RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 NAT8Q9UHE5 227 aa6.8□□□□□ -1.32
LINC00963-214ENST00000622680 F2Z2F3 143 aa6.79□□□□□ -1.32
LINC00963-214ENST00000622680 GAS8-AS1O95177 125 aa6.79□□□□□ -1.32
LINC00963-214ENST00000622680 APCSP02743 223 aa6.79□□□□□ -1.32
LINC00963-214ENST00000622680 XCL1P47992 114 aa6.79□□□□□ -1.32
LINC00963-214ENST00000622680 REG3GQ6UW15 175 aa6.79□□□□□ -1.32
LINC00963-214ENST00000622680 SPINK6Q6UWN8 80 aa6.79□□□□□ -1.32
LINC00963-214ENST00000622680 SMDT1Q9H4I9 107 aa6.79□□□□□ -1.32
LINC00963-214ENST00000622680 A8MWL6 223 aa6.78□□□□□ -1.32
LINC00963-214ENST00000622680 FGF6P10767 208 aa6.78□□□□□ -1.32
LINC00963-214ENST00000622680 RPL23P62829 140 aaKnown RBP6.78□□□□□ -1.32
LINC00963-214ENST00000622680 SMIM15Q7Z3B0 74 aa6.78□□□□□ -1.32
LINC00963-214ENST00000622680 CARD19Q96LW7 228 aa6.78□□□□□ -1.32
LINC00963-214ENST00000622680 CCL25O15444 150 aa6.77□□□□□ -1.33
LINC00963-214ENST00000622680 FOXA3P55318 350 aaPredicted RBP6.77□□□□□ -1.33
LINC00963-214ENST00000622680 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC00963-214ENST00000622680 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
LINC00963-214ENST00000622680 Q6ZRP5 223 aa6.76□□□□□ -1.33
LINC00963-214ENST00000622680 FAM231DQ6ZW35 169 aa6.76□□□□□ -1.33
LINC00963-214ENST00000622680 OR5A1Q8NGJ0 315 aa6.76□□□□□ -1.33
LINC00963-214ENST00000622680 ISOC2Q96AB3 205 aa6.76□□□□□ -1.33
LINC00963-214ENST00000622680 CNFNQ9BYD5 112 aa6.76□□□□□ -1.33
LINC00963-214ENST00000622680 OSTCQ9NRP0 149 aa6.76□□□□□ -1.33
LINC00963-214ENST00000622680 IGHV1-58A0A0C4DH39 117 aa6.75□□□□□ -1.33
LINC00963-214ENST00000622680 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
LINC00963-214ENST00000622680 FAM231BA6NCW3 169 aa6.75□□□□□ -1.33
LINC00963-214ENST00000622680 F8W036 122 aa6.75□□□□□ -1.33
LINC00963-214ENST00000622680 NCR2O95944 276 aa6.75□□□□□ -1.33
LINC00963-214ENST00000622680 LINC00474Q9P2X8 69 aa6.75□□□□□ -1.33
LINC00963-214ENST00000622680 TMEM218A2RU14 115 aa6.74□□□□□ -1.33
LINC00963-214ENST00000622680 HIGD1CA8MV81 97 aa6.74□□□□□ -1.33
LINC00963-214ENST00000622680 H7C423 109 aa6.74□□□□□ -1.33
LINC00963-214ENST00000622680 ZNF25P17030 456 aaPredicted RBP6.74□□□□□ -1.33
LINC00963-214ENST00000622680 PTTG1IPP53801 180 aa6.74□□□□□ -1.33
LINC00963-214ENST00000622680 SYCNQ0VAF6 134 aa6.74□□□□□ -1.33
LINC00963-214ENST00000622680 GAGE2BQ13066 116 aa6.74□□□□□ -1.33
LINC00963-214ENST00000622680 UQCC3Q6UW78 93 aa6.74□□□□□ -1.33
LINC00963-214ENST00000622680 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
LINC00963-214ENST00000622680 TMEM242Q9NWH2 141 aa6.74□□□□□ -1.33
LINC00963-214ENST00000622680 NDUFA5Q16718 116 aa6.73□□□□□ -1.33
LINC00963-214ENST00000622680 CT83Q5H943 113 aa6.73□□□□□ -1.33
LINC00963-214ENST00000622680 TMEM101Q96IK0 257 aa6.73□□□□□ -1.33
LINC00963-214ENST00000622680 BTF3L4Q96K17 158 aa6.73□□□□□ -1.33
LINC00963-214ENST00000622680 PKIGQ9Y2B9 76 aa6.73□□□□□ -1.33
LINC00963-214ENST00000622680 V9GYV3 84 aa6.73□□□□□ -1.33
LINC00963-214ENST00000622680 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 A0A1W2PNN7 141 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 I3L3M4 83 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 ZNF561-AS1K7EIQ3 104 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 TSHBP01222 138 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 MT-ND4LP03901 98 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 PMCHP20382 165 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 CAMPP49913 170 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 RIGQ13278 110 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 NAT8BQ9UHF3 227 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 PSORS1C2Q9UIG4 136 aa6.72□□□□□ -1.33
LINC00963-214ENST00000622680 MUC2Q02817 5179 aa6.71□□□□□ -1.33
LINC00963-214ENST00000622680 IGLV4-69A0A075B6H9 119 aa6.71□□□□□ -1.34
LINC00963-214ENST00000622680 LOC107984640A0A0U1RRK4 108 aa6.71□□□□□ -1.34
LINC00963-214ENST00000622680 ESDP10768 282 aa6.71□□□□□ -1.34
LINC00963-214ENST00000622680 ADCYAP1P18509 176 aa6.71□□□□□ -1.34
LINC00963-214ENST00000622680 SS18Q15532 418 aa6.71□□□□□ -1.34
LINC00963-214ENST00000622680 MRPL54Q6P161 138 aaKnown RBP6.71□□□□□ -1.34
LINC00963-214ENST00000622680 CD164L2Q6UWJ8 174 aa6.71□□□□□ -1.34
LINC00963-214ENST00000622680 NUP35Q8NFH5 326 aa6.71□□□□□ -1.34
LINC00963-214ENST00000622680 MRAP2Q96G30 205 aa6.71□□□□□ -1.34
LINC00963-214ENST00000622680 PPP1R2P9O14990 202 aa6.7□□□□□ -1.34
LINC00963-214ENST00000622680 PNRC1Q12796 327 aaPredicted RBP6.7□□□□□ -1.34
LINC00963-214ENST00000622680 RNASE13Q5GAN3 156 aaKnown RBP6.7□□□□□ -1.34
LINC00963-214ENST00000622680 CDC42SE2Q9NRR3 84 aa6.7□□□□□ -1.34
LINC00963-214ENST00000622680 TRBV6-5A0A0K0K1A5 114 aa6.69□□□□□ -1.34
LINC00963-214ENST00000622680 MT-ND6P03923 174 aa6.69□□□□□ -1.34
LINC00963-214ENST00000622680 RPL18AQ02543 176 aaKnown RBP6.69□□□□□ -1.34
LINC00963-214ENST00000622680 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
LINC00963-214ENST00000622680 PHF5AQ7RTV0 110 aaKnown RBP6.69□□□□□ -1.34
LINC00963-214ENST00000622680 ZNF664Q8N3J9 261 aa6.69□□□□□ -1.34
LINC00963-214ENST00000622680 SEC11CQ9BY50 192 aa6.69□□□□□ -1.34
LINC00963-214ENST00000622680 ST20Q9HBF5 79 aa6.69□□□□□ -1.34
LINC00963-214ENST00000622680 SMIM27A0A1W2PRY6 76 aa6.68□□□□□ -1.34
LINC00963-214ENST00000622680 C7orf77A4D0Y5 90 aa6.68□□□□□ -1.34
LINC00963-214ENST00000622680 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.68□□□□□ -1.34
LINC00963-214ENST00000622680 APOC3P02656 99 aa6.68□□□□□ -1.34
LINC00963-214ENST00000622680 C1orf137Q5JT78 98 aa6.68□□□□□ -1.34
LINC00963-214ENST00000622680 MRPL52Q86TS9 123 aaKnown RBP6.68□□□□□ -1.34
LINC00963-214ENST00000622680 PRR26Q8N8Z3 221 aa6.68□□□□□ -1.34
LINC00963-214ENST00000622680 CAMK2N2Q96S95 79 aa6.68□□□□□ -1.34
LINC00963-214ENST00000622680 COX7A2LO14548 114 aa6.67□□□□□ -1.34
LINC00963-214ENST00000622680 APOMO95445 188 aa6.67□□□□□ -1.34
LINC00963-214ENST00000622680 MALP21145 153 aa6.67□□□□□ -1.34
LINC00963-214ENST00000622680 C10orf91Q5T1B1 145 aa6.67□□□□□ -1.34
LINC00963-214ENST00000622680 AMN1Q8IY45 258 aa6.67□□□□□ -1.34
LINC00963-214ENST00000622680 ANAPC16Q96DE5 110 aa6.67□□□□□ -1.34
LINC00963-214ENST00000622680 OPRPNQ99935 248 aaPredicted RBP6.67□□□□□ -1.34
LINC00963-214ENST00000622680 SMKR1H3BMG3 65 aa6.66□□□□□ -1.34
LINC00963-214ENST00000622680 S100A8P05109 93 aa6.66□□□□□ -1.34
LINC00963-214ENST00000622680 POLR2KP53803 58 aaKnown RBP6.66□□□□□ -1.34
LINC00963-214ENST00000622680 HBBP68871 147 aa6.66□□□□□ -1.34
LINC00963-214ENST00000622680 CARHSP1Q9Y2V2 147 aaKnown RBP6.66□□□□□ -1.34
LINC00963-214ENST00000622680 TRAV13-1A0A0B4J241 112 aa6.65□□□□□ -1.34
LINC00963-214ENST00000622680 TRBV27A0A0K0K1C4 114 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms