RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ZNF117Q03924 483 aa2.69□□□□□ -1.98
LINC00397-202ENST00000606785 ATP5EP2Q5VTU8 51 aa2.69□□□□□ -1.98
LINC00397-202ENST00000606785 Q8N6K4 173 aa2.69□□□□□ -1.98
LINC00397-202ENST00000606785 FAM167A-AS1Q96KT0 104 aa2.69□□□□□ -1.98
LINC00397-202ENST00000606785 PROK2Q9HC23 129 aa2.69□□□□□ -1.98
LINC00397-202ENST00000606785 SHROOM3Q8TF72 1996 aa2.69□□□□□ -1.98
LINC00397-202ENST00000606785 PTPRSQ13332 1948 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 TRBV10-3A0A0K0K1G6 114 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 HCG22E2RYF7 251 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 C5orf67F2Z3F1 127 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 IGKV1-17P01599 117 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 IGLV6-57P01721 117 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 CCL3P10147 92 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 FAM229BQ4G0N7 80 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 C9orf116Q5BN46 136 aaPredicted RBP2.68□□□□□ -1.98
LINC00397-202ENST00000606785 ZNF826PQ6ZT77 177 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 SMCR5Q8TEV8 140 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 LINC00467Q9BRT7 94 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 DUOX1Q9NRD9 1551 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 RICTORQ6R327 1708 aa2.68□□□□□ -1.98
LINC00397-202ENST00000606785 MYO16Q9Y6X6 1858 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 TRAV22A0A0B4J277 110 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 IGKV2-24A0A0C4DH68 120 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 hDV103S1A0JD37 113 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 ERC2-IT1O76042 136 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 LY6HO94772 140 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 IFI6P09912 130 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 ZNF818PQ6ZRF7 136 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
LINC00397-202ENST00000606785 CNEP1R1Q8N9A8 125 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 LINC00304Q8N9R0 145 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 UBE2D4Q9Y2X8 147 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 A0A0G2JMZ2 1700 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 LRRC37A2A6NM11 1700 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 LRRC37AA6NMS7 1700 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 NHSL1Q5SYE7 1610 aa2.67□□□□□ -1.98
LINC00397-202ENST00000606785 COL11A1P12107 1806 aaPredicted RBP2.66□□□□□ -1.98
LINC00397-202ENST00000606785 A0A1W2PNN7 141 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 SMIM27A0A1W2PRY6 76 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 ZNF815PA8K554 130 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 C17orf51A8MQB3 221 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 C17orf98A8MV24 154 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 E7EUB6 86 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 IGLV1-51P01701 117 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 IGHV1-69P01742 117 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 COX6CP09669 75 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 SUPT4H1P63272 117 aaKnown RBP2.66□□□□□ -1.98
LINC00397-202ENST00000606785 MIAQ16674 131 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 GDF5OSQ5U4N7 250 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 DYNAPQ8N1N2 210 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 Q8N814 137 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 LIMD2Q9BT23 127 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 PSENENQ9NZ42 101 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 TIMM9Q9Y5J7 89 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 V9GYV3 84 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 LTBP4Q8N2S1 1624 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 MYO9BQ13459 2157 aa2.66□□□□□ -1.98
LINC00397-202ENST00000606785 NCOA6Q14686 2063 aaPredicted RBP2.65□□□□□ -1.98
LINC00397-202ENST00000606785 PCDH15Q96QU1 1955 aa2.65□□□□□ -1.98
LINC00397-202ENST00000606785 SCN3AQ9NY46 2000 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 IGKV2D-26A0A0A0MRZ7 120 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 IGHV3-73A0A0B4J1V6 119 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 TRBV30A0A0K0K1B3 111 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 CTXND1A0A1B0GTU2 59 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 SDHAF1A6NFY7 115 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 FCER1GP30273 86 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 EDDM3BP56851 147 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 SFTA2Q6UW10 78 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 BAZ2BQ9UIF8 2168 aaKnown RBP2.65□□□□□ -1.99
LINC00397-202ENST00000606785 TIAM2Q8IVF5 1701 aa2.65□□□□□ -1.99
LINC00397-202ENST00000606785 LMO7Q8WWI1 1683 aa2.64□□□□□ -1.99
LINC00397-202ENST00000606785 TMEM14DPA8MWL7 114 aa2.64□□□□□ -1.99
LINC00397-202ENST00000606785 B4DSR2 109 aa2.64□□□□□ -1.99
LINC00397-202ENST00000606785 CHKB-CPT1BH3BT56 60 aa2.64□□□□□ -1.99
LINC00397-202ENST00000606785 J3QRE1 110 aa2.64□□□□□ -1.99
LINC00397-202ENST00000606785 MSMBP08118 114 aa2.64□□□□□ -1.99
LINC00397-202ENST00000606785 S100A3P33764 101 aa2.64□□□□□ -1.99
LINC00397-202ENST00000606785 SPINT3P49223 89 aa2.64□□□□□ -1.99
LINC00397-202ENST00000606785 Q5VV11 94 aa2.64□□□□□ -1.99
LINC00397-202ENST00000606785 Q8IYB0 196 aa2.64□□□□□ -1.99
LINC00397-202ENST00000606785 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.64□□□□□ -1.99
LINC00397-202ENST00000606785 MUC22E2RYF6 1773 aaPredicted RBP2.64□□□□□ -1.99
LINC00397-202ENST00000606785 DOT1LQ8TEK3 1739 aa2.63□□□□□ -1.99
LINC00397-202ENST00000606785 A0A1W2PNM2 257 aa2.63□□□□□ -1.99
LINC00397-202ENST00000606785 ROMO1P60602 79 aa2.63□□□□□ -1.99
LINC00397-202ENST00000606785 C1orf134Q5TEV5 83 aa2.63□□□□□ -1.99
LINC00397-202ENST00000606785 CASC2Q6XLA1 102 aa2.63□□□□□ -1.99
LINC00397-202ENST00000606785 TMEM14BQ9NUH8 114 aa2.63□□□□□ -1.99
LINC00397-202ENST00000606785 MYOFQ9NZM1 2061 aa2.63□□□□□ -1.99
LINC00397-202ENST00000606785 PCNX2A6NKB5 2137 aa2.63□□□□□ -1.99
LINC00397-202ENST00000606785 PLXNB1O43157 2135 aa2.62□□□□□ -1.99
LINC00397-202ENST00000606785 EML5Q05BV3 1969 aa2.62□□□□□ -1.99
LINC00397-202ENST00000606785 CRPP02741 224 aa2.62□□□□□ -1.99
LINC00397-202ENST00000606785 PRB4P10163 310 aaPredicted RBP2.62□□□□□ -1.99
LINC00397-202ENST00000606785 RPL28P46779 137 aaKnown RBP2.62□□□□□ -1.99
LINC00397-202ENST00000606785 FXYD6P3P58550 94 aa2.62□□□□□ -1.99
LINC00397-202ENST00000606785 Q8NDZ9 215 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms