RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 WFDC10BQ8IUB3 73 aa13.58□□□□□ -0.24
PHGDH-210ENST00000641115 VCX2Q9H322 139 aa13.58□□□□□ -0.24
PHGDH-210ENST00000641115 MRPS16Q9Y3D3 137 aaKnown RBP13.58□□□□□ -0.24
PHGDH-210ENST00000641115 LINC00588Q9Y4M8 146 aa13.58□□□□□ -0.24
PHGDH-210ENST00000641115 RBX1P62877 108 aa13.57□□□□□ -0.24
PHGDH-210ENST00000641115 PET117Q6UWS5 81 aa13.57□□□□□ -0.24
PHGDH-210ENST00000641115 TEX43Q6ZNM6 134 aa13.57□□□□□ -0.24
PHGDH-210ENST00000641115 Q8N976 141 aa13.57□□□□□ -0.24
PHGDH-210ENST00000641115 PMVKQ15126 192 aa13.57□□□□□ -0.24
PHGDH-210ENST00000641115 SPATA12Q7Z6I5 190 aa13.57□□□□□ -0.24
PHGDH-210ENST00000641115 ZNF664Q8N3J9 261 aa13.57□□□□□ -0.24
PHGDH-210ENST00000641115 CDC42SE2Q9NRR3 84 aa13.57□□□□□ -0.24
PHGDH-210ENST00000641115 TGP01266 2768 aa13.56□□□□□ -0.24
PHGDH-210ENST00000641115 IGLV4-60A0A075B6I1 120 aa13.56□□□□□ -0.24
PHGDH-210ENST00000641115 C20orf202A1L168 122 aa13.56□□□□□ -0.24
PHGDH-210ENST00000641115 RNASE13Q5GAN3 156 aaKnown RBP13.56□□□□□ -0.24
PHGDH-210ENST00000641115 FAM104AQ969W3 186 aa13.56□□□□□ -0.24
PHGDH-210ENST00000641115 TRAV12-1A0A0B4J245 112 aa13.55□□□□□ -0.24
PHGDH-210ENST00000641115 C2orf88Q9BSF0 95 aa13.55□□□□□ -0.24
PHGDH-210ENST00000641115 UBE2DNLQ8IWF7 75 aa13.54□□□□□ -0.24
PHGDH-210ENST00000641115 AMELXQ99217 191 aa13.54□□□□□ -0.24
PHGDH-210ENST00000641115 ZC2HC1BQ5TFG8 222 aa13.53□□□□□ -0.24
PHGDH-210ENST00000641115 UPK3BQ9BT76 320 aa13.53□□□□□ -0.24
PHGDH-210ENST00000641115 CST9LQ9H4G1 147 aa13.53□□□□□ -0.24
PHGDH-210ENST00000641115 PRSS29PA6NIE9 313 aa13.53□□□□□ -0.24
PHGDH-210ENST00000641115 SCGB1D1O95968 90 aa13.53□□□□□ -0.24
PHGDH-210ENST00000641115 ANGP03950 147 aaKnown RBP13.53□□□□□ -0.24
PHGDH-210ENST00000641115 LGALS9CQ6DKI2 356 aa13.53□□□□□ -0.24
PHGDH-210ENST00000641115 Q8N3U1 123 aa13.53□□□□□ -0.24
PHGDH-210ENST00000641115 IGHV3-30P01768 117 aa13.52□□□□□ -0.25
PHGDH-210ENST00000641115 IGHV3-33P01772 117 aa13.52□□□□□ -0.25
PHGDH-210ENST00000641115 IGHV3-30-3P0DP02 117 aa13.52□□□□□ -0.25
PHGDH-210ENST00000641115 IGHV3-30-5P0DP03 117 aa13.52□□□□□ -0.25
PHGDH-210ENST00000641115 ODF1Q14990 250 aa13.52□□□□□ -0.25
PHGDH-210ENST00000641115 LINC01545Q5VT33 79 aa13.52□□□□□ -0.25
PHGDH-210ENST00000641115 CHTOPQ9Y3Y2 248 aaKnown RBP13.52□□□□□ -0.25
PHGDH-210ENST00000641115 SIVA1O15304 175 aa13.51□□□□□ -0.25
PHGDH-210ENST00000641115 JOSD1Q15040 202 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-210ENST00000641115 LINC01556Q5JQF7 62 aa13.51□□□□□ -0.25
PHGDH-210ENST00000641115 F8VRH5 84 aa13.5□□□□□ -0.25
PHGDH-210ENST00000641115 DNAH10OSP0CZ25 163 aa13.5□□□□□ -0.25
PHGDH-210ENST00000641115 PMCHL2Q9BQD1 86 aa13.5□□□□□ -0.25
PHGDH-210ENST00000641115 C3orf84H3BNL1 204 aa13.49□□□□□ -0.25
PHGDH-210ENST00000641115 LINC00269Q8N2A0 174 aa13.49□□□□□ -0.25
PHGDH-210ENST00000641115 MRPL35Q9NZE8 188 aaKnown RBP13.49□□□□□ -0.25
PHGDH-210ENST00000641115 IGKV3OR2-268A0A0C4DH90 116 aa13.48□□□□□ -0.25
PHGDH-210ENST00000641115 PYY3Q5JQD4 70 aa13.48□□□□□ -0.25
PHGDH-210ENST00000641115 KLK12Q9UKR0 248 aa13.48□□□□□ -0.25
PHGDH-210ENST00000641115 DNAH7Q8WXX0 4024 aa13.48□□□□□ -0.25
PHGDH-210ENST00000641115 CSMD3Q7Z407 3707 aa13.47□□□□□ -0.25
PHGDH-210ENST00000641115 TRAV13-1A0A0B4J241 112 aa13.47□□□□□ -0.25
PHGDH-210ENST00000641115 PLNP26678 52 aa13.47□□□□□ -0.25
PHGDH-210ENST00000641115 CASC10Q5T4H9 136 aa13.47□□□□□ -0.25
PHGDH-210ENST00000641115 CLPSL2Q6UWE3 100 aa13.47□□□□□ -0.25
PHGDH-210ENST00000641115 Q9H8V8 135 aa13.47□□□□□ -0.25
PHGDH-210ENST00000641115 UBE2D1P51668 147 aa13.46□□□□□ -0.25
PHGDH-210ENST00000641115 REG3AQ06141 175 aa13.46□□□□□ -0.25
PHGDH-210ENST00000641115 DPM2O94777 84 aa13.46□□□□□ -0.26
PHGDH-210ENST00000641115 CRPP02741 224 aa13.46□□□□□ -0.26
PHGDH-210ENST00000641115 IGKCP01834 107 aa13.45□□□□□ -0.26
PHGDH-210ENST00000641115 IGLV4-69A0A075B6H9 119 aa13.44□□□□□ -0.26
PHGDH-210ENST00000641115 A0A0J9YXV3 536 aa13.44□□□□□ -0.26
PHGDH-210ENST00000641115 SMIM6P0DI80 62 aa13.44□□□□□ -0.26
PHGDH-210ENST00000641115 SEC11AP67812 179 aa13.44□□□□□ -0.26
PHGDH-210ENST00000641115 CHAC1Q9BUX1 264 aa13.44□□□□□ -0.26
PHGDH-210ENST00000641115 PRR34Q9NV39 138 aa13.44□□□□□ -0.26
PHGDH-210ENST00000641115 LINC00959A0A1B0GUT2 108 aa13.43□□□□□ -0.26
PHGDH-210ENST00000641115 IGLC3P0DOY3 106 aa13.43□□□□□ -0.26
PHGDH-210ENST00000641115 SS18Q15532 418 aa13.43□□□□□ -0.26
PHGDH-210ENST00000641115 ATOH7Q8N100 152 aa13.43□□□□□ -0.26
PHGDH-210ENST00000641115 NFE4Q86UQ8 179 aa13.42□□□□□ -0.26
PHGDH-210ENST00000641115 C10orf126Q8N4M7 172 aa13.42□□□□□ -0.26
PHGDH-210ENST00000641115 GEMIN7Q9H840 131 aaKnown RBP13.42□□□□□ -0.26
PHGDH-210ENST00000641115 TRAV9-2A0A087WT02 112 aa13.42□□□□□ -0.26
PHGDH-210ENST00000641115 TINCRA0A1B0GVN0 87 aa13.42□□□□□ -0.26
PHGDH-210ENST00000641115 C11orf86A6NJI1 115 aa13.42□□□□□ -0.26
PHGDH-210ENST00000641115 CCL25O15444 150 aa13.42□□□□□ -0.26
PHGDH-210ENST00000641115 LINC00242Q5T6M2 205 aa13.42□□□□□ -0.26
PHGDH-210ENST00000641115 UBE2WQ96B02 151 aa13.42□□□□□ -0.26
PHGDH-210ENST00000641115 STARD9Q9P2P6 4700 aa13.42□□□□□ -0.26
PHGDH-210ENST00000641115 DYNC2H1Q8NCM8 4307 aaKnown RBP13.42□□□□□ -0.26
PHGDH-210ENST00000641115 K7EP13 123 aa13.41□□□□□ -0.26
PHGDH-210ENST00000641115 FAM19A3Q7Z5A8 133 aa13.41□□□□□ -0.26
PHGDH-210ENST00000641115 HERVK_113P63121 156 aa13.4□□□□□ -0.26
PHGDH-210ENST00000641115 ENHOQ6UWT2 76 aa13.4□□□□□ -0.26
PHGDH-210ENST00000641115 MIAQ16674 131 aa13.39□□□□□ -0.27
PHGDH-210ENST00000641115 TMEM170BQ5T4T1 132 aa13.39□□□□□ -0.27
PHGDH-210ENST00000641115 TRAV8-4A0A0B4J246 113 aa13.38□□□□□ -0.27
PHGDH-210ENST00000641115 IGLV10-54A0A075B6I4 117 aa13.37□□□□□ -0.27
PHGDH-210ENST00000641115 IBA57-AS1B1ANH7 110 aa13.37□□□□□ -0.27
PHGDH-210ENST00000641115 HSBP1L1C9JCN9 74 aa13.37□□□□□ -0.27
PHGDH-210ENST00000641115 XCL1P47992 114 aa13.37□□□□□ -0.27
PHGDH-210ENST00000641115 LINC00469Q8N7U9 141 aa13.37□□□□□ -0.27
PHGDH-210ENST00000641115 ZNF22P17026 224 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-210ENST00000641115 CDPF1Q6NVV7 123 aa13.36□□□□□ -0.27
PHGDH-210ENST00000641115 CHCHD10Q8WYQ3 142 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-210ENST00000641115 COX6A2Q02221 97 aa13.35□□□□□ -0.27
PHGDH-210ENST00000641115 VAMP8Q9BV40 100 aa13.35□□□□□ -0.27
PHGDH-210ENST00000641115 IGLV5-45A0A087WSX0 123 aa13.35□□□□□ -0.27
PHGDH-210ENST00000641115 TRAV8-3A0A0A6YYJ7 113 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms