RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CLIP1P30622 1438 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 CASKIN1Q8WXD9 1431 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 NSD3Q9BZ95 1437 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 TOPAZ1Q8N9V7 1692 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 GOLGB1Q14789 3259 aaKnown RBP1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 SSSCA1O60232 199 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 IGLC1P0CG04 106 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 SPTBP11277 2137 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 IL9P15248 144 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 GNG11P61952 73 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 MPV17LQ2QL34 196 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 FAM213BQ8TBF2 198 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 PMCHL2Q9BQD1 86 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 TMEM14CQ9P0S9 112 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 NRXN2Q9P2S2 1712 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 COL6A6A6NMZ7 2263 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 DUOX2Q9NRD8 1548 aa1.14□□□□□ -2.23
SCAMP1-205ENST00000614488 DLEC1Q9Y238 1755 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 C1orf167Q5SNV9 1468 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 CCDC18Q5T9S5 1454 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 AFDNP55196 1824 aaKnown RBP1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 ARFGEF3Q5TH69 2177 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 PKD1L3Q7Z443 1732 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 TEX49A0A1B0GTD5 131 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 LOC101927531A0A1B0GV80 90 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 H3BQ15 152 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 IGHV3-30P01768 117 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 IGHV3-30-5P0DP03 117 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 LYNX1P0DP58 116 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 PDE6GP18545 87 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 CCL8P80075 99 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 PYY3Q5JQD4 70 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 MYOZ3Q8TDC0 251 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 NPVFQ9HCQ7 196 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 PHRF1Q9P1Y6 1649 aaKnown RBP1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 PPIP5K1Q6PFW1 1433 aa1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 INTS1Q8N201 2190 aaKnown RBP1.13□□□□□ -2.23
SCAMP1-205ENST00000614488 ATP7BP35670 1465 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 ANKRD36BQ8N2N9 1353 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 PLXNA1Q9UIW2 1896 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 TRGV2A0A075B6R0 118 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 SIX6O95475 246 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 UBE2D1P51668 147 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 RPL37AP61513 92 aaKnown RBP1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 SEC11AP67812 179 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 Q0VG73 95 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 C10orf128Q5T292 105 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 LINC00322Q6ZN03 302 aaPredicted RBP1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 CYP2G1PQ6ZSU1 146 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 NDUFA11Q86Y39 141 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 DLG5Q8TDM6 1919 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 ALS2Q96Q42 1657 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 LY75O60449 1722 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 MON2Q7Z3U7 1717 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 TET1Q8NFU7 2136 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 NRXN1Q9ULB1 1477 aa1.12□□□□□ -2.23
SCAMP1-205ENST00000614488 DOCK11Q5JSL3 2073 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 NHSQ6T4R5 1651 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 GCC2Q8IWJ2 1684 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 LMO7Q8WWI1 1683 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 CRYM-AS1A6NIL9 109 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 HIGD1CA8MV81 97 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 INE1O15225 51 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 HCRTO43612 131 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 FAUP35544 74 aaKnown RBP1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 FXYD4P59646 89 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 SPATA45Q537H7 98 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 C20orf197Q8N268 126 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 AMELYQ99218 206 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 CYP4F30PQ9H0H9 118 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 SNURFQ9Y675 71 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 CCDC141Q6ZP82 1450 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 LOC285556D6RIA3 1793 aa1.11□□□□□ -2.23
SCAMP1-205ENST00000614488 COL6A3P12111 3177 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 MED12Q93074 2177 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 FMN2Q9NZ56 1722 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 KIAA0100Q14667 2235 aaKnown RBP1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 IGLV3-32A0A0A0MS00 114 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 TRBV6-7A0A0A0MS04 114 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 NAP1L6A6NFF2 107 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 M0R2N4 97 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 MRPS14O60783 128 aaKnown RBP1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 KRTDAPP60985 99 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 SFTA2Q6UW10 78 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 ZNF818PQ6ZRF7 136 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 MANBALQ9NQG1 85 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 BET1LQ9NYM9 111 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 LRRC37A3O60309 1634 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 MUC3AQ02505 3323 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 ZNF831Q5JPB2 1677 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 ABCC6O95255 1503 aa1.1□□□□□ -2.23
SCAMP1-205ENST00000614488 PPLO60437 1756 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 CLTCL1P53675 1640 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 TRBV7-3A0A075B6L6 115 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 LOC110117498A0A087WWA1 95 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 TRBV7-1A0A0A6YYK4 115 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 IGKV3D-7A0A0C4DH55 119 aa1.09□□□□□ -2.23
SCAMP1-205ENST00000614488 IGKV3OR2-268A0A0C4DH90 116 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms