 aa10.27□□□□□ -0.77
PHGDH-213ENST00000641272 FAM104BQ5XKR9 115 aa10.27□□□□□ -0.77
PHGDH-213ENST00000641272 TMEM241Q24JQ0 296 aa10.26□□□□□ -0.77
PHGDH-213ENST00000641272 ORAOV1Q8WV07 137 aa10.26□□□□□ -0.77
PHGDH-213ENST00000641272 TMEM18Q96B42 140 aa10.26□□□□□ -0.77
PHGDH-213ENST00000641272 C2orf48Q96LS8 159 aa10.26□□□□□ -0.77
PHGDH-213ENST00000641272 C9JQL5 133 aa10.25□□□□□ -0.77
PHGDH-213ENST00000641272 CKS2P33552 79 aa10.25□□□□□ -0.77
PHGDH-213ENST00000641272 FAM74A3Q4VXF1 159 aa10.25□□□□□ -0.77
PHGDH-213ENST00000641272 C1orf137Q5JT78 98 aa10.25□□□□□ -0.77
PHGDH-213ENST00000641272 MRPL54Q6P161 138 aaKnown RBP10.25□□□□□ -0.77
PHGDH-213ENST00000641272 TIMM21Q9BVV7 248 aa10.25□□□□□ -0.77
PHGDH-213ENST00000641272 SMIM2Q9BVW6 85 aa10.25□□□□□ -0.77
PHGDH-213ENST00000641272 FAM168BA1KXE4 195 aa10.23□□□□□ -0.77
PHGDH-213ENST00000641272 IFITM10A6NMD0 228 aa10.23□□□□□ -0.77
PHGDH-213ENST00000641272 D6R8Y8 96 aa10.23□□□□□ -0.77
PHGDH-213ENST00000641272 TCAPO15273 167 aa10.23□□□□□ -0.77
PHGDH-213ENST00000641272 TNFRSF6BO95407 300 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 1093.9 ms