RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CYSLTR1Q9Y271 337 aa10.72□□□□□ -0.69
CLN6-216ENST00000636876 G0S2P27469 103 aa10.71□□□□□ -0.69
CLN6-216ENST00000636876 RAB5BP61020 215 aa10.71□□□□□ -0.69
CLN6-216ENST00000636876 REG3AQ06141 175 aa10.71□□□□□ -0.69
CLN6-216ENST00000636876 C2orf66Q6UXQ4 117 aa10.71□□□□□ -0.69
CLN6-216ENST00000636876 CDC42SE2Q9NRR3 84 aa10.71□□□□□ -0.69
CLN6-216ENST00000636876 AP5S1Q9NUS5 200 aa10.71□□□□□ -0.69
CLN6-216ENST00000636876 LINC00614P0C842 121 aa10.7□□□□□ -0.7
CLN6-216ENST00000636876 MIAQ16674 131 aa10.7□□□□□ -0.7
CLN6-216ENST00000636876 ZNF664Q8N3J9 261 aa10.7□□□□□ -0.7
CLN6-216ENST00000636876 KRTAP17-1Q9BYP8 105 aa10.7□□□□□ -0.7
CLN6-216ENST00000636876 Q6ZUT4 128 aa10.69□□□□□ -0.7
CLN6-216ENST00000636876 RMI2Q96E14 147 aa10.69□□□□□ -0.7
CLN6-216ENST00000636876 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
CLN6-216ENST00000636876 FAT2Q9NYQ8 4349 aa10.68□□□□□ -0.7
CLN6-216ENST00000636876 IGKV2D-24A0A075B6R9 120 aa10.68□□□□□ -0.7
CLN6-216ENST00000636876 MRPS36P82909 103 aaKnown RBP10.68□□□□□ -0.7
CLN6-216ENST00000636876 FAM104AQ969W3 186 aa10.68□□□□□ -0.7
CLN6-216ENST00000636876 TOMM6Q96B49 74 aa10.68□□□□□ -0.7
CLN6-216ENST00000636876 TM2D2Q9BX73 214 aa10.68□□□□□ -0.7
CLN6-216ENST00000636876 HERC2O95714 4834 aa10.67□□□□□ -0.7
CLN6-216ENST00000636876 LINC00336Q6ZUF6 198 aa10.67□□□□□ -0.7
CLN6-216ENST00000636876 BAGE3Q86Y29 109 aa10.67□□□□□ -0.7
CLN6-216ENST00000636876 C1orf43Q9BWL3 253 aa10.67□□□□□ -0.7
CLN6-216ENST00000636876 COX11Q9Y6N1 276 aa10.67□□□□□ -0.7
CLN6-216ENST00000636876 IGLV4-3A0A075B6K6 122 aa10.66□□□□□ -0.7
CLN6-216ENST00000636876 TRAV8-4A0A0B4J246 113 aa10.66□□□□□ -0.7
CLN6-216ENST00000636876 IGKV3OR2-268A0A0C4DH90 116 aa10.66□□□□□ -0.7
CLN6-216ENST00000636876 LINC01549A6NIU2 74 aa10.66□□□□□ -0.7
CLN6-216ENST00000636876 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
CLN6-216ENST00000636876 RNASE13Q5GAN3 156 aaKnown RBP10.66□□□□□ -0.7
CLN6-216ENST00000636876 CHCHD1Q96BP2 118 aaKnown RBP10.66□□□□□ -0.7
CLN6-216ENST00000636876 OPRPNQ99935 248 aaPredicted RBP10.66□□□□□ -0.7
CLN6-216ENST00000636876 A0A096LNJ9 63 aa10.65□□□□□ -0.7
CLN6-216ENST00000636876 PSCAO43653 123 aa10.65□□□□□ -0.7
CLN6-216ENST00000636876 NPSP0C0P6 89 aa10.65□□□□□ -0.7
CLN6-216ENST00000636876 IGLV10-54A0A075B6I4 117 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 LINC00959A0A1B0GUT2 108 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST1H2BKO60814 126 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST1H2BJP06899 126 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST1H2BOP23527 126 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST1H2BBP33778 126 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST1H2BDP58876 126 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST1H2BCP62807 126 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 TNP2Q05952 138 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST2H2BEQ16778 126 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.64□□□□□ -0.71
CLN6-216ENST00000636876 KRTAP26-1Q6PEX3 210 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST1H2BHQ93079 126 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 TMEM141Q96I45 108 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 SCGB3A1Q96QR1 104 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 TIMM17AQ99595 171 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST1H2BNQ99877 126 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 HIST1H2BMQ99879 126 aa10.64□□□□□ -0.71
CLN6-216ENST00000636876 PRSS29PA6NIE9 313 aa10.63□□□□□ -0.71
CLN6-216ENST00000636876 SERF1AO75920 110 aa10.63□□□□□ -0.71
CLN6-216ENST00000636876 HBDP02042 147 aa10.63□□□□□ -0.71
CLN6-216ENST00000636876 LINC00310P59036 64 aa10.63□□□□□ -0.71
CLN6-216ENST00000636876 PMCHL1Q16048 86 aa10.63□□□□□ -0.71
CLN6-216ENST00000636876 ERASQ7Z444 233 aa10.63□□□□□ -0.71
CLN6-216ENST00000636876 DNAH11Q96DT5 4516 aa10.62□□□□□ -0.71
CLN6-216ENST00000636876 C1orf196B1AJZ1 125 aa10.62□□□□□ -0.71
CLN6-216ENST00000636876 Q6ZN92 141 aa10.62□□□□□ -0.71
CLN6-216ENST00000636876 MAPKAPK5-AS1Q8N8E1 139 aa10.62□□□□□ -0.71
CLN6-216ENST00000636876 HECTD4Q9Y4D8 3996 aa10.61□□□□□ -0.71
CLN6-216ENST00000636876 TRAV13-1A0A0B4J241 112 aa10.61□□□□□ -0.71
CLN6-216ENST00000636876 IFITM10A6NMD0 228 aa10.61□□□□□ -0.71
CLN6-216ENST00000636876 HSBP1O75506 76 aa10.61□□□□□ -0.71
CLN6-216ENST00000636876 SS18Q15532 418 aa10.61□□□□□ -0.71
CLN6-216ENST00000636876 PAPPA-AS1Q5QFB9 102 aa10.61□□□□□ -0.71
CLN6-216ENST00000636876 CHCHD10Q8WYQ3 142 aaPredicted RBP10.61□□□□□ -0.71
CLN6-216ENST00000636876 LRCOL1A6NCL2 159 aa10.6□□□□□ -0.71
CLN6-216ENST00000636876 GAGE12HA6NDE8 117 aa10.6□□□□□ -0.71
CLN6-216ENST00000636876 CCL25O15444 150 aa10.6□□□□□ -0.71
CLN6-216ENST00000636876 PDZD11Q5EBL8 140 aa10.6□□□□□ -0.71
CLN6-216ENST00000636876 TEX43Q6ZNM6 134 aa10.6□□□□□ -0.71
CLN6-216ENST00000636876 LINC00173Q6ZV60 143 aa10.6□□□□□ -0.71
CLN6-216ENST00000636876 AMELXQ99217 191 aa10.6□□□□□ -0.71
CLN6-216ENST00000636876 VCX2Q9H322 139 aa10.6□□□□□ -0.71
CLN6-216ENST00000636876 A0A087WTM6 91 aa10.59□□□□□ -0.71
CLN6-216ENST00000636876 ZC2HC1BQ5TFG8 222 aa10.59□□□□□ -0.71
CLN6-216ENST00000636876 PKD1P98161 4303 aa10.59□□□□□ -0.71
CLN6-216ENST00000636876 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.58□□□□□ -0.72
CLN6-216ENST00000636876 NUPR1O60356 82 aa10.58□□□□□ -0.72
CLN6-216ENST00000636876 XCL1P47992 114 aa10.58□□□□□ -0.72
CLN6-216ENST00000636876 FAM19A2Q8N3H0 131 aa10.58□□□□□ -0.72
CLN6-216ENST00000636876 BAALCQ8WXS3 180 aa10.58□□□□□ -0.72
CLN6-216ENST00000636876 C2orf88Q9BSF0 95 aa10.58□□□□□ -0.72
CLN6-216ENST00000636876 ATP5LO75964 103 aa10.57□□□□□ -0.72
CLN6-216ENST00000636876 FOXI1Q12951 378 aa10.57□□□□□ -0.72
CLN6-216ENST00000636876 WFDC2Q14508 124 aa10.57□□□□□ -0.72
CLN6-216ENST00000636876 CD164L2Q6UWJ8 174 aa10.57□□□□□ -0.72
CLN6-216ENST00000636876 EREGO14944 169 aa10.56□□□□□ -0.72
CLN6-216ENST00000636876 LECT2O14960 151 aa10.56□□□□□ -0.72
CLN6-216ENST00000636876 UBE2D1P51668 147 aa10.56□□□□□ -0.72
CLN6-216ENST00000636876 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
CLN6-216ENST00000636876 COA6Q5JTJ3 125 aaKnown RBP10.55□□□□□ -0.72
CLN6-216ENST00000636876 KIAA1109Q2LD37 5005 aa10.55□□□□□ -0.72
CLN6-216ENST00000636876 USP17L23D6RBM5 183 aa10.54□□□□□ -0.72
CLN6-216ENST00000636876 PMVKQ15126 192 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms