RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 RPL36AP83881 106 aaKnown RBP6.83□□□□□ -1.32
GGA3-222ENST00000621217 CFAP126Q5VTH2 177 aa6.83□□□□□ -1.32
GGA3-222ENST00000621217 RPL36ALQ969Q0 106 aaKnown RBP6.83□□□□□ -1.32
GGA3-222ENST00000621217 SETXQ7Z333 2677 aaKnown RBP6.83□□□□□ -1.32
GGA3-222ENST00000621217 IGKV2D-26A0A0A0MRZ7 120 aa6.83□□□□□ -1.32
GGA3-222ENST00000621217 C6orf226Q5I0X4 101 aa6.83□□□□□ -1.32
GGA3-222ENST00000621217 OPRPNQ99935 248 aaPredicted RBP6.83□□□□□ -1.32
GGA3-222ENST00000621217 MUC4Q99102 2169 aa6.83□□□□□ -1.32
GGA3-222ENST00000621217 TEX49A0A1B0GTD5 131 aa6.83□□□□□ -1.32
GGA3-222ENST00000621217 C9orf47Q6ZRZ4 202 aa6.83□□□□□ -1.32
GGA3-222ENST00000621217 TRAV4A0A0B4J268 109 aa6.82□□□□□ -1.32
GGA3-222ENST00000621217 RBAKDNA6NC62 111 aa6.82□□□□□ -1.32
GGA3-222ENST00000621217 RNF185Q96GF1 192 aa6.82□□□□□ -1.32
GGA3-222ENST00000621217 IGHV1OR15-1A0A075B7D0 117 aa6.82□□□□□ -1.32
GGA3-222ENST00000621217 RHOHQ15669 191 aa6.82□□□□□ -1.32
GGA3-222ENST00000621217 BRK1Q8WUW1 75 aa6.82□□□□□ -1.32
GGA3-222ENST00000621217 F5H768 121 aa6.82□□□□□ -1.32
GGA3-222ENST00000621217 LRRC75A-AS1Q8N1F1 130 aa6.82□□□□□ -1.32
GGA3-222ENST00000621217 CSMD1Q96PZ7 3565 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 LGALS9O00182 355 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 Q6YL49 198 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 BAALCQ8WXS3 180 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 NF1P21359 2839 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 hADV29S1A0JD25 119 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 C11orf86A6NJI1 115 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 MALP21145 153 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 Q6Q795 121 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 V9GYY9 64 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 TRGV4A0A0C4DH28 118 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 SUMO4Q6EEV6 95 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 Q6ZSV7 163 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 IMUPQ9GZP8 106 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 PKIGQ9Y2B9 76 aa6.81□□□□□ -1.32
GGA3-222ENST00000621217 SMIM9A6NGZ8 99 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 TOMM6Q96B49 74 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 PSMB8P28062 276 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 SHISA2Q6UWI4 295 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 MAPKAPK5-AS1Q8N8E1 139 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 CLEC2BQ92478 149 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 NBEAL1Q6ZS30 2694 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 A0A0J9YXV3 536 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 P0DMU3 169 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 FAM231AP0DMU4 169 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 FAM231CP0DMU5 169 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 ZFAND2AQ8N6M9 145 aa6.8□□□□□ -1.32
GGA3-222ENST00000621217 HRNRQ86YZ3 2850 aaPredicted RBP6.8□□□□□ -1.32
GGA3-222ENST00000621217 H3BUA1 57 aa6.79□□□□□ -1.32
GGA3-222ENST00000621217 MRPL53Q96EL3 112 aaKnown RBP6.79□□□□□ -1.32
GGA3-222ENST00000621217 LENEPQ9Y5L5 61 aa6.79□□□□□ -1.32
GGA3-222ENST00000621217 A0A096LPF7 62 aa6.79□□□□□ -1.32
GGA3-222ENST00000621217 H0YGX0 51 aa6.79□□□□□ -1.32
GGA3-222ENST00000621217 ESM1Q9NQ30 184 aa6.79□□□□□ -1.32
GGA3-222ENST00000621217 STAB1Q9NY15 2570 aa6.79□□□□□ -1.32
GGA3-222ENST00000621217 DEFB4AO15263 64 aa6.79□□□□□ -1.32
GGA3-222ENST00000621217 INSP01308 110 aa6.79□□□□□ -1.32
GGA3-222ENST00000621217 CEMP1Q6PRD7 247 aaPredicted RBP6.79□□□□□ -1.32
GGA3-222ENST00000621217 ORMDL1Q9P0S3 153 aa6.79□□□□□ -1.32
GGA3-222ENST00000621217 COL6A5A8TX70 2615 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 A0A096LNJ9 63 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 DEFB121Q5J5C9 76 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 TIMM17AQ99595 171 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 Q9H8V8 135 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 U3KQK5 164 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 NOTCH1P46531 2555 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 CRLF1O75462 422 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 SVEP1Q4LDE5 3571 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 PFN2P35080 140 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 GPHB5Q86YW7 130 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 DSCR8Q96T75 97 aa6.78□□□□□ -1.32
GGA3-222ENST00000621217 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.77□□□□□ -1.33
GGA3-222ENST00000621217 IGKV2-29A2NJV5 120 aaPredicted RBP6.77□□□□□ -1.33
GGA3-222ENST00000621217 LINC00694P0DN24 101 aa6.77□□□□□ -1.33
GGA3-222ENST00000621217 SLC25A29Q8N8R3 303 aa6.77□□□□□ -1.33
GGA3-222ENST00000621217 WFDC10AQ9H1F0 79 aa6.77□□□□□ -1.33
GGA3-222ENST00000621217 LY6G6DO95868 133 aa6.77□□□□□ -1.33
GGA3-222ENST00000621217 ZNF702PQ9H963 129 aa6.77□□□□□ -1.33
GGA3-222ENST00000621217 COX7CP15954 63 aa6.76□□□□□ -1.33
GGA3-222ENST00000621217 NBEAL2Q6ZNJ1 2754 aa6.76□□□□□ -1.33
GGA3-222ENST00000621217 FAM236DA0A1B0GTK5 79 aa6.76□□□□□ -1.33
GGA3-222ENST00000621217 FAM236CP0DP71 79 aa6.76□□□□□ -1.33
GGA3-222ENST00000621217 PROK1P58294 105 aa6.76□□□□□ -1.33
GGA3-222ENST00000621217 C20orf197Q8N268 126 aa6.76□□□□□ -1.33
GGA3-222ENST00000621217 ZNRF2Q8NHG8 242 aa6.76□□□□□ -1.33
GGA3-222ENST00000621217 A0A0J9YY99 117 aa6.76□□□□□ -1.33
GGA3-222ENST00000621217 NOP10Q9NPE3 64 aaKnown RBP6.76□□□□□ -1.33
GGA3-222ENST00000621217 IGHV3-33P01772 117 aa6.76□□□□□ -1.33
GGA3-222ENST00000621217 A0A0J9YX75 114 aa6.75□□□□□ -1.33
GGA3-222ENST00000621217 RNASE3P12724 160 aaKnown RBP6.75□□□□□ -1.33
GGA3-222ENST00000621217 LINC01006Q8NI28 216 aa6.75□□□□□ -1.33
GGA3-222ENST00000621217 FBN2P35556 2912 aa6.75□□□□□ -1.33
GGA3-222ENST00000621217 NRACQ8N912 160 aa6.74□□□□□ -1.33
GGA3-222ENST00000621217 CELSR1Q9NYQ6 3014 aa6.74□□□□□ -1.33
GGA3-222ENST00000621217 A0A0U1RQV1 116 aa6.74□□□□□ -1.33
GGA3-222ENST00000621217 U3KQE9 123 aa6.74□□□□□ -1.33
GGA3-222ENST00000621217 TRBV7-3A0A075B6L6 115 aa6.74□□□□□ -1.33
GGA3-222ENST00000621217 TRBV30A0A0K0K1B3 111 aa6.74□□□□□ -1.33
GGA3-222ENST00000621217 SERP2Q8N6R1 65 aa6.74□□□□□ -1.33
GGA3-222ENST00000621217 JMJD7-PLA2G4BH0Y9G9 81 aa6.73□□□□□ -1.33
GGA3-222ENST00000621217 NEXN-AS1Q8NBZ9 246 aa6.73□□□□□ -1.33
GGA3-222ENST00000621217 K7EMT4 169 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms