RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TEX43Q6ZNM6 134 aa15.53■□□□□ 0.08
IRF3-228ENST00000601291 Q6ZUT4 128 aa15.53■□□□□ 0.08
IRF3-228ENST00000601291 KLK5Q9Y337 293 aaPredicted RBP15.53■□□□□ 0.08
IRF3-228ENST00000601291 Q8N976 141 aa15.53■□□□□ 0.08
IRF3-228ENST00000601291 A0A087WX48 190 aa15.52■□□□□ 0.07
IRF3-228ENST00000601291 PRSS29PA6NIE9 313 aa15.51■□□□□ 0.07
IRF3-228ENST00000601291 ODF1Q14990 250 aa15.51■□□□□ 0.07
IRF3-228ENST00000601291 CST9LQ9H4G1 147 aa15.51■□□□□ 0.07
IRF3-228ENST00000601291 A0A1B0GUV1 79 aa15.5■□□□□ 0.07
IRF3-228ENST00000601291 ZNF664Q8N3J9 261 aa15.5■□□□□ 0.07
IRF3-228ENST00000601291 FAM104AQ969W3 186 aa15.5■□□□□ 0.07
IRF3-228ENST00000601291 AMELXQ99217 191 aa15.5■□□□□ 0.07
IRF3-228ENST00000601291 C2orf88Q9BSF0 95 aa15.5■□□□□ 0.07
IRF3-228ENST00000601291 CDC42SE2Q9NRR3 84 aa15.5■□□□□ 0.07
IRF3-228ENST00000601291 CHTOPQ9Y3Y2 248 aaKnown RBP15.5■□□□□ 0.07
IRF3-228ENST00000601291 FBN3Q75N90 2809 aa15.5■□□□□ 0.07
IRF3-228ENST00000601291 CCL18P55774 89 aa15.49■□□□□ 0.07
IRF3-228ENST00000601291 MPV17L2Q567V2 206 aa15.49■□□□□ 0.07
IRF3-228ENST00000601291 RNASE13Q5GAN3 156 aaKnown RBP15.49■□□□□ 0.07
IRF3-228ENST00000601291 PMCHL2Q9BQD1 86 aa15.49■□□□□ 0.07
IRF3-228ENST00000601291 RBX1P62877 108 aa15.49■□□□□ 0.07
IRF3-228ENST00000601291 ZC2HC1BQ5TFG8 222 aa15.49■□□□□ 0.07
IRF3-228ENST00000601291 F8VRH5 84 aa15.48■□□□□ 0.07
IRF3-228ENST00000601291 IGLV4-60A0A075B6I1 120 aa15.47■□□□□ 0.07
IRF3-228ENST00000601291 TCTAP57738 103 aa15.47■□□□□ 0.07
IRF3-228ENST00000601291 MRPL35Q9NZE8 188 aaKnown RBP15.47■□□□□ 0.07
IRF3-228ENST00000601291 APLNQ9ULZ1 77 aa15.46■□□□□ 0.07
IRF3-228ENST00000601291 DPM2O94777 84 aa15.45■□□□□ 0.06
IRF3-228ENST00000601291 PLNP26678 52 aa15.45■□□□□ 0.06
IRF3-228ENST00000601291 WFDC10BQ8IUB3 73 aa15.45■□□□□ 0.06
IRF3-228ENST00000601291 MRPS16Q9Y3D3 137 aaKnown RBP15.45■□□□□ 0.06
IRF3-228ENST00000601291 IGKCP01834 107 aa15.44■□□□□ 0.06
IRF3-228ENST00000601291 ATOH7Q8N100 152 aa15.44■□□□□ 0.06
IRF3-228ENST00000601291 LINC00588Q9Y4M8 146 aa15.44■□□□□ 0.06
IRF3-228ENST00000601291 ANGP03950 147 aaKnown RBP15.42■□□□□ 0.06
IRF3-228ENST00000601291 WWC2-AS2Q96NR7 200 aa15.42■□□□□ 0.06
IRF3-228ENST00000601291 C12orf57Q99622 126 aa15.42■□□□□ 0.06
IRF3-228ENST00000601291 IGLV4-69A0A075B6H9 119 aa15.41■□□□□ 0.06
IRF3-228ENST00000601291 CDPF1Q6NVV7 123 aa15.41■□□□□ 0.06
IRF3-228ENST00000601291 MUC7Q8TAX7 377 aa15.41■□□□□ 0.06
IRF3-228ENST00000601291 UBE2D1P51668 147 aa15.41■□□□□ 0.06
IRF3-228ENST00000601291 S100A12P80511 92 aa15.41■□□□□ 0.06
IRF3-228ENST00000601291 LINC00518Q8N0U6 118 aa15.41■□□□□ 0.06
IRF3-228ENST00000601291 Q8N3U1 123 aa15.41■□□□□ 0.06
IRF3-228ENST00000601291 TRAV13-1A0A0B4J241 112 aa15.4■□□□□ 0.06
IRF3-228ENST00000601291 IGHV3-30P01768 117 aa15.4■□□□□ 0.06
IRF3-228ENST00000601291 IGHV3-33P01772 117 aa15.4■□□□□ 0.06
IRF3-228ENST00000601291 IGLC3P0DOY3 106 aa15.4■□□□□ 0.06
IRF3-228ENST00000601291 IGHV3-30-3P0DP02 117 aa15.4■□□□□ 0.06
IRF3-228ENST00000601291 IGHV3-30-5P0DP03 117 aa15.4■□□□□ 0.06
IRF3-228ENST00000601291 ZFAND6Q6FIF0 208 aa15.4■□□□□ 0.06
IRF3-228ENST00000601291 IGKV3OR2-268A0A0C4DH90 116 aa15.39■□□□□ 0.05
IRF3-228ENST00000601291 A0A0J9YXV3 536 aa15.39■□□□□ 0.05
IRF3-228ENST00000601291 UPK3BQ9BT76 320 aa15.39■□□□□ 0.05
IRF3-228ENST00000601291 CHAC1Q9BUX1 264 aa15.39■□□□□ 0.05
IRF3-228ENST00000601291 VAMP8Q9BV40 100 aa15.39■□□□□ 0.05
IRF3-228ENST00000601291 HSBP1L1C9JCN9 74 aa15.38■□□□□ 0.05
IRF3-228ENST00000601291 SEC11AP67812 179 aa15.38■□□□□ 0.05
IRF3-228ENST00000601291 LINC01556Q5JQF7 62 aa15.38■□□□□ 0.05
IRF3-228ENST00000601291 NFE4Q86UQ8 179 aa15.38■□□□□ 0.05
IRF3-228ENST00000601291 UBE2DNLQ8IWF7 75 aa15.38■□□□□ 0.05
IRF3-228ENST00000601291 LINC00269Q8N2A0 174 aa15.38■□□□□ 0.05
IRF3-228ENST00000601291 TINCRA0A1B0GVN0 87 aa15.37■□□□□ 0.05
IRF3-228ENST00000601291 C11orf86A6NJI1 115 aa15.37■□□□□ 0.05
IRF3-228ENST00000601291 TRAV9-2A0A087WT02 112 aa15.36■□□□□ 0.05
IRF3-228ENST00000601291 SIVA1O15304 175 aa15.36■□□□□ 0.05
IRF3-228ENST00000601291 GEMIN7Q9H840 131 aaKnown RBP15.36■□□□□ 0.05
IRF3-228ENST00000601291 DNAH10OSP0CZ25 163 aa15.36■□□□□ 0.05
IRF3-228ENST00000601291 REG3AQ06141 175 aa15.36■□□□□ 0.05
IRF3-228ENST00000601291 CLPSL2Q6UWE3 100 aa15.36■□□□□ 0.05
IRF3-228ENST00000601291 FAM19A3Q7Z5A8 133 aa15.36■□□□□ 0.05
IRF3-228ENST00000601291 KLK12Q9UKR0 248 aa15.36■□□□□ 0.05
IRF3-228ENST00000601291 HERVK_113P63121 156 aa15.35■□□□□ 0.05
IRF3-228ENST00000601291 LINC00959A0A1B0GUT2 108 aa15.34■□□□□ 0.05
IRF3-228ENST00000601291 CRPP02741 224 aa15.34■□□□□ 0.05
IRF3-228ENST00000601291 SS18Q15532 418 aa15.34■□□□□ 0.05
IRF3-228ENST00000601291 LINC00242Q5T6M2 205 aa15.34■□□□□ 0.05
IRF3-228ENST00000601291 hDV102S1A0JD36 115 aa15.33■□□□□ 0.05
IRF3-228ENST00000601291 CCL25O15444 150 aa15.33■□□□□ 0.05
IRF3-228ENST00000601291 TMEM170BQ5T4T1 132 aa15.33■□□□□ 0.05
IRF3-228ENST00000601291 PAM16Q9Y3D7 125 aa15.33■□□□□ 0.05
IRF3-228ENST00000601291 MAJINQ3KP22 176 aa15.32■□□□□ 0.04
IRF3-228ENST00000601291 PRR34Q9NV39 138 aa15.32■□□□□ 0.04
IRF3-228ENST00000601291 ZNF22P17026 224 aaPredicted RBP15.31■□□□□ 0.04
IRF3-228ENST00000601291 SPATA45Q537H7 98 aa15.31■□□□□ 0.04
IRF3-228ENST00000601291 LINC00469Q8N7U9 141 aa15.31■□□□□ 0.04
IRF3-228ENST00000601291 STPG4Q8N801 248 aa15.31■□□□□ 0.04
IRF3-228ENST00000601291 Q9H8V8 135 aa15.3■□□□□ 0.04
IRF3-228ENST00000601291 HERVK_113P61574 105 aa15.29■□□□□ 0.04
IRF3-228ENST00000601291 UBE2WQ96B02 151 aa15.29■□□□□ 0.04
IRF3-228ENST00000601291 DYNC2H1Q8NCM8 4307 aaKnown RBP15.29■□□□□ 0.04
IRF3-228ENST00000601291 IGLV5-45A0A087WSX0 123 aa15.28■□□□□ 0.04
IRF3-228ENST00000601291 H3BRM9 83 aa15.28■□□□□ 0.04
IRF3-228ENST00000601291 COX6A2Q02221 97 aa15.28■□□□□ 0.04
IRF3-228ENST00000601291 ENHOQ6UWT2 76 aa15.28■□□□□ 0.04
IRF3-228ENST00000601291 C10orf126Q8N4M7 172 aa15.28■□□□□ 0.04
IRF3-228ENST00000601291 MIAQ16674 131 aa15.27■□□□□ 0.03
IRF3-228ENST00000601291 CDKN2A-AS1Q9UH64 79 aa15.27■□□□□ 0.03
IRF3-228ENST00000601291 DNAH7Q8WXX0 4024 aa15.27■□□□□ 0.03
IRF3-228ENST00000601291 K7EP13 123 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 229.6 ms