RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 UBE2WQ96B02 151 aa14.84□□□□□ -0.03
SSBP3-216ENST00000610401 A0A0B4J2C4 111 aa14.84□□□□□ -0.03
SSBP3-216ENST00000610401 H7C423 109 aa14.83□□□□□ -0.03
SSBP3-216ENST00000610401 VSIG2Q96IQ7 327 aa14.83□□□□□ -0.04
SSBP3-216ENST00000610401 Q9H8V8 135 aa14.83□□□□□ -0.04
SSBP3-216ENST00000610401 TRGV1A0A0A0MS02 117 aa14.82□□□□□ -0.04
SSBP3-216ENST00000610401 DYNLRB2Q8TF09 96 aa14.82□□□□□ -0.04
SSBP3-216ENST00000610401 TMEM262E9PQX1 116 aa14.82□□□□□ -0.04
SSBP3-216ENST00000610401 SBSPONQ8IVN8 264 aa14.82□□□□□ -0.04
SSBP3-216ENST00000610401 HIVEP2P31629 2446 aa14.82□□□□□ -0.04
SSBP3-216ENST00000610401 FLNAP21333 2647 aaKnown RBP14.81□□□□□ -0.04
SSBP3-216ENST00000610401 CHCHD7Q9BUK0 85 aa14.81□□□□□ -0.04
SSBP3-216ENST00000610401 UBE2D4Q9Y2X8 147 aa14.81□□□□□ -0.04
SSBP3-216ENST00000610401 CCDC179H3BU77 68 aa14.81□□□□□ -0.04
SSBP3-216ENST00000610401 COX6CP09669 75 aa14.81□□□□□ -0.04
SSBP3-216ENST00000610401 LINC00694P0DN24 101 aa14.81□□□□□ -0.04
SSBP3-216ENST00000610401 PRB1P04280 392 aa14.81□□□□□ -0.04
SSBP3-216ENST00000610401 MRPS36P82909 103 aaKnown RBP14.81□□□□□ -0.04
SSBP3-216ENST00000610401 MEIG1Q5JSS6 88 aa14.81□□□□□ -0.04
SSBP3-216ENST00000610401 TRBV10-2A0A0K0K1G8 114 aa14.79□□□□□ -0.04
SSBP3-216ENST00000610401 MIAQ16674 131 aa14.78□□□□□ -0.04
SSBP3-216ENST00000610401 TMEM101Q96IK0 257 aa14.78□□□□□ -0.04
SSBP3-216ENST00000610401 TOMM7Q9P0U1 55 aa14.78□□□□□ -0.04
SSBP3-216ENST00000610401 ODF3Q96PU9 254 aa14.77□□□□□ -0.04
SSBP3-216ENST00000610401 PLA2G2AP14555 144 aa14.77□□□□□ -0.05
SSBP3-216ENST00000610401 GAGE12JA6NER3 117 aa14.77□□□□□ -0.05
SSBP3-216ENST00000610401 BRI3O95415 125 aa14.77□□□□□ -0.05
SSBP3-216ENST00000610401 GAGE4Q13068 117 aa14.77□□□□□ -0.05
SSBP3-216ENST00000610401 GAGE5Q13069 117 aa14.77□□□□□ -0.05
SSBP3-216ENST00000610401 NHLRC4P0CG21 123 aaPredicted RBP14.76□□□□□ -0.05
SSBP3-216ENST00000610401 PIK3CD-AS1Q5SR53 167 aa14.76□□□□□ -0.05
SSBP3-216ENST00000610401 Q8N2B8 174 aa14.76□□□□□ -0.05
SSBP3-216ENST00000610401 RS1O15537 224 aa14.76□□□□□ -0.05
SSBP3-216ENST00000610401 NDUFV3P56181 108 aaKnown RBP14.75□□□□□ -0.05
SSBP3-216ENST00000610401 ZNF415Q09FC8 603 aa14.75□□□□□ -0.05
SSBP3-216ENST00000610401 ITPR3Q14573 2671 aa14.75□□□□□ -0.05
SSBP3-216ENST00000610401 TRBV30A0A0K0K1B3 111 aa14.75□□□□□ -0.05
SSBP3-216ENST00000610401 PRIMA1Q86XR5 153 aa14.74□□□□□ -0.05
SSBP3-216ENST00000610401 C11orf68Q9H3H3 251 aaKnown RBP14.74□□□□□ -0.05
SSBP3-216ENST00000610401 ZNF702PQ9H963 129 aa14.74□□□□□ -0.05
SSBP3-216ENST00000610401 VPREB3Q9UKI3 123 aa14.74□□□□□ -0.05
SSBP3-216ENST00000610401 CHCHD5Q9BSY4 110 aa14.73□□□□□ -0.05
SSBP3-216ENST00000610401 LINC01356Q8N9X3 169 aa14.73□□□□□ -0.05
SSBP3-216ENST00000610401 CITED1Q99966 193 aa14.73□□□□□ -0.05
SSBP3-216ENST00000610401 MAP6D1Q9H9H5 199 aa14.73□□□□□ -0.05
SSBP3-216ENST00000610401 IFITM1P13164 125 aa14.72□□□□□ -0.05
SSBP3-216ENST00000610401 TINCRA0A1B0GVN0 87 aa14.72□□□□□ -0.05
SSBP3-216ENST00000610401 Q6ZTI0 123 aa14.72□□□□□ -0.05
SSBP3-216ENST00000610401 WFDC10AQ9H1F0 79 aa14.72□□□□□ -0.05
SSBP3-216ENST00000610401 Q9HAA7 133 aa14.71□□□□□ -0.05
SSBP3-216ENST00000610401 GAGE6Q13070 117 aa14.71□□□□□ -0.06
SSBP3-216ENST00000610401 CITED2Q99967 270 aaPredicted RBP14.71□□□□□ -0.06
SSBP3-216ENST00000610401 PYGO1Q9Y3Y4 419 aa14.71□□□□□ -0.06
SSBP3-216ENST00000610401 APCP25054 2843 aa14.7□□□□□ -0.06
SSBP3-216ENST00000610401 KRTAP10-9P60411 292 aa14.7□□□□□ -0.06
SSBP3-216ENST00000610401 LOC100131303A0A0U1RQF7 123 aa14.7□□□□□ -0.06
SSBP3-216ENST00000610401 CIRBPQ14011 172 aaKnown RBP14.69□□□□□ -0.06
SSBP3-216ENST00000610401 SOSTDC1Q6X4U4 206 aa14.69□□□□□ -0.06
SSBP3-216ENST00000610401 LINC00308Q8TCZ7 52 aa14.68□□□□□ -0.06
SSBP3-216ENST00000610401 LINC00242Q5T6M2 205 aa14.68□□□□□ -0.06
SSBP3-216ENST00000610401 SPANXA1Q9NS26 97 aa14.68□□□□□ -0.06
SSBP3-216ENST00000610401 NOP10Q9NPE3 64 aaKnown RBP14.67□□□□□ -0.06
SSBP3-216ENST00000610401 STHQ8IWL8 128 aa14.67□□□□□ -0.06
SSBP3-216ENST00000610401 TMEM89A2RUT3 159 aa14.67□□□□□ -0.06
SSBP3-216ENST00000610401 PRORYQ9H606 182 aa14.67□□□□□ -0.06
SSBP3-216ENST00000610401 LST1O00453 97 aa14.66□□□□□ -0.06
SSBP3-216ENST00000610401 RPL35AP18077 110 aaKnown RBP14.66□□□□□ -0.06
SSBP3-216ENST00000610401 INSP01308 110 aa14.66□□□□□ -0.06
SSBP3-216ENST00000610401 C11orf72Q8NBR9 251 aa14.66□□□□□ -0.06
SSBP3-216ENST00000610401 SPANXDQ9BXN6 97 aa14.66□□□□□ -0.06
SSBP3-216ENST00000610401 SPANXCQ9NY87 97 aa14.66□□□□□ -0.06
SSBP3-216ENST00000610401 GAGE7O76087 117 aa14.64□□□□□ -0.07
SSBP3-216ENST00000610401 GAGE12FP0CL80 117 aa14.64□□□□□ -0.07
SSBP3-216ENST00000610401 GAGE12GP0CL81 117 aa14.64□□□□□ -0.07
SSBP3-216ENST00000610401 GAGE12IP0CL82 117 aa14.64□□□□□ -0.07
SSBP3-216ENST00000610401 USP24Q9UPU5 2620 aa14.64□□□□□ -0.07
SSBP3-216ENST00000610401 NTM-AS1Q6ZSK4 140 aa14.63□□□□□ -0.07
SSBP3-216ENST00000610401 YAE1D1Q9NRH1 226 aa14.63□□□□□ -0.07
SSBP3-216ENST00000610401 TRGV2A0A075B6R0 118 aa14.62□□□□□ -0.07
SSBP3-216ENST00000610401 PFN2P35080 140 aa14.62□□□□□ -0.07
SSBP3-216ENST00000610401 UBE2L6O14933 153 aa14.61□□□□□ -0.07
SSBP3-216ENST00000610401 SMIM20Q8N5G0 67 aa14.61□□□□□ -0.07
SSBP3-216ENST00000610401 SMIM1B2RUZ4 78 aa14.61□□□□□ -0.07
SSBP3-216ENST00000610401 DEFB114Q30KQ6 69 aa14.61□□□□□ -0.07
SSBP3-216ENST00000610401 ODF3L2Q3SX64 289 aa14.61□□□□□ -0.07
SSBP3-216ENST00000610401 FAM218AQ96MZ4 157 aa14.61□□□□□ -0.07
SSBP3-216ENST00000610401 DAZ2Q13117 558 aaKnown RBP14.6□□□□□ -0.07
SSBP3-216ENST00000610401 Q6YL49 198 aa14.6□□□□□ -0.07
SSBP3-216ENST00000610401 DAZ4Q86SG3 579 aaKnown RBP14.6□□□□□ -0.07
SSBP3-216ENST00000610401 DAZ3Q9NR90 486 aaKnown RBP14.6□□□□□ -0.07
SSBP3-216ENST00000610401 PEMTQ9UBM1 199 aa14.6□□□□□ -0.07
SSBP3-216ENST00000610401 NDUFA1O15239 70 aa14.6□□□□□ -0.07
SSBP3-216ENST00000610401 C1orf158Q8N1D5 194 aa14.6□□□□□ -0.07
SSBP3-216ENST00000610401 Q96MF0 132 aa14.6□□□□□ -0.07
SSBP3-216ENST00000610401 RPL36AP83881 106 aaKnown RBP14.59□□□□□ -0.07
SSBP3-216ENST00000610401 RPL36ALQ969Q0 106 aaKnown RBP14.59□□□□□ -0.07
SSBP3-216ENST00000610401 ATP5G1P05496 136 aa14.59□□□□□ -0.07
SSBP3-216ENST00000610401 CLPSL2Q6UWE3 100 aa14.59□□□□□ -0.07
SSBP3-216ENST00000610401 FAM236AA0A1B0GUQ0 79 aa14.59□□□□□ -0.07
SSBP3-216ENST00000610401 FAM236BA0A1B0GV22 79 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms