RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 PRSS2P07478 247 aa11.03□□□□□ -0.64
LINC00552-201ENST00000625151 C11orf72Q8NBR9 251 aa11.03□□□□□ -0.64
LINC00552-201ENST00000625151 VSIG2Q96IQ7 327 aa11.03□□□□□ -0.64
LINC00552-201ENST00000625151 WFDC11Q8NEX6 87 aa11.02□□□□□ -0.65
LINC00552-201ENST00000625151 MAP6D1Q9H9H5 199 aa11.02□□□□□ -0.65
LINC00552-201ENST00000625151 TRIAP1O43715 76 aa11.02□□□□□ -0.65
LINC00552-201ENST00000625151 LRRC75A-AS1Q8N1F1 130 aa11.02□□□□□ -0.65
LINC00552-201ENST00000625151 NPC2P61916 151 aa11.01□□□□□ -0.65
LINC00552-201ENST00000625151 PIK3CD-AS1Q5SR53 167 aa11.01□□□□□ -0.65
LINC00552-201ENST00000625151 LINC01587Q99440 93 aa11.01□□□□□ -0.65
LINC00552-201ENST00000625151 IGHV4-31P0DP07 118 aa11.01□□□□□ -0.65
LINC00552-201ENST00000625151 SPANXDQ9BXN6 97 aa11.01□□□□□ -0.65
LINC00552-201ENST00000625151 SPANXCQ9NY87 97 aa11.01□□□□□ -0.65
LINC00552-201ENST00000625151 TLN2Q9Y4G6 2542 aa11.01□□□□□ -0.65
LINC00552-201ENST00000625151 FLNAP21333 2647 aaKnown RBP11.01□□□□□ -0.65
LINC00552-201ENST00000625151 M0QXV9 152 aa11□□□□□ -0.65
LINC00552-201ENST00000625151 ATXN8Q156A1 80 aa11□□□□□ -0.65
LINC00552-201ENST00000625151 LINC01620Q4KN68 170 aa11□□□□□ -0.65
LINC00552-201ENST00000625151 Q6ZSV7 163 aa11□□□□□ -0.65
LINC00552-201ENST00000625151 TRBV30A0A0K0K1B3 111 aa11□□□□□ -0.65
LINC00552-201ENST00000625151 IGHV3-53P01767 116 aa11□□□□□ -0.65
LINC00552-201ENST00000625151 MIAQ16674 131 aa10.99□□□□□ -0.65
LINC00552-201ENST00000625151 ZFAND6Q6FIF0 208 aa10.99□□□□□ -0.65
LINC00552-201ENST00000625151 PEMTQ9UBM1 199 aa10.99□□□□□ -0.65
LINC00552-201ENST00000625151 KHDC1LQ5JSQ8 128 aa10.99□□□□□ -0.65
LINC00552-201ENST00000625151 BEAN1Q3B7T3 259 aa10.98□□□□□ -0.65
LINC00552-201ENST00000625151 DYNLRB2Q8TF09 96 aa10.98□□□□□ -0.65
LINC00552-201ENST00000625151 NTN5Q8WTR8 489 aaPredicted RBP10.98□□□□□ -0.65
LINC00552-201ENST00000625151 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
LINC00552-201ENST00000625151 ANK3Q12955 4377 aaKnown RBP10.97□□□□□ -0.65
LINC00552-201ENST00000625151 GAGE12JA6NER3 117 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 GAGE7O76087 117 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 GAGE12FP0CL80 117 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 GAGE12GP0CL81 117 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 GAGE12IP0CL82 117 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 GAGE4Q13068 117 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.97□□□□□ -0.65
LINC00552-201ENST00000625151 DNAJC30Q96LL9 226 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 ICOSQ9Y6W8 199 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 INSP01308 110 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 Q8N2B8 174 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 TEX29Q8N6K0 151 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 C4orf3Q8WVX3 66 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 ACANP16112 2415 aa10.97□□□□□ -0.65
LINC00552-201ENST00000625151 RS1O15537 224 aa10.96□□□□□ -0.65
LINC00552-201ENST00000625151 DEFB114Q30KQ6 69 aa10.96□□□□□ -0.65
LINC00552-201ENST00000625151 DAND5Q8N907 189 aa10.96□□□□□ -0.65
LINC00552-201ENST00000625151 WNK1Q9H4A3 2382 aa10.96□□□□□ -0.66
LINC00552-201ENST00000625151 TMEM262E9PQX1 116 aa10.95□□□□□ -0.66
LINC00552-201ENST00000625151 CITED1Q99966 193 aa10.95□□□□□ -0.66
LINC00552-201ENST00000625151 XCL2Q9UBD3 114 aa10.95□□□□□ -0.66
LINC00552-201ENST00000625151 NOTCH2Q04721 2471 aa10.95□□□□□ -0.66
LINC00552-201ENST00000625151 TRBV10-2A0A0K0K1G8 114 aa10.95□□□□□ -0.66
LINC00552-201ENST00000625151 TEX49A0A1B0GTD5 131 aa10.95□□□□□ -0.66
LINC00552-201ENST00000625151 COX6A2Q02221 97 aa10.95□□□□□ -0.66
LINC00552-201ENST00000625151 TMEM101Q96IK0 257 aa10.94□□□□□ -0.66
LINC00552-201ENST00000625151 IGLV5-45A0A087WSX0 123 aa10.94□□□□□ -0.66
LINC00552-201ENST00000625151 NHLRC4P0CG21 123 aaPredicted RBP10.94□□□□□ -0.66
LINC00552-201ENST00000625151 LINC01600Q96MT4 127 aa10.94□□□□□ -0.66
LINC00552-201ENST00000625151 SONP18583 2426 aaKnown RBP10.94□□□□□ -0.66
LINC00552-201ENST00000625151 IGHV3OR16-12A0A075B7B8 117 aa10.93□□□□□ -0.66
LINC00552-201ENST00000625151 C5orf47Q569G3 176 aa10.93□□□□□ -0.66
LINC00552-201ENST00000625151 TIRAPP58753 221 aa10.93□□□□□ -0.66
LINC00552-201ENST00000625151 CLEC2BQ92478 149 aa10.93□□□□□ -0.66
LINC00552-201ENST00000625151 OTOGQ6ZRI0 2925 aa10.93□□□□□ -0.66
LINC00552-201ENST00000625151 ODF3L2Q3SX64 289 aa10.92□□□□□ -0.66
LINC00552-201ENST00000625151 DGAT2L7PQ6IED9 249 aa10.92□□□□□ -0.66
LINC00552-201ENST00000625151 NF1P21359 2839 aa10.92□□□□□ -0.66
LINC00552-201ENST00000625151 H7C423 109 aa10.92□□□□□ -0.66
LINC00552-201ENST00000625151 NDUFA1O15239 70 aa10.92□□□□□ -0.66
LINC00552-201ENST00000625151 TIMM17BO60830 172 aa10.92□□□□□ -0.66
LINC00552-201ENST00000625151 LINC00694P0DN24 101 aa10.92□□□□□ -0.66
LINC00552-201ENST00000625151 RPL13AP40429 203 aaKnown RBP10.91□□□□□ -0.66
LINC00552-201ENST00000625151 C1orf158Q8N1D5 194 aa10.91□□□□□ -0.66
LINC00552-201ENST00000625151 NDUFA7O95182 113 aa10.91□□□□□ -0.66
LINC00552-201ENST00000625151 CITED2Q99967 270 aaPredicted RBP10.91□□□□□ -0.66
LINC00552-201ENST00000625151 TRGV1A0A0A0MS02 117 aa10.9□□□□□ -0.66
LINC00552-201ENST00000625151 LINC00242Q5T6M2 205 aa10.9□□□□□ -0.66
LINC00552-201ENST00000625151 C2orf82Q6UX34 121 aa10.9□□□□□ -0.66
LINC00552-201ENST00000625151 COX6CP09669 75 aa10.9□□□□□ -0.66
LINC00552-201ENST00000625151 IFITM1P13164 125 aa10.9□□□□□ -0.66
LINC00552-201ENST00000625151 IL17DQ8TAD2 202 aa10.89□□□□□ -0.67
LINC00552-201ENST00000625151 UBE2WQ96B02 151 aa10.89□□□□□ -0.67
LINC00552-201ENST00000625151 IGLV5-39A0A0G2JS06 123 aa10.89□□□□□ -0.67
LINC00552-201ENST00000625151 NDUFV3P56181 108 aaKnown RBP10.89□□□□□ -0.67
LINC00552-201ENST00000625151 ZNF625Q96I27 306 aaPredicted RBP10.89□□□□□ -0.67
LINC00552-201ENST00000625151 Q9H8V8 135 aa10.89□□□□□ -0.67
LINC00552-201ENST00000625151 NIPBLQ6KC79 2804 aaeCLIP10.89□□□□□ -0.67
LINC00552-201ENST00000625151 LST1O00453 97 aa10.88□□□□□ -0.67
LINC00552-201ENST00000625151 STHQ8IWL8 128 aa10.88□□□□□ -0.67
LINC00552-201ENST00000625151 HERVK_113P63121 156 aa10.88□□□□□ -0.67
LINC00552-201ENST00000625151 KRTAP1-1Q07627 177 aa10.88□□□□□ -0.67
LINC00552-201ENST00000625151 NOTCH3Q9UM47 2321 aa10.88□□□□□ -0.67
LINC00552-201ENST00000625151 A0A0U1RRA0 63 aa10.87□□□□□ -0.67
LINC00552-201ENST00000625151 WIPF1O43516 503 aa10.87□□□□□ -0.67
LINC00552-201ENST00000625151 CRLF1O75462 422 aa10.87□□□□□ -0.67
LINC00552-201ENST00000625151 NTM-AS1Q6ZSK4 140 aa10.87□□□□□ -0.67
LINC00552-201ENST00000625151 C11orf44Q8N8P7 122 aa10.87□□□□□ -0.67
LINC00552-201ENST00000625151 LINC00308Q8TCZ7 52 aa10.87□□□□□ -0.67
LINC00552-201ENST00000625151 TMEM126AQ9H061 195 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms