RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 TRAV12-3A0A0B4J271 114 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 ATOX1O00244 68 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 IGHG2P01859 326 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 INAFM2P0DMQ5 153 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 SAA4P35542 130 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 DEFB1P60022 68 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 ZNF415Q09FC8 603 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 C2orf48Q96LS8 159 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 PIMREGQ9BSJ6 248 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 ZNF580Q9UK33 172 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 J3KT08 172 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 TRBV12-3P01733 135 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 HERVK_113P63121 156 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 FAM74A4Q5TZK3 123 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 CHCHD7Q9BUK0 85 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 DAZ1Q9NQZ3 744 aaKnown RBP3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 UBE2D4Q9Y2X8 147 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 NACAE9PAV3 2078 aa3.04□□□□□ -1.92
PTP4A1-205ENST00000626021 IGLV5-39A0A0G2JS06 123 aa3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 SMIM9A6NGZ8 99 aa3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 DAZ2Q13117 558 aaKnown RBP3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 CEMP1Q6PRD7 247 aaPredicted RBP3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 DAZ4Q86SG3 579 aaKnown RBP3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 TMEM219Q86XT9 240 aa3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 LINC00308Q8TCZ7 52 aa3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 SMCR5Q8TEV8 140 aa3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 CCL19Q99731 98 aa3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 OVOL2Q9BRP0 275 aa3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 DAZ3Q9NR90 486 aaKnown RBP3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 CSDC2Q9Y534 153 aaKnown RBP3.03□□□□□ -1.92
PTP4A1-205ENST00000626021 A0A096LNT2 108 aa3.03□□□□□ -1.93
PTP4A1-205ENST00000626021 IGHV4-61A0A0C4DH41 118 aa3.03□□□□□ -1.93
PTP4A1-205ENST00000626021 A8MTW9 85 aa3.03□□□□□ -1.93
PTP4A1-205ENST00000626021 K7EQG2 157 aa3.03□□□□□ -1.93
PTP4A1-205ENST00000626021 BAALC-AS2P0C853 105 aa3.03□□□□□ -1.93
PTP4A1-205ENST00000626021 DSCR9P59020 149 aa3.03□□□□□ -1.93
PTP4A1-205ENST00000626021 Q6ZSV7 163 aa3.03□□□□□ -1.93
PTP4A1-205ENST00000626021 DEFB104AQ8WTQ1 72 aa3.03□□□□□ -1.93
PTP4A1-205ENST00000626021 LINC00527Q9UJ94 153 aa3.03□□□□□ -1.93
PTP4A1-205ENST00000626021 C22orf24Q9Y442 160 aa3.03□□□□□ -1.93
PTP4A1-205ENST00000626021 MED13LQ71F56 2210 aa3.02□□□□□ -1.93
PTP4A1-205ENST00000626021 MYO18BQ8IUG5 2567 aa3.02□□□□□ -1.93
PTP4A1-205ENST00000626021 TMEM89A2RUT3 159 aa3.02□□□□□ -1.93
PTP4A1-205ENST00000626021 A6NDX4 124 aa3.02□□□□□ -1.93
PTP4A1-205ENST00000626021 RPL28P46779 137 aaKnown RBP3.02□□□□□ -1.93
PTP4A1-205ENST00000626021 SNRPD3P62318 126 aaKnown RBP3.02□□□□□ -1.93
PTP4A1-205ENST00000626021 GAGE2AQ6NT46 116 aa3.02□□□□□ -1.93
PTP4A1-205ENST00000626021 OR13C6PQ8NH95 151 aa3.02□□□□□ -1.93
PTP4A1-205ENST00000626021 IGHV3OR16-10A0A075B7F0 116 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 TMEM258P61165 79 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 CFHR3Q02985 330 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 HIST2H2BCQ6DN03 193 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 HIST2H2BDQ6DRA6 164 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 Q6JHZ5 121 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 DUX5Q96PT3 197 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 LINC00467Q9BRT7 94 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 CDKN2A-AS1Q9UH64 79 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 KMT2BQ9UMN6 2715 aaPredicted RBP3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 IGHV4-30-2A0A087WSY4 118 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 TRAV13-2A0A0B4J235 113 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 FSHBP01225 129 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 RNASE1P07998 156 aaKnown RBP3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 MSMBP08118 114 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 MALP21145 153 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 ATP5J2P56134 94 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 NPC2P61916 151 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 RPL18AQ02543 176 aaKnown RBP3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 FAM19A5Q7Z5A7 132 aaPredicted RBP3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 ZNF843Q8N446 348 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 OBSCN-AS1Q96MR7 158 aa3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 BBC3Q96PG8 261 aaPredicted RBP3.01□□□□□ -1.93
PTP4A1-205ENST00000626021 IGKV3-7A0A075B6H7 116 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 TRAV12-2A0A075B6T6 113 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 A8MZ25 164 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 H0YGX0 51 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 J3QLI3 93 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 IGHV3-11P01762 117 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 IGHV3-53P01767 116 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 SOSTDC1Q6X4U4 206 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 PRIMA1Q86XR5 153 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 C3orf56Q8N813 242 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 ZNF625Q96I27 306 aaPredicted RBP3□□□□□ -1.93
PTP4A1-205ENST00000626021 Q9H8V8 135 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 UTP20O75691 2785 aaKnown RBP3□□□□□ -1.93
PTP4A1-205ENST00000626021 ZNF462Q96JM2 2506 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 SPTAN1Q13813 2472 aaKnown RBP3□□□□□ -1.93
PTP4A1-205ENST00000626021 LOC107984640A0A0U1RRK4 108 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 NDUFC2-KCTD14E9PQ53 114 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 RS1O15537 224 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 SPINK13Q1W4C9 94 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 SERP2Q8N6R1 65 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 DPH3Q96FX2 82 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 UPK3BQ9BT76 320 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 KLK5Q9Y337 293 aaPredicted RBP3□□□□□ -1.93
PTP4A1-205ENST00000626021 RELNP78509 3460 aa3□□□□□ -1.93
PTP4A1-205ENST00000626021 LRRK2Q5S007 2527 aa2.99□□□□□ -1.93
PTP4A1-205ENST00000626021 ZFYVE26Q68DK2 2539 aa2.99□□□□□ -1.93
PTP4A1-205ENST00000626021 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.99□□□□□ -1.93
PTP4A1-205ENST00000626021 IGHV3OR16-12A0A075B7B8 117 aa2.99□□□□□ -1.93
PTP4A1-205ENST00000626021 IGKV2-29A2NJV5 120 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms