RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 CELA1Q9UNI1 258 aa8.97□□□□□ -0.97
TNFAIP3-209ENST00000619035 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.97
TNFAIP3-209ENST00000619035 A0A0J9YXV3 536 aa8.96□□□□□ -0.97
TNFAIP3-209ENST00000619035 MYMXA0A1B0GTQ4 84 aa8.96□□□□□ -0.97
TNFAIP3-209ENST00000619035 PRB2P02812 416 aaPredicted RBP8.96□□□□□ -0.97
TNFAIP3-209ENST00000619035 DAD1P61803 113 aa8.96□□□□□ -0.97
TNFAIP3-209ENST00000619035 MDFIQ99750 246 aa8.96□□□□□ -0.97
TNFAIP3-209ENST00000619035 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.98
TNFAIP3-209ENST00000619035 SEC11AP67812 179 aa8.96□□□□□ -0.98
TNFAIP3-209ENST00000619035 PLEKHB2Q96CS7 222 aa8.96□□□□□ -0.98
TNFAIP3-209ENST00000619035 VCX2Q9H322 139 aa8.96□□□□□ -0.98
TNFAIP3-209ENST00000619035 HIGD1BQ9P298 99 aa8.96□□□□□ -0.98
TNFAIP3-209ENST00000619035 ANK2Q01484 3957 aa8.95□□□□□ -0.98
TNFAIP3-209ENST00000619035 VAMP3Q15836 100 aa8.95□□□□□ -0.98
TNFAIP3-209ENST00000619035 TEX48A0A1B0GUV7 120 aa8.94□□□□□ -0.98
TNFAIP3-209ENST00000619035 ZNF815PA8K554 130 aa8.94□□□□□ -0.98
TNFAIP3-209ENST00000619035 K7ERJ3 54 aa8.94□□□□□ -0.98
TNFAIP3-209ENST00000619035 CCL25O15444 150 aa8.94□□□□□ -0.98
TNFAIP3-209ENST00000619035 NTM-AS1Q6ZSK4 140 aa8.94□□□□□ -0.98
TNFAIP3-209ENST00000619035 UBE2D4Q9Y2X8 147 aa8.94□□□□□ -0.98
TNFAIP3-209ENST00000619035 SPART-AS1P0CW21 52 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 AMMECR1LQ6DCA0 310 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 Q6ZUT4 128 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 PYGO1Q9Y3Y4 419 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 NOTCH1P46531 2555 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 GYPEP15421 78 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 HTN3P15516 51 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 PAPPA-AS1Q5QFB9 102 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 CEND1Q8N111 149 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 HIST1H4GQ99525 98 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 SPANXA1Q9NS26 97 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 PRO0255Q9UI72 69 aa8.93□□□□□ -0.98
TNFAIP3-209ENST00000619035 A6NDN8 102 aa8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 ZNF22P17026 224 aaPredicted RBP8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 CRYBA4P53673 196 aa8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 PTTG1IPP53801 180 aa8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 KPRPQ5T749 579 aaPredicted RBP8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 NFE4Q86UQ8 179 aa8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 A0A0J9YY99 117 aa8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 LINC00694P0DN24 101 aa8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 HERVK_113P61574 105 aa8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 DGAT2L7PQ6IED9 249 aa8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 AMELXQ99217 191 aa8.92□□□□□ -0.98
TNFAIP3-209ENST00000619035 PAX4O43316 350 aa8.91□□□□□ -0.98
TNFAIP3-209ENST00000619035 SCGB1D4Q6XE38 83 aa8.91□□□□□ -0.98
TNFAIP3-209ENST00000619035 NHP2Q9NX24 153 aaKnown RBP8.91□□□□□ -0.98
TNFAIP3-209ENST00000619035 A0A096LPF7 62 aa8.91□□□□□ -0.98
TNFAIP3-209ENST00000619035 H3BUT2 72 aa8.91□□□□□ -0.98
TNFAIP3-209ENST00000619035 ATP5G1P05496 136 aa8.91□□□□□ -0.98
TNFAIP3-209ENST00000619035 UBE2V1Q13404 147 aa8.91□□□□□ -0.98
TNFAIP3-209ENST00000619035 GTSF1LQ9H1H1 148 aa8.91□□□□□ -0.98
TNFAIP3-209ENST00000619035 TMEM223A0PJW6 202 aa8.9□□□□□ -0.98
TNFAIP3-209ENST00000619035 F5H768 121 aa8.9□□□□□ -0.98
TNFAIP3-209ENST00000619035 H3BRM9 83 aa8.9□□□□□ -0.98
TNFAIP3-209ENST00000619035 UBE2L6O14933 153 aa8.9□□□□□ -0.98
TNFAIP3-209ENST00000619035 TMEM243Q9BU79 118 aa8.9□□□□□ -0.98
TNFAIP3-209ENST00000619035 TM2D2Q9BX73 214 aa8.89□□□□□ -0.99
TNFAIP3-209ENST00000619035 DNAH3Q8TD57 4116 aa8.89□□□□□ -0.99
TNFAIP3-209ENST00000619035 J3QQQ9 107 aa8.89□□□□□ -0.99
TNFAIP3-209ENST00000619035 SMAGPQ0VAQ4 97 aa8.89□□□□□ -0.99
TNFAIP3-209ENST00000619035 ATP6V0E2Q8NHE4 81 aa8.89□□□□□ -0.99
TNFAIP3-209ENST00000619035 TRAV26-1A0A087WT03 109 aa8.88□□□□□ -0.99
TNFAIP3-209ENST00000619035 TRAV8-3A0A0A6YYJ7 113 aa8.88□□□□□ -0.99
TNFAIP3-209ENST00000619035 C9orf118A6NHY6 69 aa8.88□□□□□ -0.99
TNFAIP3-209ENST00000619035 SMIM13P0DJ93 91 aa8.88□□□□□ -0.99
TNFAIP3-209ENST00000619035 DEFB121Q5J5C9 76 aa8.88□□□□□ -0.99
TNFAIP3-209ENST00000619035 C11orf68Q9H3H3 251 aaKnown RBP8.88□□□□□ -0.99
TNFAIP3-209ENST00000619035 TRBV6-8A0A0A6YYG3 113 aa8.88□□□□□ -0.99
TNFAIP3-209ENST00000619035 SBSPONQ8IVN8 264 aa8.88□□□□□ -0.99
TNFAIP3-209ENST00000619035 VSIG2Q96IQ7 327 aa8.88□□□□□ -0.99
TNFAIP3-209ENST00000619035 TIMM21Q9BVV7 248 aa8.88□□□□□ -0.99
TNFAIP3-209ENST00000619035 LGALS3P17931 250 aaKnown RBP8.87□□□□□ -0.99
TNFAIP3-209ENST00000619035 MRPS36P82909 103 aaKnown RBP8.87□□□□□ -0.99
TNFAIP3-209ENST00000619035 GAGE6Q13070 117 aa8.87□□□□□ -0.99
TNFAIP3-209ENST00000619035 MRAPQ8TCY5 172 aa8.87□□□□□ -0.99
TNFAIP3-209ENST00000619035 CHCHD5Q9BSY4 110 aa8.87□□□□□ -0.99
TNFAIP3-209ENST00000619035 NBEAL1Q6ZS30 2694 aa8.87□□□□□ -0.99
TNFAIP3-209ENST00000619035 OR5A1Q8NGJ0 315 aa8.87□□□□□ -0.99
TNFAIP3-209ENST00000619035 H7C423 109 aa8.86□□□□□ -0.99
TNFAIP3-209ENST00000619035 K7EIL1 84 aa8.86□□□□□ -0.99
TNFAIP3-209ENST00000619035 SRSF9Q13242 221 aaKnown RBP eCLIP8.86□□□□□ -0.99
TNFAIP3-209ENST00000619035 LEPROTO15243 131 aa8.85□□□□□ -0.99
TNFAIP3-209ENST00000619035 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
TNFAIP3-209ENST00000619035 TAL2Q16559 108 aa8.85□□□□□ -0.99
TNFAIP3-209ENST00000619035 C12orf74Q32Q52 190 aa8.85□□□□□ -0.99
TNFAIP3-209ENST00000619035 TMEM101Q96IK0 257 aa8.85□□□□□ -0.99
TNFAIP3-209ENST00000619035 CSDC2Q9Y534 153 aaKnown RBP8.85□□□□□ -0.99
TNFAIP3-209ENST00000619035 MGAM2Q2M2H8 2515 aa8.85□□□□□ -0.99
TNFAIP3-209ENST00000619035 A0A0J9YWU9 116 aa8.85□□□□□ -0.99
TNFAIP3-209ENST00000619035 UBE2D1P51668 147 aa8.85□□□□□ -0.99
TNFAIP3-209ENST00000619035 COX6A2Q02221 97 aa8.85□□□□□ -0.99
TNFAIP3-209ENST00000619035 IGHV3-30-3P0DP02 117 aa8.84□□□□□ -0.99
TNFAIP3-209ENST00000619035 TRAV13-1A0A0B4J241 112 aa8.84□□□□□ -0.99
TNFAIP3-209ENST00000619035 SPATA25Q9BR10 227 aa8.84□□□□□ -0.99
TNFAIP3-209ENST00000619035 TINCRA0A1B0GVN0 87 aa8.83□□□□□ -1
TNFAIP3-209ENST00000619035 GEMIN7Q9H840 131 aaKnown RBP8.83□□□□□ -1
TNFAIP3-209ENST00000619035 CDC42SE2Q9NRR3 84 aa8.83□□□□□ -1
TNFAIP3-209ENST00000619035 CDKN2A-AS1Q9UH64 79 aa8.83□□□□□ -1
TNFAIP3-209ENST00000619035 A0A1W2PPM0 123 aa8.83□□□□□ -1
TNFAIP3-209ENST00000619035 GAGE10A6NGK3 116 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms