RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 A0A096LNJ9 63 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 CLPSL1A2RUU4 121 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 D6R8Y8 96 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 POLR1AO95602 1720 aaPredicted RBP1.87□□□□□ -2.11
VIM-210ENST00000637053 PPYP01298 95 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 ELOF1P60002 83 aaKnown RBP1.87□□□□□ -2.11
VIM-210ENST00000637053 KRTAP10-8P60410 259 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 TJP1Q07157 1748 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 DEFB116Q30KQ4 102 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 SDK2Q58EX2 2172 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 MALRD1Q5VYJ5 2156 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 MUSTN1Q8IVN3 82 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 CYYR1Q96J86 154 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 KLK12Q9UKR0 248 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 SNURFQ9Y675 71 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 LAMB2P55268 1798 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 ZNF236Q9UL36 1845 aa1.87□□□□□ -2.11
VIM-210ENST00000637053 BAZ2BQ9UIF8 2168 aaKnown RBP1.86□□□□□ -2.11
VIM-210ENST00000637053 MYO16Q9Y6X6 1858 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 TRBV7-4A0A0J9YYF1 115 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 HIGD1CA8MV81 97 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 H7C423 109 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 HMGA1P17096 107 aaKnown RBP1.86□□□□□ -2.11
VIM-210ENST00000637053 MRGPRG-AS1Q2M3A8 158 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 C1orf137Q5JT78 98 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 TYMSOSQ8TAI1 123 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 PRR15LQ9BU68 103 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 LENEPQ9Y5L5 61 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 LHFPL6Q9Y693 200 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 KIF25-AS1Q9Y6Z4 181 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 CLTCL1P53675 1640 aa1.86□□□□□ -2.11
VIM-210ENST00000637053 FREM3P0C091 2139 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 KIAA0100Q14667 2235 aaKnown RBP1.85□□□□□ -2.11
VIM-210ENST00000637053 A0A087WVE0 104 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 TRBV6-6A0A0A6YYG2 114 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 A0A0J9YX75 114 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 A0A0J9YY99 117 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 TRBV30A0A0K0K1B3 111 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 FAM168BA1KXE4 195 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 WISP3O95389 354 aaPredicted RBP1.85□□□□□ -2.11
VIM-210ENST00000637053 IGHV3-30P01768 117 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 IGHV3-30-5P0DP03 117 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 CAV3P56539 151 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 ERHP84090 104 aaKnown RBP1.85□□□□□ -2.11
VIM-210ENST00000637053 KRTAP25-1Q3LHN0 102 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 HIGD2BQ4VC39 106 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 KPRPQ5T749 579 aaPredicted RBP1.85□□□□□ -2.11
VIM-210ENST00000637053 C9orf163Q8N9P6 203 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 ST20-AS1Q8NBB2 130 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 DMAC1Q96GE9 116 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 PRR34Q9NV39 138 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 MRPL36Q9P0J6 103 aaKnown RBP1.85□□□□□ -2.11
VIM-210ENST00000637053 ORMDL1Q9P0S3 153 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 NHSQ6T4R5 1651 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 CPAMD8Q8IZJ3 1885 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 MYOFQ9NZM1 2061 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 HEATR5BQ9P2D3 2071 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 MROH2BQ7Z745 1585 aa1.85□□□□□ -2.11
VIM-210ENST00000637053 LAMA4Q16363 1823 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 MPDZO75970 2070 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 NINQ8N4C6 2090 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 IGKV3D-7A0A0C4DH55 119 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 TRBV6-5A0A0K0K1A5 114 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 NUPR2A6NF83 97 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 PPP1R17O96001 155 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 IFI6P09912 130 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 SPAG11BQ08648 103 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 SPAG11AQ6PDA7 123 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 Q86TA4 180 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 MYO7AQ13402 2215 aa1.84□□□□□ -2.11
VIM-210ENST00000637053 COL11A1P12107 1806 aaPredicted RBP1.84□□□□□ -2.12
VIM-210ENST00000637053 SIP14410 1827 aa1.84□□□□□ -2.12
VIM-210ENST00000637053 LRP6O75581 1613 aa1.84□□□□□ -2.12
VIM-210ENST00000637053 ABCA7Q8IZY2 2146 aa1.84□□□□□ -2.12
VIM-210ENST00000637053 HEATR1Q9H583 2144 aaKnown RBP1.84□□□□□ -2.12
VIM-210ENST00000637053 C5P01031 1676 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 ANKRD36CQ5JPF3 1778 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 ATP7AQ04656 1500 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 IGKV3-7A0A075B6H7 116 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 FCER1GP30273 86 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 CNBPP62633 177 aaKnown RBP1.83□□□□□ -2.12
VIM-210ENST00000637053 FAM74A4Q5TZK3 123 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 LYPD1Q8N2G4 141 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 FDCSPQ8NFU4 85 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 ZNF563Q8TA94 476 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 UBALD1Q8TB05 177 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 TXNDC17Q9BRA2 123 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 PKD1L3Q7Z443 1732 aa1.83□□□□□ -2.12
VIM-210ENST00000637053 COL14A1Q05707 1796 aaKnown RBP1.82□□□□□ -2.12
VIM-210ENST00000637053 TUBGCP6Q96RT7 1819 aa1.82□□□□□ -2.12
VIM-210ENST00000637053 GBF1Q92538 1859 aa1.82□□□□□ -2.12
VIM-210ENST00000637053 ADGRB2O60241 1585 aa1.82□□□□□ -2.12
VIM-210ENST00000637053 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
VIM-210ENST00000637053 SNRPGP62308 76 aaKnown RBP1.82□□□□□ -2.12
VIM-210ENST00000637053 PDE6HQ13956 83 aa1.82□□□□□ -2.12
VIM-210ENST00000637053 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
VIM-210ENST00000637053 AMELXQ99217 191 aa1.82□□□□□ -2.12
VIM-210ENST00000637053 C3P01024 1663 aa1.82□□□□□ -2.12
VIM-210ENST00000637053 FAM208AQ9UK61 1670 aaKnown RBP1.82□□□□□ -2.12
VIM-210ENST00000637053 FMN2Q9NZ56 1722 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms