RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 NUPR1O60356 82 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST1H2BKO60814 126 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST1H2BJP06899 126 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST1H2BOP23527 126 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST1H2BBP33778 126 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST1H2BDP58876 126 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST1H2BCP62807 126 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 REG3AQ06141 175 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST2H2BEQ16778 126 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.1□□□□□ -0.95
NEK3-210ENST00000620675 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 OR5A1Q8NGJ0 315 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST1H2BHQ93079 126 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST1H2BNQ99877 126 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 HIST1H2BMQ99879 126 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 AP5S1Q9NUS5 200 aa9.1□□□□□ -0.95
NEK3-210ENST00000620675 K7EP13 123 aa9.09□□□□□ -0.95
NEK3-210ENST00000620675 PKIAP61925 76 aa9.09□□□□□ -0.95
NEK3-210ENST00000620675 ZNF25P17030 456 aaPredicted RBP9.09□□□□□ -0.95
NEK3-210ENST00000620675 ZNF664Q8N3J9 261 aa9.09□□□□□ -0.95
NEK3-210ENST00000620675 CYSLTR1Q9Y271 337 aa9.09□□□□□ -0.95
NEK3-210ENST00000620675 EPPK1P58107 5090 aaKnown RBP9.08□□□□□ -0.96
NEK3-210ENST00000620675 K7EMI3 77 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 Q0VG73 95 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 DGAT2L7PQ6IED9 249 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 BAGE3Q86Y29 109 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 DNAH5Q8TE73 4624 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 IGLV4-3A0A075B6K6 122 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 IGKV2D-24A0A075B6R9 120 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 IGIPA6NJ69 53 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 SERF1AO75920 110 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 CRPP02741 224 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 TNP2Q05952 138 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 KRTAP26-1Q6PEX3 210 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 TOMM6Q96B49 74 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 TIMM21Q9BVV7 248 aa9.08□□□□□ -0.96
NEK3-210ENST00000620675 CSDC2Q9Y534 153 aaKnown RBP9.08□□□□□ -0.96
NEK3-210ENST00000620675 TRAV8-3A0A0A6YYJ7 113 aa9.07□□□□□ -0.96
NEK3-210ENST00000620675 FAM19A2Q8N3H0 131 aa9.07□□□□□ -0.96
NEK3-210ENST00000620675 WFDC2Q14508 124 aa9.06□□□□□ -0.96
NEK3-210ENST00000620675 SPANXA1Q9NS26 97 aa9.06□□□□□ -0.96
NEK3-210ENST00000620675 LINC00173Q6ZV60 143 aa9.06□□□□□ -0.96
NEK3-210ENST00000620675 PYGO1Q9Y3Y4 419 aa9.06□□□□□ -0.96
NEK3-210ENST00000620675 MIAQ16674 131 aa9.05□□□□□ -0.96
NEK3-210ENST00000620675 LINC00959A0A1B0GUT2 108 aa9.04□□□□□ -0.96
NEK3-210ENST00000620675 LECT2O14960 151 aa9.04□□□□□ -0.96
NEK3-210ENST00000620675 SCGB3A1Q96QR1 104 aa9.04□□□□□ -0.96
NEK3-210ENST00000620675 TRAV13-1A0A0B4J241 112 aa9.04□□□□□ -0.96
NEK3-210ENST00000620675 RAB5BP61020 215 aa9.04□□□□□ -0.96
NEK3-210ENST00000620675 MRPS36P82909 103 aaKnown RBP9.04□□□□□ -0.96
NEK3-210ENST00000620675 CHCHD1Q96BP2 118 aaKnown RBP9.04□□□□□ -0.96
NEK3-210ENST00000620675 C1orf43Q9BWL3 253 aa9.04□□□□□ -0.96
NEK3-210ENST00000620675 HBDP02042 147 aa9.03□□□□□ -0.96
NEK3-210ENST00000620675 FUSP35637 526 aaKnown RBP eCLIP9.03□□□□□ -0.96
NEK3-210ENST00000620675 NFE4Q86UQ8 179 aa9.03□□□□□ -0.96
NEK3-210ENST00000620675 PRSS29PA6NIE9 313 aa9.03□□□□□ -0.96
NEK3-210ENST00000620675 XCL1P47992 114 aa9.03□□□□□ -0.96
NEK3-210ENST00000620675 ERASQ7Z444 233 aa9.03□□□□□ -0.96
NEK3-210ENST00000620675 BAALCQ8WXS3 180 aa9.03□□□□□ -0.96
NEK3-210ENST00000620675 CHCHD10Q8WYQ3 142 aaPredicted RBP9.03□□□□□ -0.96
NEK3-210ENST00000620675 TMEM141Q96I45 108 aa9.03□□□□□ -0.96
NEK3-210ENST00000620675 LRCOL1A6NCL2 159 aa9.02□□□□□ -0.97
NEK3-210ENST00000620675 C1orf196B1AJZ1 125 aa9.02□□□□□ -0.97
NEK3-210ENST00000620675 CCL25O15444 150 aa9.02□□□□□ -0.97
NEK3-210ENST00000620675 PSCAO43653 123 aa9.02□□□□□ -0.97
NEK3-210ENST00000620675 PDZD11Q5EBL8 140 aa9.02□□□□□ -0.97
NEK3-210ENST00000620675 TIMM17AQ99595 171 aa9.02□□□□□ -0.97
NEK3-210ENST00000620675 HSBP1O75506 76 aa9.01□□□□□ -0.97
NEK3-210ENST00000620675 AMELXQ99217 191 aa9.01□□□□□ -0.97
NEK3-210ENST00000620675 GAGE12HA6NDE8 117 aa9.01□□□□□ -0.97
NEK3-210ENST00000620675 IFITM10A6NMD0 228 aa9.01□□□□□ -0.97
NEK3-210ENST00000620675 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
NEK3-210ENST00000620675 TRAV8-4A0A0B4J246 113 aa9□□□□□ -0.97
NEK3-210ENST00000620675 NDUFA6P56556 154 aa9□□□□□ -0.97
NEK3-210ENST00000620675 FOXI1Q12951 378 aa9□□□□□ -0.97
NEK3-210ENST00000620675 TM2D2Q9BX73 214 aa9□□□□□ -0.97
NEK3-210ENST00000620675 A0A087WTM6 91 aa8.99□□□□□ -0.97
NEK3-210ENST00000620675 G0S2P27469 103 aa8.99□□□□□ -0.97
NEK3-210ENST00000620675 COX6A2Q02221 97 aa8.99□□□□□ -0.97
NEK3-210ENST00000620675 TEX43Q6ZNM6 134 aa8.99□□□□□ -0.97
NEK3-210ENST00000620675 RMI2Q96E14 147 aa8.99□□□□□ -0.97
NEK3-210ENST00000620675 VCX2Q9H322 139 aa8.99□□□□□ -0.97
NEK3-210ENST00000620675 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
NEK3-210ENST00000620675 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
NEK3-210ENST00000620675 UBE2D1P51668 147 aa8.98□□□□□ -0.97
NEK3-210ENST00000620675 SS18Q15532 418 aa8.98□□□□□ -0.97
NEK3-210ENST00000620675 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.98□□□□□ -0.97
NEK3-210ENST00000620675 LINC00242Q5T6M2 205 aa8.98□□□□□ -0.97
NEK3-210ENST00000620675 Q6ZN92 141 aa8.98□□□□□ -0.97
NEK3-210ENST00000620675 LRP1BQ9NZR2 4599 aa8.97□□□□□ -0.97
NEK3-210ENST00000620675 FABP4P15090 132 aa8.97□□□□□ -0.97
NEK3-210ENST00000620675 KRTAP10-2P60368 255 aa8.97□□□□□ -0.97
NEK3-210ENST00000620675 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
NEK3-210ENST00000620675 COA6Q5JTJ3 125 aaKnown RBP8.96□□□□□ -0.97
NEK3-210ENST00000620675 C5orf38Q86SI9 138 aa8.96□□□□□ -0.97
NEK3-210ENST00000620675 CST9LQ9H4G1 147 aa8.96□□□□□ -0.97
NEK3-210ENST00000620675 COX11Q9Y6N1 276 aa8.96□□□□□ -0.97
NEK3-210ENST00000620675 A0A0J9YXV3 536 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms