RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 NAT8Q9UHE5 227 aa12.29□□□□□ -0.44
LTBP4-239ENST00000622565 NAT8BQ9UHF3 227 aa12.29□□□□□ -0.44
LTBP4-239ENST00000622565 PKHD1L1Q86WI1 4243 aa12.28□□□□□ -0.44
LTBP4-239ENST00000622565 LINC00959A0A1B0GUT2 108 aa12.28□□□□□ -0.44
LTBP4-239ENST00000622565 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.27□□□□□ -0.45
LTBP4-239ENST00000622565 SMIM27A0A1W2PRY6 76 aa12.27□□□□□ -0.45
LTBP4-239ENST00000622565 XCL1P47992 114 aa12.27□□□□□ -0.45
LTBP4-239ENST00000622565 MRPL51Q4U2R6 128 aaKnown RBP12.27□□□□□ -0.45
LTBP4-239ENST00000622565 MRPL52Q86TS9 123 aaKnown RBP12.27□□□□□ -0.45
LTBP4-239ENST00000622565 CDC42SE2Q9NRR3 84 aa12.27□□□□□ -0.45
LTBP4-239ENST00000622565 GVQW2A0A096LPI5 108 aaPredicted RBP12.26□□□□□ -0.45
LTBP4-239ENST00000622565 CCL25O15444 150 aa12.26□□□□□ -0.45
LTBP4-239ENST00000622565 PEA15Q15121 130 aa12.26□□□□□ -0.45
LTBP4-239ENST00000622565 CFAP161Q6P656 301 aa12.26□□□□□ -0.45
LTBP4-239ENST00000622565 SPACA4Q8TDM5 124 aa12.26□□□□□ -0.45
LTBP4-239ENST00000622565 TMEM101Q96IK0 257 aa12.26□□□□□ -0.45
LTBP4-239ENST00000622565 BTF3L4Q96K17 158 aa12.26□□□□□ -0.45
LTBP4-239ENST00000622565 A0A087WYN8 130 aa12.25□□□□□ -0.45
LTBP4-239ENST00000622565 C7orf77A4D0Y5 90 aa12.25□□□□□ -0.45
LTBP4-239ENST00000622565 FAM104BQ5XKR9 115 aa12.25□□□□□ -0.45
LTBP4-239ENST00000622565 VCYO14598 125 aa12.24□□□□□ -0.45
LTBP4-239ENST00000622565 CAMPP49913 170 aa12.24□□□□□ -0.45
LTBP4-239ENST00000622565 SUMO2P61956 95 aaKnown RBP12.24□□□□□ -0.45
LTBP4-239ENST00000622565 COX6A2Q02221 97 aa12.24□□□□□ -0.45
LTBP4-239ENST00000622565 ZNF664Q8N3J9 261 aa12.24□□□□□ -0.45
LTBP4-239ENST00000622565 PRSS3P2Q8NHM4 247 aa12.24□□□□□ -0.45
LTBP4-239ENST00000622565 LINC00526Q96FQ7 95 aa12.24□□□□□ -0.45
LTBP4-239ENST00000622565 SMDT1Q9H4I9 107 aa12.22□□□□□ -0.45
LTBP4-239ENST00000622565 UBE2D4Q9Y2X8 147 aa12.22□□□□□ -0.45
LTBP4-239ENST00000622565 FCER1GP30273 86 aa12.21□□□□□ -0.45
LTBP4-239ENST00000622565 RNASE13Q5GAN3 156 aaKnown RBP12.21□□□□□ -0.45
LTBP4-239ENST00000622565 DPH3Q96FX2 82 aa12.21□□□□□ -0.45
LTBP4-239ENST00000622565 OXTP01178 125 aa12.2□□□□□ -0.46
LTBP4-239ENST00000622565 MRPL54Q6P161 138 aaKnown RBP12.2□□□□□ -0.46
LTBP4-239ENST00000622565 PLAC8Q9NZF1 115 aa12.2□□□□□ -0.46
LTBP4-239ENST00000622565 A0A1B0GXF2 115 aa12.19□□□□□ -0.46
LTBP4-239ENST00000622565 PPP1R17O96001 155 aa12.19□□□□□ -0.46
LTBP4-239ENST00000622565 SS18Q15532 418 aa12.19□□□□□ -0.46
LTBP4-239ENST00000622565 CD164L2Q6UWJ8 174 aa12.19□□□□□ -0.46
LTBP4-239ENST00000622565 TRBV24-1A0A075B6N3 115 aa12.18□□□□□ -0.46
LTBP4-239ENST00000622565 IGHV1-58A0A0C4DH39 117 aa12.18□□□□□ -0.46
LTBP4-239ENST00000622565 IGKV2-24A0A0C4DH68 120 aa12.18□□□□□ -0.46
LTBP4-239ENST00000622565 CSDC2Q9Y534 153 aaKnown RBP12.18□□□□□ -0.46
LTBP4-239ENST00000622565 A0A096LNI7 61 aa12.17□□□□□ -0.46
LTBP4-239ENST00000622565 A0A1B0GW15 77 aa12.17□□□□□ -0.46
LTBP4-239ENST00000622565 LINC00862A6NCI5 91 aa12.17□□□□□ -0.46
LTBP4-239ENST00000622565 PPP1R2P9O14990 202 aa12.17□□□□□ -0.46
LTBP4-239ENST00000622565 TNFRSF6BO95407 300 aa12.17□□□□□ -0.46
LTBP4-239ENST00000622565 CKS2P33552 79 aa12.17□□□□□ -0.46
LTBP4-239ENST00000622565 Q6ZUT4 128 aa12.17□□□□□ -0.46
LTBP4-239ENST00000622565 FAM104AQ969W3 186 aa12.17□□□□□ -0.46
LTBP4-239ENST00000622565 KIR2DL4Q99706 377 aa12.17□□□□□ -0.46
LTBP4-239ENST00000622565 MAJINQ3KP22 176 aa12.16□□□□□ -0.46
LTBP4-239ENST00000622565 C20orf78Q9BR46 151 aa12.16□□□□□ -0.46
LTBP4-239ENST00000622565 D6R8Y8 96 aa12.15□□□□□ -0.46
LTBP4-239ENST00000622565 PHOX2AO14813 284 aa12.15□□□□□ -0.46
LTBP4-239ENST00000622565 NPYP01303 97 aa12.15□□□□□ -0.46
LTBP4-239ENST00000622565 RPL39P62891 51 aaKnown RBP12.15□□□□□ -0.46
LTBP4-239ENST00000622565 RPL32P62910 135 aaKnown RBP12.15□□□□□ -0.46
LTBP4-239ENST00000622565 HBBP68871 147 aa12.15□□□□□ -0.46
LTBP4-239ENST00000622565 TRAV13-1A0A0B4J241 112 aa12.13□□□□□ -0.47
LTBP4-239ENST00000622565 C1orf196B1AJZ1 125 aa12.13□□□□□ -0.47
LTBP4-239ENST00000622565 STPG4Q8N801 248 aa12.13□□□□□ -0.47
LTBP4-239ENST00000622565 CARD19Q96LW7 228 aa12.13□□□□□ -0.47
LTBP4-239ENST00000622565 TIMM21Q9BVV7 248 aa12.13□□□□□ -0.47
LTBP4-239ENST00000622565 SMIM2Q9BVW6 85 aa12.13□□□□□ -0.47
LTBP4-239ENST00000622565 OPRPNQ99935 248 aaPredicted RBP12.12□□□□□ -0.47
LTBP4-239ENST00000622565 HMCN2Q8NDA2 5059 aa12.12□□□□□ -0.47
LTBP4-239ENST00000622565 IGLV4-69A0A075B6H9 119 aa12.11□□□□□ -0.47
LTBP4-239ENST00000622565 ZNF561-AS1K7EIQ3 104 aa12.11□□□□□ -0.47
LTBP4-239ENST00000622565 TCAPO15273 167 aa12.11□□□□□ -0.47
LTBP4-239ENST00000622565 SYCNQ0VAF6 134 aa12.11□□□□□ -0.47
LTBP4-239ENST00000622565 F8W036 122 aa12.1□□□□□ -0.47
LTBP4-239ENST00000622565 COX7A2LO14548 114 aa12.1□□□□□ -0.47
LTBP4-239ENST00000622565 S100A8P05109 93 aa12.1□□□□□ -0.47
LTBP4-239ENST00000622565 C5orf38Q86SI9 138 aa12.1□□□□□ -0.47
LTBP4-239ENST00000622565 MT1HL1P0DM35 61 aa12.09□□□□□ -0.47
LTBP4-239ENST00000622565 SMAGPQ0VAQ4 97 aa12.09□□□□□ -0.47
LTBP4-239ENST00000622565 Q6ZRU5 148 aa12.09□□□□□ -0.47
LTBP4-239ENST00000622565 TMEM18Q96B42 140 aa12.09□□□□□ -0.47
LTBP4-239ENST00000622565 MALP21145 153 aa12.08□□□□□ -0.48
LTBP4-239ENST00000622565 ATP5L2Q7Z4Y8 100 aa12.08□□□□□ -0.48
LTBP4-239ENST00000622565 C7orf33Q8WU49 177 aa12.08□□□□□ -0.48
LTBP4-239ENST00000622565 PPBPP02775 128 aa12.07□□□□□ -0.48
LTBP4-239ENST00000622565 TMEM136Q6ZRR5 245 aa12.06□□□□□ -0.48
LTBP4-239ENST00000622565 ORMDL3Q8N138 153 aa12.06□□□□□ -0.48
LTBP4-239ENST00000622565 PRELID3AQ96N28 172 aa12.06□□□□□ -0.48
LTBP4-239ENST00000622565 PRR3P79522 188 aaKnown RBP12.05□□□□□ -0.48
LTBP4-239ENST00000622565 SPANXA1Q9NS26 97 aa12.05□□□□□ -0.48
LTBP4-239ENST00000622565 PTTG1IPP53801 180 aa12.04□□□□□ -0.48
LTBP4-239ENST00000622565 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
LTBP4-239ENST00000622565 SERTAD4-AS1Q5TG53 156 aa12.04□□□□□ -0.48
LTBP4-239ENST00000622565 CAMK2N2Q96S95 79 aa12.04□□□□□ -0.48
LTBP4-239ENST00000622565 LINC00474Q9P2X8 69 aa12.04□□□□□ -0.48
LTBP4-239ENST00000622565 IGHV3OR16-9A0A0B4J2B5 98 aa12.03□□□□□ -0.48
LTBP4-239ENST00000622565 PNRC1Q12796 327 aaPredicted RBP12.03□□□□□ -0.48
LTBP4-239ENST00000622565 GAGE2BQ13066 116 aa12.03□□□□□ -0.48
LTBP4-239ENST00000622565 C2orf48Q96LS8 159 aa12.03□□□□□ -0.48
LTBP4-239ENST00000622565 A0A0J9YXV3 536 aa12.02□□□□□ -0.49
LTBP4-239ENST00000622565 LOC107984640A0A0U1RRK4 108 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms