RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 RPP21Q9H633 154 aaKnown RBP12.27□□□□□ -0.45
TARDBP-228ENST00000629725 CAMPP49913 170 aa12.26□□□□□ -0.45
TARDBP-228ENST00000629725 SLC51BQ86UW2 128 aa12.26□□□□□ -0.45
TARDBP-228ENST00000629725 TCTE3Q8IZS6 198 aa12.26□□□□□ -0.45
TARDBP-228ENST00000629725 ISOC2Q96AB3 205 aa12.26□□□□□ -0.45
TARDBP-228ENST00000629725 RPL39LQ96EH5 51 aaKnown RBP12.26□□□□□ -0.45
TARDBP-228ENST00000629725 CNFNQ9BYD5 112 aa12.26□□□□□ -0.45
TARDBP-228ENST00000629725 K7EN84 100 aa12.25□□□□□ -0.45
TARDBP-228ENST00000629725 TAGLN2P37802 199 aaKnown RBP12.25□□□□□ -0.45
TARDBP-228ENST00000629725 OCC1Q8TAD7 63 aa12.25□□□□□ -0.45
TARDBP-228ENST00000629725 SS18Q15532 418 aa12.24□□□□□ -0.45
TARDBP-228ENST00000629725 CD164L2Q6UWJ8 174 aa12.24□□□□□ -0.45
TARDBP-228ENST00000629725 C9orf116Q5BN46 136 aaPredicted RBP12.23□□□□□ -0.45
TARDBP-228ENST00000629725 DIRC1Q969H9 104 aa12.23□□□□□ -0.45
TARDBP-228ENST00000629725 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
TARDBP-228ENST00000629725 SDHAF1A6NFY7 115 aa12.22□□□□□ -0.45
TARDBP-228ENST00000629725 PHF5AQ7RTV0 110 aaKnown RBP12.21□□□□□ -0.45
TARDBP-228ENST00000629725 NUP35Q8NFH5 326 aa12.21□□□□□ -0.45
TARDBP-228ENST00000629725 I3L3M4 83 aa12.2□□□□□ -0.46
TARDBP-228ENST00000629725 APOMO95445 188 aa12.2□□□□□ -0.46
TARDBP-228ENST00000629725 PMCHP20382 165 aa12.2□□□□□ -0.46
TARDBP-228ENST00000629725 FOXA3P55318 350 aaPredicted RBP12.2□□□□□ -0.46
TARDBP-228ENST00000629725 PRR4Q16378 134 aa12.2□□□□□ -0.46
TARDBP-228ENST00000629725 SMIM15Q7Z3B0 74 aa12.2□□□□□ -0.46
TARDBP-228ENST00000629725 IGLV7-43P04211 117 aa12.19□□□□□ -0.46
TARDBP-228ENST00000629725 TEX261Q6UWH6 196 aa12.19□□□□□ -0.46
TARDBP-228ENST00000629725 CAMK2N2Q96S95 79 aa12.19□□□□□ -0.46
TARDBP-228ENST00000629725 MALP21145 153 aa12.18□□□□□ -0.46
TARDBP-228ENST00000629725 RPL18AQ02543 176 aaKnown RBP12.18□□□□□ -0.46
TARDBP-228ENST00000629725 CDC42SE2Q9NRR3 84 aa12.18□□□□□ -0.46
TARDBP-228ENST00000629725 H0Y9J4 135 aa12.17□□□□□ -0.46
TARDBP-228ENST00000629725 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.17□□□□□ -0.46
TARDBP-228ENST00000629725 GATCO43716 136 aaKnown RBP12.17□□□□□ -0.46
TARDBP-228ENST00000629725 ESDP10768 282 aa12.17□□□□□ -0.46
TARDBP-228ENST00000629725 MRAP2Q96G30 205 aa12.17□□□□□ -0.46
TARDBP-228ENST00000629725 IGLV1-50A0A075B6I6 118 aa12.16□□□□□ -0.46
TARDBP-228ENST00000629725 TMEM250H0YL14 139 aa12.16□□□□□ -0.46
TARDBP-228ENST00000629725 A8MWL6 223 aa12.15□□□□□ -0.46
TARDBP-228ENST00000629725 COX7A2LO14548 114 aa12.15□□□□□ -0.46
TARDBP-228ENST00000629725 ALKAL2Q6UX46 152 aa12.15□□□□□ -0.46
TARDBP-228ENST00000629725 TSHBP01222 138 aa12.14□□□□□ -0.47
TARDBP-228ENST00000629725 CEBPGP53567 150 aa12.14□□□□□ -0.47
TARDBP-228ENST00000629725 BLOC1S1P78537 153 aa12.14□□□□□ -0.47
TARDBP-228ENST00000629725 FAM231DQ6ZW35 169 aa12.14□□□□□ -0.47
TARDBP-228ENST00000629725 MRPL52Q86TS9 123 aaKnown RBP12.14□□□□□ -0.47
TARDBP-228ENST00000629725 A0A087WZ39 114 aa12.13□□□□□ -0.47
TARDBP-228ENST00000629725 TRBV6-5A0A0K0K1A5 114 aa12.13□□□□□ -0.47
TARDBP-228ENST00000629725 KRTAP9-6A0A140TA67 174 aa12.13□□□□□ -0.47
TARDBP-228ENST00000629725 C1orf196B1AJZ1 125 aa12.13□□□□□ -0.47
TARDBP-228ENST00000629725 C2orf48Q96LS8 159 aa12.13□□□□□ -0.47
TARDBP-228ENST00000629725 OPRPNQ99935 248 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-228ENST00000629725 TMEM242Q9NWH2 141 aa12.13□□□□□ -0.47
TARDBP-228ENST00000629725 FAT4Q6V0I7 4981 aa12.13□□□□□ -0.47
TARDBP-228ENST00000629725 TSKUQ8WUA8 353 aa12.12□□□□□ -0.47
TARDBP-228ENST00000629725 FAM210AQ96ND0 272 aa12.12□□□□□ -0.47
TARDBP-228ENST00000629725 UBE2D1P51668 147 aa12.11□□□□□ -0.47
TARDBP-228ENST00000629725 CT83Q5H943 113 aa12.11□□□□□ -0.47
TARDBP-228ENST00000629725 AKAP14Q86UN6 197 aa12.11□□□□□ -0.47
TARDBP-228ENST00000629725 BORCS7Q96B45 105 aa12.11□□□□□ -0.47
TARDBP-228ENST00000629725 ST20Q9HBF5 79 aa12.11□□□□□ -0.47
TARDBP-228ENST00000629725 KRTAP1-4P0C5Y4 121 aa12.1□□□□□ -0.47
TARDBP-228ENST00000629725 C7orf77A4D0Y5 90 aa12.09□□□□□ -0.47
TARDBP-228ENST00000629725 RNF151Q2KHN1 245 aa12.09□□□□□ -0.47
TARDBP-228ENST00000629725 LCE2AQ5TA79 106 aaPredicted RBP12.09□□□□□ -0.47
TARDBP-228ENST00000629725 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.48
TARDBP-228ENST00000629725 KRTAP11-1Q8IUC1 163 aa12.08□□□□□ -0.48
TARDBP-228ENST00000629725 SMIM7Q9BQ49 75 aa12.08□□□□□ -0.48
TARDBP-228ENST00000629725 hCG_2014768A0A024R1R8 64 aa12.07□□□□□ -0.48
TARDBP-228ENST00000629725 A0A1B0GUT8 65 aa12.07□□□□□ -0.48
TARDBP-228ENST00000629725 HIGD1CA8MV81 97 aa12.07□□□□□ -0.48
TARDBP-228ENST00000629725 SPAG11BQ08648 103 aa12.07□□□□□ -0.48
TARDBP-228ENST00000629725 C5orf38Q86SI9 138 aa12.07□□□□□ -0.48
TARDBP-228ENST00000629725 EIF5A2Q9GZV4 153 aaKnown RBP12.07□□□□□ -0.48
TARDBP-228ENST00000629725 FAM168BA1KXE4 195 aa12.06□□□□□ -0.48
TARDBP-228ENST00000629725 LINC01551Q86U37 167 aa12.06□□□□□ -0.48
TARDBP-228ENST00000629725 TMEM191AQ9H0A3 160 aa12.06□□□□□ -0.48
TARDBP-228ENST00000629725 TRAV13-1A0A0B4J241 112 aa12.05□□□□□ -0.48
TARDBP-228ENST00000629725 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
TARDBP-228ENST00000629725 POLR2KP53803 58 aaKnown RBP12.05□□□□□ -0.48
TARDBP-228ENST00000629725 RNASE13Q5GAN3 156 aaKnown RBP12.05□□□□□ -0.48
TARDBP-228ENST00000629725 IMMP2LQ96T52 175 aa12.05□□□□□ -0.48
TARDBP-228ENST00000629725 CSDC2Q9Y534 153 aaKnown RBP12.05□□□□□ -0.48
TARDBP-228ENST00000629725 ZNF727A8MUV8 499 aa12.04□□□□□ -0.48
TARDBP-228ENST00000629725 RAB4AP20338 218 aa12.04□□□□□ -0.48
TARDBP-228ENST00000629725 MRPL35Q9NZE8 188 aaKnown RBP12.04□□□□□ -0.48
TARDBP-228ENST00000629725 FAM19A5Q7Z5A7 132 aaPredicted RBP12.03□□□□□ -0.48
TARDBP-228ENST00000629725 AMN1Q8IY45 258 aa12.03□□□□□ -0.48
TARDBP-228ENST00000629725 OR10D4PQ8NGN7 298 aa12.03□□□□□ -0.48
TARDBP-228ENST00000629725 OSTCQ9NRP0 149 aa12.03□□□□□ -0.48
TARDBP-228ENST00000629725 SMAGPQ0VAQ4 97 aa12.02□□□□□ -0.49
TARDBP-228ENST00000629725 UBE2D4Q9Y2X8 147 aa12.02□□□□□ -0.49
TARDBP-228ENST00000629725 SMKR1H3BMG3 65 aa12.01□□□□□ -0.49
TARDBP-228ENST00000629725 SRP19P09132 144 aaKnown RBP12.01□□□□□ -0.49
TARDBP-228ENST00000629725 FCER1GP30273 86 aa12.01□□□□□ -0.49
TARDBP-228ENST00000629725 UBE2BP63146 152 aa12□□□□□ -0.49
TARDBP-228ENST00000629725 CARHSP1Q9Y2V2 147 aaKnown RBP12□□□□□ -0.49
TARDBP-228ENST00000629725 F8WDY8 70 aa11.99□□□□□ -0.49
TARDBP-228ENST00000629725 NDUFA1O15239 70 aa11.99□□□□□ -0.49
TARDBP-228ENST00000629725 TLX1NBP0CAT3 122 aa11.99□□□□□ -0.49
TARDBP-228ENST00000629725 RIGQ13278 110 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms