RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 C10orf126Q8N4M7 172 aa13.36□□□□□ -0.27
R3HCC1-210ENST00000625275 A0A087WTM6 91 aa13.36□□□□□ -0.27
R3HCC1-210ENST00000625275 RPL39P62891 51 aaKnown RBP13.36□□□□□ -0.27
R3HCC1-210ENST00000625275 A0A1B0GUV1 79 aa13.35□□□□□ -0.27
R3HCC1-210ENST00000625275 LINC00614P0C842 121 aa13.35□□□□□ -0.27
R3HCC1-210ENST00000625275 FUSP35637 526 aaKnown RBP eCLIP13.35□□□□□ -0.27
R3HCC1-210ENST00000625275 IGLV4-60A0A075B6I1 120 aa13.34□□□□□ -0.27
R3HCC1-210ENST00000625275 Q0VG73 95 aa13.34□□□□□ -0.27
R3HCC1-210ENST00000625275 AMMECR1LQ6DCA0 310 aa13.34□□□□□ -0.27
R3HCC1-210ENST00000625275 RNASEKQ6P5S7 137 aaKnown RBP13.34□□□□□ -0.27
R3HCC1-210ENST00000625275 MRPL52Q86TS9 123 aaKnown RBP13.34□□□□□ -0.27
R3HCC1-210ENST00000625275 TMEM18Q96B42 140 aa13.34□□□□□ -0.27
R3HCC1-210ENST00000625275 AP5S1Q9NUS5 200 aa13.34□□□□□ -0.27
R3HCC1-210ENST00000625275 HIST1H2BKO60814 126 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 HIST1H2BJP06899 126 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 HIST1H2BOP23527 126 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 HIST1H2BBP33778 126 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 HIST1H2BDP58876 126 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 HIST1H2BCP62807 126 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 HIST2H2BEQ16778 126 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 HIST1H2BHQ93079 126 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 HIST1H2BNQ99877 126 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 HIST1H2BMQ99879 126 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 KLK12Q9UKR0 248 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 UBE2D4Q9Y2X8 147 aa13.33□□□□□ -0.28
R3HCC1-210ENST00000625275 ANGP03950 147 aaKnown RBP13.32□□□□□ -0.28
R3HCC1-210ENST00000625275 ZNF25P17030 456 aaPredicted RBP13.32□□□□□ -0.28
R3HCC1-210ENST00000625275 RAB5BP61020 215 aa13.32□□□□□ -0.28
R3HCC1-210ENST00000625275 C2orf66Q6UXQ4 117 aa13.32□□□□□ -0.28
R3HCC1-210ENST00000625275 BAGE3Q86Y29 109 aa13.32□□□□□ -0.28
R3HCC1-210ENST00000625275 IBA57-AS1B1ANH7 110 aa13.3□□□□□ -0.28
R3HCC1-210ENST00000625275 TIMM21Q9BVV7 248 aa13.3□□□□□ -0.28
R3HCC1-210ENST00000625275 CYSLTR1Q9Y271 337 aa13.3□□□□□ -0.28
R3HCC1-210ENST00000625275 LINC00269Q8N2A0 174 aa13.29□□□□□ -0.28
R3HCC1-210ENST00000625275 OR5A1Q8NGJ0 315 aa13.29□□□□□ -0.28
R3HCC1-210ENST00000625275 TMEM101Q96IK0 257 aa13.29□□□□□ -0.28
R3HCC1-210ENST00000625275 CSDC2Q9Y534 153 aaKnown RBP13.29□□□□□ -0.28
R3HCC1-210ENST00000625275 C1orf196B1AJZ1 125 aa13.29□□□□□ -0.28
R3HCC1-210ENST00000625275 LINC00310P59036 64 aa13.29□□□□□ -0.28
R3HCC1-210ENST00000625275 SMAGPQ0VAQ4 97 aa13.29□□□□□ -0.28
R3HCC1-210ENST00000625275 CHCHD1Q96BP2 118 aaKnown RBP13.29□□□□□ -0.28
R3HCC1-210ENST00000625275 SPANXA1Q9NS26 97 aa13.29□□□□□ -0.28
R3HCC1-210ENST00000625275 A0A096LNJ9 63 aa13.28□□□□□ -0.28
R3HCC1-210ENST00000625275 SERF1AO75920 110 aa13.28□□□□□ -0.28
R3HCC1-210ENST00000625275 G0S2P27469 103 aa13.28□□□□□ -0.28
R3HCC1-210ENST00000625275 PMCHL1Q16048 86 aa13.28□□□□□ -0.28
R3HCC1-210ENST00000625275 DGAT2L7PQ6IED9 249 aa13.28□□□□□ -0.28
R3HCC1-210ENST00000625275 CLPSL2Q6UWE3 100 aa13.28□□□□□ -0.28
R3HCC1-210ENST00000625275 UBE2WQ96B02 151 aa13.28□□□□□ -0.28
R3HCC1-210ENST00000625275 TOMM6Q96B49 74 aa13.28□□□□□ -0.28
R3HCC1-210ENST00000625275 PRR34Q9NV39 138 aa13.28□□□□□ -0.28
R3HCC1-210ENST00000625275 ENHOQ6UWT2 76 aa13.27□□□□□ -0.29
R3HCC1-210ENST00000625275 FAM104AQ969W3 186 aa13.27□□□□□ -0.29
R3HCC1-210ENST00000625275 CDC42SE2Q9NRR3 84 aa13.27□□□□□ -0.29
R3HCC1-210ENST00000625275 PSCAO43653 123 aa13.26□□□□□ -0.29
R3HCC1-210ENST00000625275 Q6ZUT4 128 aa13.26□□□□□ -0.29
R3HCC1-210ENST00000625275 ZNF664Q8N3J9 261 aa13.26□□□□□ -0.29
R3HCC1-210ENST00000625275 OPRPNQ99935 248 aaPredicted RBP13.26□□□□□ -0.29
R3HCC1-210ENST00000625275 Q9HAA7 133 aa13.26□□□□□ -0.29
R3HCC1-210ENST00000625275 PYGO1Q9Y3Y4 419 aa13.26□□□□□ -0.29
R3HCC1-210ENST00000625275 IGIPA6NJ69 53 aa13.25□□□□□ -0.29
R3HCC1-210ENST00000625275 CRPP02741 224 aa13.25□□□□□ -0.29
R3HCC1-210ENST00000625275 KRTAP10-1P60331 282 aa13.25□□□□□ -0.29
R3HCC1-210ENST00000625275 REG3AQ06141 175 aa13.25□□□□□ -0.29
R3HCC1-210ENST00000625275 TRAV8-3A0A0A6YYJ7 113 aa13.24□□□□□ -0.29
R3HCC1-210ENST00000625275 HSBP1O75506 76 aa13.24□□□□□ -0.29
R3HCC1-210ENST00000625275 HBDP02042 147 aa13.24□□□□□ -0.29
R3HCC1-210ENST00000625275 RNASE13Q5GAN3 156 aaKnown RBP13.24□□□□□ -0.29
R3HCC1-210ENST00000625275 NUPR1O60356 82 aa13.23□□□□□ -0.29
R3HCC1-210ENST00000625275 XGP55808 180 aa13.23□□□□□ -0.29
R3HCC1-210ENST00000625275 MRPS36P82909 103 aaKnown RBP13.23□□□□□ -0.29
R3HCC1-210ENST00000625275 IGLV4-3A0A075B6K6 122 aa13.23□□□□□ -0.29
R3HCC1-210ENST00000625275 LRCOL1A6NCL2 159 aa13.23□□□□□ -0.29
R3HCC1-210ENST00000625275 EPM2AB3EWF7 344 aa13.23□□□□□ -0.29
R3HCC1-210ENST00000625275 SCGB3A1Q96QR1 104 aa13.23□□□□□ -0.29
R3HCC1-210ENST00000625275 IGKV3OR2-268A0A0C4DH90 116 aa13.22□□□□□ -0.29
R3HCC1-210ENST00000625275 LINC01549A6NIU2 74 aa13.22□□□□□ -0.29
R3HCC1-210ENST00000625275 GCSHP23434 173 aa13.22□□□□□ -0.29
R3HCC1-210ENST00000625275 MIAQ16674 131 aa13.22□□□□□ -0.29
R3HCC1-210ENST00000625275 ERASQ7Z444 233 aa13.22□□□□□ -0.29
R3HCC1-210ENST00000625275 FAM19A2Q8N3H0 131 aa13.22□□□□□ -0.29
R3HCC1-210ENST00000625275 TIMM17AQ99595 171 aa13.22□□□□□ -0.29
R3HCC1-210ENST00000625275 TMEM141Q96I45 108 aa13.21□□□□□ -0.3
R3HCC1-210ENST00000625275 NPSP0C0P6 89 aa13.2□□□□□ -0.3
R3HCC1-210ENST00000625275 PDZD11Q5EBL8 140 aa13.2□□□□□ -0.3
R3HCC1-210ENST00000625275 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
R3HCC1-210ENST00000625275 IGLV10-54A0A075B6I4 117 aa13.19□□□□□ -0.3
R3HCC1-210ENST00000625275 IGLV5-52A0A0A0MRZ9 124 aa13.19□□□□□ -0.3
R3HCC1-210ENST00000625275 COA6Q5JTJ3 125 aaKnown RBP13.19□□□□□ -0.3
R3HCC1-210ENST00000625275 IGKV2D-24A0A075B6R9 120 aa13.18□□□□□ -0.3
R3HCC1-210ENST00000625275 NDUFA6P56556 154 aa13.18□□□□□ -0.3
R3HCC1-210ENST00000625275 LINC00959A0A1B0GUT2 108 aa13.17□□□□□ -0.3
R3HCC1-210ENST00000625275 ZC2HC1BQ5TFG8 222 aa13.17□□□□□ -0.3
R3HCC1-210ENST00000625275 Q6ZN92 141 aa13.17□□□□□ -0.3
R3HCC1-210ENST00000625275 LINC00173Q6ZV60 143 aa13.17□□□□□ -0.3
R3HCC1-210ENST00000625275 Q8N814 137 aa13.17□□□□□ -0.3
R3HCC1-210ENST00000625275 C1orf43Q9BWL3 253 aa13.17□□□□□ -0.3
R3HCC1-210ENST00000625275 TRAV8-4A0A0B4J246 113 aa13.16□□□□□ -0.3
R3HCC1-210ENST00000625275 TEX43Q6ZNM6 134 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms