RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 TMEM242Q9NWH2 141 aa11.08□□□□□ -0.64
PRKN-208ENST00000610470 RPS10P46783 165 aaKnown RBP11.07□□□□□ -0.64
PRKN-208ENST00000610470 POLR2KP53803 58 aaKnown RBP11.07□□□□□ -0.64
PRKN-208ENST00000610470 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
PRKN-208ENST00000610470 AMN1Q8IY45 258 aa11.07□□□□□ -0.64
PRKN-208ENST00000610470 TRBV27A0A0K0K1C4 114 aa11.06□□□□□ -0.64
PRKN-208ENST00000610470 PPP1R17O96001 155 aa11.06□□□□□ -0.64
PRKN-208ENST00000610470 NUP35Q8NFH5 326 aa11.06□□□□□ -0.64
PRKN-208ENST00000610470 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
PRKN-208ENST00000610470 GVQW2A0A096LPI5 108 aaPredicted RBP11.05□□□□□ -0.64
PRKN-208ENST00000610470 CHTF8P0CG12 524 aa11.05□□□□□ -0.64
PRKN-208ENST00000610470 FOXI1Q12951 378 aa11.05□□□□□ -0.64
PRKN-208ENST00000610470 MRPL52Q86TS9 123 aaKnown RBP11.05□□□□□ -0.64
PRKN-208ENST00000610470 NAT8BQ9UHF3 227 aa11.05□□□□□ -0.64
PRKN-208ENST00000610470 A0A087WYN8 130 aa11.04□□□□□ -0.64
PRKN-208ENST00000610470 LINC00959A0A1B0GUT2 108 aa11.04□□□□□ -0.64
PRKN-208ENST00000610470 C7orf77A4D0Y5 90 aa11.04□□□□□ -0.64
PRKN-208ENST00000610470 VCYO14598 125 aa11.04□□□□□ -0.64
PRKN-208ENST00000610470 XCL1P47992 114 aa11.04□□□□□ -0.64
PRKN-208ENST00000610470 SMIM27A0A1W2PRY6 76 aa11.03□□□□□ -0.64
PRKN-208ENST00000610470 CCL25O15444 150 aa11.03□□□□□ -0.64
PRKN-208ENST00000610470 FCER1GP30273 86 aa11.03□□□□□ -0.64
PRKN-208ENST00000610470 COX6A2Q02221 97 aa11.03□□□□□ -0.64
PRKN-208ENST00000610470 SS18Q15532 418 aa11.03□□□□□ -0.64
PRKN-208ENST00000610470 CDC42SE2Q9NRR3 84 aa11.03□□□□□ -0.64
PRKN-208ENST00000610470 IGHV1-58A0A0C4DH39 117 aa11.02□□□□□ -0.65
PRKN-208ENST00000610470 SMKR1H3BMG3 65 aa11.02□□□□□ -0.65
PRKN-208ENST00000610470 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
PRKN-208ENST00000610470 SMAGPQ0VAQ4 97 aa11.02□□□□□ -0.65
PRKN-208ENST00000610470 ZNF664Q8N3J9 261 aa11.02□□□□□ -0.65
PRKN-208ENST00000610470 PLAC8Q9NZF1 115 aa11.02□□□□□ -0.65
PRKN-208ENST00000610470 PPP1R2P9O14990 202 aa11.01□□□□□ -0.65
PRKN-208ENST00000610470 SUMO2P61956 95 aaKnown RBP11.01□□□□□ -0.65
PRKN-208ENST00000610470 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
PRKN-208ENST00000610470 UQCC3Q6UW78 93 aa11.01□□□□□ -0.65
PRKN-208ENST00000610470 NRACQ8N912 160 aa11.01□□□□□ -0.65
PRKN-208ENST00000610470 KIR2DL4Q99706 377 aa11.01□□□□□ -0.65
PRKN-208ENST00000610470 PKIGQ9Y2B9 76 aa11.01□□□□□ -0.65
PRKN-208ENST00000610470 PNRC1Q12796 327 aaPredicted RBP11□□□□□ -0.65
PRKN-208ENST00000610470 CD164L2Q6UWJ8 174 aa11□□□□□ -0.65
PRKN-208ENST00000610470 PRSS3P2Q8NHM4 247 aa11□□□□□ -0.65
PRKN-208ENST00000610470 IGKV2-24A0A0C4DH68 120 aa10.99□□□□□ -0.65
PRKN-208ENST00000610470 A0A1B0GW15 77 aa10.99□□□□□ -0.65
PRKN-208ENST00000610470 MAJINQ3KP22 176 aa10.99□□□□□ -0.65
PRKN-208ENST00000610470 FAM104BQ5XKR9 115 aa10.99□□□□□ -0.65
PRKN-208ENST00000610470 COMMD7Q86VX2 200 aa10.99□□□□□ -0.65
PRKN-208ENST00000610470 C7orf33Q8WU49 177 aa10.99□□□□□ -0.65
PRKN-208ENST00000610470 TMEM218A2RU14 115 aa10.98□□□□□ -0.65
PRKN-208ENST00000610470 LINC00862A6NCI5 91 aa10.98□□□□□ -0.65
PRKN-208ENST00000610470 ADCYAP1P18509 176 aa10.98□□□□□ -0.65
PRKN-208ENST00000610470 CAMPP49913 170 aa10.98□□□□□ -0.65
PRKN-208ENST00000610470 MRPL51Q4U2R6 128 aaKnown RBP10.98□□□□□ -0.65
PRKN-208ENST00000610470 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
PRKN-208ENST00000610470 F8W036 122 aa10.97□□□□□ -0.65
PRKN-208ENST00000610470 ZNF561-AS1K7EIQ3 104 aa10.97□□□□□ -0.65
PRKN-208ENST00000610470 Q6ZRU5 148 aa10.97□□□□□ -0.65
PRKN-208ENST00000610470 TMEM18Q96B42 140 aa10.97□□□□□ -0.65
PRKN-208ENST00000610470 LINC00474Q9P2X8 69 aa10.97□□□□□ -0.65
PRKN-208ENST00000610470 UBE2D4Q9Y2X8 147 aa10.97□□□□□ -0.65
PRKN-208ENST00000610470 C1orf196B1AJZ1 125 aa10.96□□□□□ -0.65
PRKN-208ENST00000610470 MT-ND4LP03901 98 aa10.96□□□□□ -0.65
PRKN-208ENST00000610470 MRPL54Q6P161 138 aaKnown RBP10.96□□□□□ -0.65
PRKN-208ENST00000610470 STPG4Q8N801 248 aa10.96□□□□□ -0.65
PRKN-208ENST00000610470 CARD19Q96LW7 228 aa10.96□□□□□ -0.65
PRKN-208ENST00000610470 C20orf78Q9BR46 151 aa10.96□□□□□ -0.65
PRKN-208ENST00000610470 PHOX2AO14813 284 aa10.95□□□□□ -0.66
PRKN-208ENST00000610470 TCAPO15273 167 aa10.95□□□□□ -0.66
PRKN-208ENST00000610470 S100A8P05109 93 aa10.95□□□□□ -0.66
PRKN-208ENST00000610470 CKS2P33552 79 aa10.95□□□□□ -0.66
PRKN-208ENST00000610470 ANAPC16Q96DE5 110 aa10.95□□□□□ -0.66
PRKN-208ENST00000610470 LINC00526Q96FQ7 95 aa10.95□□□□□ -0.66
PRKN-208ENST00000610470 HMCN2Q8NDA2 5059 aa10.95□□□□□ -0.66
PRKN-208ENST00000610470 TRBV24-1A0A075B6N3 115 aa10.94□□□□□ -0.66
PRKN-208ENST00000610470 A0A096LNI7 61 aa10.94□□□□□ -0.66
PRKN-208ENST00000610470 MALP21145 153 aa10.94□□□□□ -0.66
PRKN-208ENST00000610470 RPL32P62910 135 aaKnown RBP10.94□□□□□ -0.66
PRKN-208ENST00000610470 COX7A2LO14548 114 aa10.93□□□□□ -0.66
PRKN-208ENST00000610470 HBBP68871 147 aa10.93□□□□□ -0.66
PRKN-208ENST00000610470 SYCNQ0VAF6 134 aa10.93□□□□□ -0.66
PRKN-208ENST00000610470 TIMM21Q9BVV7 248 aa10.93□□□□□ -0.66
PRKN-208ENST00000610470 TRAV13-1A0A0B4J241 112 aa10.92□□□□□ -0.66
PRKN-208ENST00000610470 TNFRSF6BO95407 300 aa10.92□□□□□ -0.66
PRKN-208ENST00000610470 RNASE13Q5GAN3 156 aaKnown RBP10.92□□□□□ -0.66
PRKN-208ENST00000610470 SEC11CQ9BY50 192 aa10.92□□□□□ -0.66
PRKN-208ENST00000610470 A0A1B0GXF2 115 aa10.91□□□□□ -0.66
PRKN-208ENST00000610470 Q6ZUT4 128 aa10.91□□□□□ -0.66
PRKN-208ENST00000610470 IGLV4-69A0A075B6H9 119 aa10.9□□□□□ -0.66
PRKN-208ENST00000610470 D6R8Y8 96 aa10.9□□□□□ -0.66
PRKN-208ENST00000610470 SMIM2Q9BVW6 85 aa10.9□□□□□ -0.66
PRKN-208ENST00000610470 APOMO95445 188 aa10.89□□□□□ -0.67
PRKN-208ENST00000610470 PPBPP02775 128 aa10.89□□□□□ -0.67
PRKN-208ENST00000610470 LOC107984640A0A0U1RRK4 108 aa10.88□□□□□ -0.67
PRKN-208ENST00000610470 PRR3P79522 188 aaKnown RBP10.88□□□□□ -0.67
PRKN-208ENST00000610470 ATP5L2Q7Z4Y8 100 aa10.88□□□□□ -0.67
PRKN-208ENST00000610470 CAMK2N2Q96S95 79 aa10.88□□□□□ -0.67
PRKN-208ENST00000610470 PLA2G2DQ9UNK4 145 aa10.88□□□□□ -0.67
PRKN-208ENST00000610470 NPYP01303 97 aa10.87□□□□□ -0.67
PRKN-208ENST00000610470 PTTG1IPP53801 180 aa10.87□□□□□ -0.67
PRKN-208ENST00000610470 RPL39P62891 51 aaKnown RBP10.87□□□□□ -0.67
PRKN-208ENST00000610470 C10orf91Q5T1B1 145 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms