RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 UBE2L6O14933 153 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 ESRGQ1W209 222 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 LELP1Q5T871 98 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 Q6ZN92 141 aa12.28□□□□□ -0.44
PTCHD3-202ENST00000622555 HSBP1L1C9JCN9 74 aa12.27□□□□□ -0.45
PTCHD3-202ENST00000622555 ATP5LO75964 103 aa12.27□□□□□ -0.45
PTCHD3-202ENST00000622555 APLNQ9ULZ1 77 aa12.26□□□□□ -0.45
PTCHD3-202ENST00000622555 HNRNPA3P51991 378 aaKnown RBP12.25□□□□□ -0.45
PTCHD3-202ENST00000622555 GAGE6Q13070 117 aa12.25□□□□□ -0.45
PTCHD3-202ENST00000622555 SCGB3A1Q96QR1 104 aa12.25□□□□□ -0.45
PTCHD3-202ENST00000622555 LINC01549A6NIU2 74 aa12.25□□□□□ -0.45
PTCHD3-202ENST00000622555 ODF1Q14990 250 aa12.25□□□□□ -0.45
PTCHD3-202ENST00000622555 DNAH7Q8WXX0 4024 aa12.24□□□□□ -0.45
PTCHD3-202ENST00000622555 TRAV8-6A0A0B4J262 113 aa12.24□□□□□ -0.45
PTCHD3-202ENST00000622555 H7C423 109 aa12.24□□□□□ -0.45
PTCHD3-202ENST00000622555 FGF6P10767 208 aa12.23□□□□□ -0.45
PTCHD3-202ENST00000622555 CCL18P55774 89 aa12.23□□□□□ -0.45
PTCHD3-202ENST00000622555 AMMECR1LQ6DCA0 310 aa12.23□□□□□ -0.45
PTCHD3-202ENST00000622555 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
PTCHD3-202ENST00000622555 TMEM262E9PQX1 116 aa12.23□□□□□ -0.45
PTCHD3-202ENST00000622555 TCTAP57738 103 aa12.23□□□□□ -0.45
PTCHD3-202ENST00000622555 ERASQ7Z444 233 aa12.23□□□□□ -0.45
PTCHD3-202ENST00000622555 COX8AP10176 69 aa12.22□□□□□ -0.45
PTCHD3-202ENST00000622555 SMAGPQ0VAQ4 97 aa12.22□□□□□ -0.45
PTCHD3-202ENST00000622555 SLC25A34Q6PIV7 304 aa12.22□□□□□ -0.45
PTCHD3-202ENST00000622555 SPANXA1Q9NS26 97 aa12.22□□□□□ -0.45
PTCHD3-202ENST00000622555 IGIPA6NJ69 53 aa12.21□□□□□ -0.45
PTCHD3-202ENST00000622555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.21□□□□□ -0.45
PTCHD3-202ENST00000622555 ANKRD39Q53RE8 183 aa12.21□□□□□ -0.45
PTCHD3-202ENST00000622555 DGAT2L7PQ6IED9 249 aa12.21□□□□□ -0.45
PTCHD3-202ENST00000622555 TIMM17AQ99595 171 aa12.21□□□□□ -0.45
PTCHD3-202ENST00000622555 TIMM21Q9BVV7 248 aa12.21□□□□□ -0.45
PTCHD3-202ENST00000622555 PYGO1Q9Y3Y4 419 aa12.21□□□□□ -0.45
PTCHD3-202ENST00000622555 LINC00588Q9Y4M8 146 aa12.21□□□□□ -0.45
PTCHD3-202ENST00000622555 CSMD3Q7Z407 3707 aa12.21□□□□□ -0.45
PTCHD3-202ENST00000622555 TRAV12-1A0A0B4J245 112 aa12.2□□□□□ -0.46
PTCHD3-202ENST00000622555 A0A1B0GV90 55 aa12.2□□□□□ -0.46
PTCHD3-202ENST00000622555 PRSS1P07477 247 aa12.2□□□□□ -0.46
PTCHD3-202ENST00000622555 TMEM141Q96I45 108 aa12.2□□□□□ -0.46
PTCHD3-202ENST00000622555 WFDC10BQ8IUB3 73 aa12.2□□□□□ -0.46
PTCHD3-202ENST00000622555 TMEM101Q96IK0 257 aa12.2□□□□□ -0.46
PTCHD3-202ENST00000622555 OPRPNQ99935 248 aaPredicted RBP12.2□□□□□ -0.46
PTCHD3-202ENST00000622555 ZNF25P17030 456 aaPredicted RBP12.19□□□□□ -0.46
PTCHD3-202ENST00000622555 MPV17L2Q567V2 206 aa12.19□□□□□ -0.46
PTCHD3-202ENST00000622555 OR5A1Q8NGJ0 315 aa12.19□□□□□ -0.46
PTCHD3-202ENST00000622555 A0A087WX48 190 aa12.18□□□□□ -0.46
PTCHD3-202ENST00000622555 STPG4Q8N801 248 aa12.18□□□□□ -0.46
PTCHD3-202ENST00000622555 CSDC2Q9Y534 153 aaKnown RBP12.18□□□□□ -0.46
PTCHD3-202ENST00000622555 DYNC2H1Q8NCM8 4307 aaKnown RBP12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 IGLV4-3A0A075B6K6 122 aa12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 RBX1P62877 108 aa12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 Q6ZUT4 128 aa12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 UBE2DNLQ8IWF7 75 aa12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 IGLV4-60A0A075B6I1 120 aa12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 DLEU1O43261 78 aa12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 DPM2O94777 84 aa12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 IGKCP01834 107 aa12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 RNASE13Q5GAN3 156 aaKnown RBP12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 Q8N3U1 123 aa12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 TP73-AS1Q9UF72 201 aa12.17□□□□□ -0.46
PTCHD3-202ENST00000622555 A0A1B0GUV1 79 aa12.16□□□□□ -0.46
PTCHD3-202ENST00000622555 NPSP0C0P6 89 aa12.16□□□□□ -0.46
PTCHD3-202ENST00000622555 MRPS36P82909 103 aaKnown RBP12.16□□□□□ -0.46
PTCHD3-202ENST00000622555 PAPPA-AS1Q5QFB9 102 aa12.16□□□□□ -0.46
PTCHD3-202ENST00000622555 BOD1L2Q8IYS8 172 aa12.16□□□□□ -0.46
PTCHD3-202ENST00000622555 BAALCQ8WXS3 180 aa12.16□□□□□ -0.46
PTCHD3-202ENST00000622555 FAM104AQ969W3 186 aa12.16□□□□□ -0.46
PTCHD3-202ENST00000622555 TENM2Q9NT68 2774 aa12.16□□□□□ -0.46
PTCHD3-202ENST00000622555 CDC42SE2Q9NRR3 84 aa12.15□□□□□ -0.46
PTCHD3-202ENST00000622555 MRPL35Q9NZE8 188 aaKnown RBP12.15□□□□□ -0.46
PTCHD3-202ENST00000622555 STARD9Q9P2P6 4700 aa12.15□□□□□ -0.46
PTCHD3-202ENST00000622555 C3orf84H3BNL1 204 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 IGHV3-33P01772 117 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 IGHV3-30-3P0DP02 117 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 COL5A1-AS1Q5SY13 56 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 CASC10Q5T4H9 136 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 ZC2HC1BQ5TFG8 222 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 C2orf91Q6ZV80 131 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 UPK3BQ9BT76 320 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 VCX2Q9H322 139 aa12.14□□□□□ -0.47
PTCHD3-202ENST00000622555 SIVA1O15304 175 aa12.13□□□□□ -0.47
PTCHD3-202ENST00000622555 PMVKQ15126 192 aa12.13□□□□□ -0.47
PTCHD3-202ENST00000622555 F8VRH5 84 aa12.12□□□□□ -0.47
PTCHD3-202ENST00000622555 ANGP03950 147 aaKnown RBP12.12□□□□□ -0.47
PTCHD3-202ENST00000622555 AMELXQ99217 191 aa12.12□□□□□ -0.47
PTCHD3-202ENST00000622555 PLNP26678 52 aa12.11□□□□□ -0.47
PTCHD3-202ENST00000622555 HINT1P49773 126 aaPredicted RBP12.11□□□□□ -0.47
PTCHD3-202ENST00000622555 BATFQ16520 125 aa12.11□□□□□ -0.47
PTCHD3-202ENST00000622555 LINC01556Q5JQF7 62 aa12.11□□□□□ -0.47
PTCHD3-202ENST00000622555 CST9LQ9H4G1 147 aa12.11□□□□□ -0.47
PTCHD3-202ENST00000622555 PRSS29PA6NIE9 313 aa12.11□□□□□ -0.47
PTCHD3-202ENST00000622555 DNAH10OSP0CZ25 163 aa12.11□□□□□ -0.47
PTCHD3-202ENST00000622555 IGKV3OR2-268A0A0C4DH90 116 aa12.1□□□□□ -0.47
PTCHD3-202ENST00000622555 Q9H8V8 135 aa12.1□□□□□ -0.47
PTCHD3-202ENST00000622555 KLK12Q9UKR0 248 aa12.1□□□□□ -0.47
PTCHD3-202ENST00000622555 CHTOPQ9Y3Y2 248 aaKnown RBP12.1□□□□□ -0.47
PTCHD3-202ENST00000622555 IGKV2D-26A0A0A0MRZ7 120 aa12.09□□□□□ -0.47
PTCHD3-202ENST00000622555 CLPSL2Q6UWE3 100 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms