RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 CEND1Q8N111 149 aa7.23□□□□□ -1.25
SRGAP2B-204ENST00000612199 LINC00269Q8N2A0 174 aa7.23□□□□□ -1.25
SRGAP2B-204ENST00000612199 CEP192Q8TEP8 1941 aa7.23□□□□□ -1.25
SRGAP2B-204ENST00000612199 P0DMU3 169 aa7.23□□□□□ -1.25
SRGAP2B-204ENST00000612199 FAM231AP0DMU4 169 aa7.23□□□□□ -1.25
SRGAP2B-204ENST00000612199 FAM231CP0DMU5 169 aa7.23□□□□□ -1.25
SRGAP2B-204ENST00000612199 P0C879 139 aa7.23□□□□□ -1.25
SRGAP2B-204ENST00000612199 DAZAP2Q15038 168 aaPredicted RBP7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 RNF152Q8N8N0 203 aa7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 CDPF1Q6NVV7 123 aa7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 LAMA3Q16787 3333 aa7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 PRAC2D3DTV9 90 aa7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 H3BT86 120 aa7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 C19orf84I3L1E1 186 aa7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 TNRC6AQ8NDV7 1962 aaKnown RBP7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 MKI67P46013 3256 aaKnown RBP7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 PRRC2CQ9Y520 2896 aaKnown RBP7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 LINC01545Q5VT33 79 aa7.22□□□□□ -1.25
SRGAP2B-204ENST00000612199 ESRGQ1W209 222 aa7.21□□□□□ -1.25
SRGAP2B-204ENST00000612199 NUPR1O60356 82 aa7.21□□□□□ -1.26
SRGAP2B-204ENST00000612199 LINC01556Q5JQF7 62 aa7.21□□□□□ -1.26
SRGAP2B-204ENST00000612199 LINC00574Q9H8X3 128 aa7.21□□□□□ -1.26
SRGAP2B-204ENST00000612199 ALPK3Q96L96 1907 aa7.21□□□□□ -1.26
SRGAP2B-204ENST00000612199 TRBV6-1A0A0K0K1D8 114 aa7.21□□□□□ -1.26
SRGAP2B-204ENST00000612199 CRYGBP07316 175 aa7.21□□□□□ -1.26
SRGAP2B-204ENST00000612199 CCL25O15444 150 aa7.2□□□□□ -1.26
SRGAP2B-204ENST00000612199 C12orf74Q32Q52 190 aa7.2□□□□□ -1.26
SRGAP2B-204ENST00000612199 CRIP3Q6Q6R5 217 aa7.2□□□□□ -1.26
SRGAP2B-204ENST00000612199 KIAA1549Q9HCM3 1950 aa7.2□□□□□ -1.26
SRGAP2B-204ENST00000612199 SPANXDQ9BXN6 97 aa7.2□□□□□ -1.26
SRGAP2B-204ENST00000612199 C1orf137Q5JT78 98 aa7.2□□□□□ -1.26
SRGAP2B-204ENST00000612199 RPL39LQ96EH5 51 aaKnown RBP7.2□□□□□ -1.26
SRGAP2B-204ENST00000612199 EXPH5Q8NEV8 1989 aa7.2□□□□□ -1.26
SRGAP2B-204ENST00000612199 LINC01548A6NM66 108 aa7.2□□□□□ -1.26
SRGAP2B-204ENST00000612199 IGHV6-1A0A0B4J1U7 121 aa7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 BRWD1-AS2P59051 145 aa7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 COL4A4P53420 1690 aaPredicted RBP7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 CFC1BP0CG36 223 aa7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 CFC1P0CG37 223 aa7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 C1orf229Q6ZS94 237 aaPredicted RBP7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 SNURFQ9Y675 71 aa7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 DAZ2Q13117 558 aaKnown RBP7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 DAZ4Q86SG3 579 aaKnown RBP7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 DAZ3Q9NR90 486 aaKnown RBP7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 LY6G6DO95868 133 aa7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 UNQ9165/PRO28630Q6UXU0 137 aa7.19□□□□□ -1.26
SRGAP2B-204ENST00000612199 J3KT08 172 aa7.18□□□□□ -1.26
SRGAP2B-204ENST00000612199 PMAIP1Q13794 54 aa7.18□□□□□ -1.26
SRGAP2B-204ENST00000612199 LINC00173Q6ZV60 143 aa7.18□□□□□ -1.26
SRGAP2B-204ENST00000612199 FN1P02751 2386 aaKnown RBP7.18□□□□□ -1.26
SRGAP2B-204ENST00000612199 RBX1P62877 108 aa7.18□□□□□ -1.26
SRGAP2B-204ENST00000612199 LINC00322Q6ZN03 302 aaPredicted RBP7.18□□□□□ -1.26
SRGAP2B-204ENST00000612199 IGKV2D-30A0A075B6S6 120 aa7.17□□□□□ -1.26
SRGAP2B-204ENST00000612199 IGKV2-30P06310 120 aa7.17□□□□□ -1.26
SRGAP2B-204ENST00000612199 VPREB1P12018 145 aa7.17□□□□□ -1.26
SRGAP2B-204ENST00000612199 C1orf134Q5TEV5 83 aa7.17□□□□□ -1.26
SRGAP2B-204ENST00000612199 NDUFV3P56181 108 aaKnown RBP7.17□□□□□ -1.26
SRGAP2B-204ENST00000612199 IGLV8-61A0A075B6I0 122 aa7.17□□□□□ -1.26
SRGAP2B-204ENST00000612199 TRBV7-6A0A0J9YX20 115 aa7.17□□□□□ -1.26
SRGAP2B-204ENST00000612199 LOC100131303A0A0U1RQF7 123 aa7.17□□□□□ -1.26
SRGAP2B-204ENST00000612199 C19orf71A6NCJ1 209 aa7.16□□□□□ -1.26
SRGAP2B-204ENST00000612199 LMO4P61968 165 aa7.16□□□□□ -1.26
SRGAP2B-204ENST00000612199 C7orf65Q6ZTY9 151 aa7.16□□□□□ -1.26
SRGAP2B-204ENST00000612199 NUP210LQ5VU65 1888 aa7.16□□□□□ -1.26
SRGAP2B-204ENST00000612199 A0A0J9YXV3 536 aa7.16□□□□□ -1.26
SRGAP2B-204ENST00000612199 M0R2T5 61 aa7.16□□□□□ -1.26
SRGAP2B-204ENST00000612199 TDRG1Q3Y452 100 aa7.16□□□□□ -1.26
SRGAP2B-204ENST00000612199 Q6ZVH6 145 aa7.16□□□□□ -1.26
SRGAP2B-204ENST00000612199 LINC00526Q96FQ7 95 aa7.16□□□□□ -1.26
SRGAP2B-204ENST00000612199 ZNF462Q96JM2 2506 aa7.15□□□□□ -1.26
SRGAP2B-204ENST00000612199 A0A0B4J2C4 111 aa7.15□□□□□ -1.26
SRGAP2B-204ENST00000612199 C2orf70A6NJV1 201 aa7.15□□□□□ -1.26
SRGAP2B-204ENST00000612199 BEAN1Q3B7T3 259 aa7.15□□□□□ -1.26
SRGAP2B-204ENST00000612199 HIGD1BQ9P298 99 aa7.15□□□□□ -1.26
SRGAP2B-204ENST00000612199 SPACA4Q8TDM5 124 aa7.15□□□□□ -1.26
SRGAP2B-204ENST00000612199 SPANXB1Q9NS25 103 aaPredicted RBP7.15□□□□□ -1.26
SRGAP2B-204ENST00000612199 FSTL3O95633 263 aa7.15□□□□□ -1.27
SRGAP2B-204ENST00000612199 HCFC1P51610 2035 aa7.15□□□□□ -1.27
SRGAP2B-204ENST00000612199 C1orf195Q5TG92 126 aa7.14□□□□□ -1.27
SRGAP2B-204ENST00000612199 U3KQK5 164 aa7.14□□□□□ -1.27
SRGAP2B-204ENST00000612199 MYCNOSP40205 109 aa7.14□□□□□ -1.27
SRGAP2B-204ENST00000612199 REG3AQ06141 175 aa7.14□□□□□ -1.27
SRGAP2B-204ENST00000612199 SBSPONQ8IVN8 264 aa7.14□□□□□ -1.27
SRGAP2B-204ENST00000612199 ZNF295-AS1Q8N0V1 137 aa7.14□□□□□ -1.27
SRGAP2B-204ENST00000612199 C10orf25Q5T742 122 aa7.14□□□□□ -1.27
SRGAP2B-204ENST00000612199 NDUFA11Q86Y39 141 aa7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 C20orf197Q8N268 126 aa7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 FASNP49327 2511 aaKnown RBP7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 OXLD1Q5BKU9 147 aa7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 PRORYQ9H606 182 aa7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 TRBV7-3A0A075B6L6 115 aa7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 ODF3BA8MYP8 253 aa7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 PCOTHQ58A44 107 aa7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 MUC22E2RYF6 1773 aaPredicted RBP7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 C16orf90A8MZG2 172 aa7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 ATOX1O00244 68 aa7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 RPL39P62891 51 aaKnown RBP7.13□□□□□ -1.27
SRGAP2B-204ENST00000612199 LRRK2Q5S007 2527 aa7.12□□□□□ -1.27
SRGAP2B-204ENST00000612199 A0A1B0GXF2 115 aa7.12□□□□□ -1.27
SRGAP2B-204ENST00000612199 RNASE3P12724 160 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms