RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 C5orf38Q86SI9 138 aa11.72□□□□□ -0.53
SYDE1-204ENST00000600440 UBE2D4Q9Y2X8 147 aa11.72□□□□□ -0.53
SYDE1-204ENST00000600440 ATP5G1P05496 136 aa11.71□□□□□ -0.53
SYDE1-204ENST00000600440 INAFM2P0DMQ5 153 aa11.71□□□□□ -0.53
SYDE1-204ENST00000600440 PYGO1Q9Y3Y4 419 aa11.71□□□□□ -0.53
SYDE1-204ENST00000600440 IGF2-ASQ6U949 168 aa11.71□□□□□ -0.54
SYDE1-204ENST00000600440 CSMD2Q7Z408 3487 aa11.71□□□□□ -0.54
SYDE1-204ENST00000600440 NDUFA1O15239 70 aa11.7□□□□□ -0.54
SYDE1-204ENST00000600440 CRYGAP11844 174 aa11.7□□□□□ -0.54
SYDE1-204ENST00000600440 MALP21145 153 aa11.7□□□□□ -0.54
SYDE1-204ENST00000600440 BPESC1Q9GZL8 116 aa11.7□□□□□ -0.54
SYDE1-204ENST00000600440 ZNF292O60281 2723 aa11.7□□□□□ -0.54
SYDE1-204ENST00000600440 SNRPD3P62318 126 aaKnown RBP11.7□□□□□ -0.54
SYDE1-204ENST00000600440 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
SYDE1-204ENST00000600440 CHCHD7Q9BUK0 85 aa11.69□□□□□ -0.54
SYDE1-204ENST00000600440 IGKV3OR2-268A0A0C4DH90 116 aa11.69□□□□□ -0.54
SYDE1-204ENST00000600440 WFDC9Q8NEX5 89 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 DPH3Q96FX2 82 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 C22orf24Q9Y442 160 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 OXTP01178 125 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 C10orf105Q8TEF2 133 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 TOMM7Q9P0U1 55 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 CXCL5P42830 114 aa11.68□□□□□ -0.54
SYDE1-204ENST00000600440 H3BUX3 64 aa11.67□□□□□ -0.54
SYDE1-204ENST00000600440 SLPIP03973 132 aa11.67□□□□□ -0.54
SYDE1-204ENST00000600440 LINC00846Q9NV44 126 aa11.67□□□□□ -0.54
SYDE1-204ENST00000600440 VPS13CQ709C8 3753 aa11.67□□□□□ -0.54
SYDE1-204ENST00000600440 NCR3O14931 201 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 C10orf99Q6UWK7 81 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 A0A087WYN8 130 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 TIMM17BO60830 172 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 RBMY1A1P0DJD3 496 aaKnown RBP11.66□□□□□ -0.54
SYDE1-204ENST00000600440 RBMY1CP0DJD4 496 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 RBMY1FQ15415 496 aaKnown RBP11.66□□□□□ -0.54
SYDE1-204ENST00000600440 BEAN1Q3B7T3 259 aa11.66□□□□□ -0.54
SYDE1-204ENST00000600440 HIVEP3Q5T1R4 2406 aa11.65□□□□□ -0.54
SYDE1-204ENST00000600440 CRPP02741 224 aa11.65□□□□□ -0.54
SYDE1-204ENST00000600440 USP17L23D6RBM5 183 aa11.65□□□□□ -0.54
SYDE1-204ENST00000600440 USMG5Q96IX5 58 aa11.65□□□□□ -0.54
SYDE1-204ENST00000600440 MYO9AB2RTY4 2548 aa11.65□□□□□ -0.55
SYDE1-204ENST00000600440 IGHV3OR16-12A0A075B7B8 117 aa11.64□□□□□ -0.55
SYDE1-204ENST00000600440 HILS1P60008 231 aa11.64□□□□□ -0.55
SYDE1-204ENST00000600440 KLK9Q2XQG4 91 aa11.64□□□□□ -0.55
SYDE1-204ENST00000600440 SERP2Q8N6R1 65 aa11.64□□□□□ -0.55
SYDE1-204ENST00000600440 ABCA2Q9BZC7 2435 aa11.63□□□□□ -0.55
SYDE1-204ENST00000600440 TRAV25A0A0B4J276 109 aa11.63□□□□□ -0.55
SYDE1-204ENST00000600440 F5H768 121 aa11.63□□□□□ -0.55
SYDE1-204ENST00000600440 A0A1W2PPR1 153 aa11.63□□□□□ -0.55
SYDE1-204ENST00000600440 LINC00242Q5T6M2 205 aa11.63□□□□□ -0.55
SYDE1-204ENST00000600440 C19orf54Q5BKX5 351 aa11.62□□□□□ -0.55
SYDE1-204ENST00000600440 PIMREGQ9BSJ6 248 aa11.62□□□□□ -0.55
SYDE1-204ENST00000600440 LECT2O14960 151 aa11.62□□□□□ -0.55
SYDE1-204ENST00000600440 RNASE1P07998 156 aaKnown RBP11.62□□□□□ -0.55
SYDE1-204ENST00000600440 TMEM258P61165 79 aa11.62□□□□□ -0.55
SYDE1-204ENST00000600440 CFHR3Q02985 330 aa11.62□□□□□ -0.55
SYDE1-204ENST00000600440 TRAV23DV6A0A075B6W5 121 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 HIST2H2BCQ6DN03 193 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 HIST2H2BDQ6DRA6 164 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 C11orf71Q6IPW1 123 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 SETD2Q9BYW2 2564 aaPredicted RBP11.61□□□□□ -0.55
SYDE1-204ENST00000600440 IGHV3-53P01767 116 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 IGHV4-38-2P0DP08 117 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 LINC01561Q8N1V8 128 aa11.61□□□□□ -0.55
SYDE1-204ENST00000600440 USP9YO00507 2555 aaPredicted RBP11.6□□□□□ -0.55
SYDE1-204ENST00000600440 SMIM1B2RUZ4 78 aa11.6□□□□□ -0.55
SYDE1-204ENST00000600440 MIR7-3HGQ8N6C7 128 aa11.6□□□□□ -0.55
SYDE1-204ENST00000600440 LINC00337Q8N6G1 96 aa11.6□□□□□ -0.55
SYDE1-204ENST00000600440 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
SYDE1-204ENST00000600440 RPS28P62857 69 aaKnown RBP11.6□□□□□ -0.55
SYDE1-204ENST00000600440 LINC00158P58513 81 aa11.59□□□□□ -0.55
SYDE1-204ENST00000600440 SND1-IT1Q9HBX3 110 aa11.59□□□□□ -0.55
SYDE1-204ENST00000600440 MUC6Q6W4X9 2439 aa11.59□□□□□ -0.55
SYDE1-204ENST00000600440 LMO4P61968 165 aa11.58□□□□□ -0.55
SYDE1-204ENST00000600440 COPS9Q8WXC6 57 aa11.58□□□□□ -0.55
SYDE1-204ENST00000600440 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.55
SYDE1-204ENST00000600440 PFN2P35080 140 aa11.58□□□□□ -0.56
SYDE1-204ENST00000600440 DEFB131AP59861 70 aa11.58□□□□□ -0.56
SYDE1-204ENST00000600440 SMIM11BQ8TCY0 68 aa11.58□□□□□ -0.56
SYDE1-204ENST00000600440 RPL36AP83881 106 aaKnown RBP11.57□□□□□ -0.56
SYDE1-204ENST00000600440 FHL2Q14192 279 aa11.57□□□□□ -0.56
SYDE1-204ENST00000600440 RPL36ALQ969Q0 106 aaKnown RBP11.57□□□□□ -0.56
SYDE1-204ENST00000600440 FAM222AQ5U5X8 452 aa11.57□□□□□ -0.56
SYDE1-204ENST00000600440 K7EQG2 157 aa11.56□□□□□ -0.56
SYDE1-204ENST00000600440 C20orf197Q8N268 126 aa11.56□□□□□ -0.56
SYDE1-204ENST00000600440 GHRHP01286 108 aa11.56□□□□□ -0.56
SYDE1-204ENST00000600440 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
SYDE1-204ENST00000600440 IGLV5-39A0A0G2JS06 123 aa11.55□□□□□ -0.56
SYDE1-204ENST00000600440 PAX4O43316 350 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 TLN2Q9Y4G6 2542 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 Q6JHZ5 121 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 PTPN13Q12923 2485 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 NCOR2Q9Y618 2525 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 SONP18583 2426 aaKnown RBP11.54□□□□□ -0.56
SYDE1-204ENST00000600440 FAM19A1Q7Z5A9 133 aa11.54□□□□□ -0.56
SYDE1-204ENST00000600440 CHD8Q9HCK8 2581 aa11.53□□□□□ -0.56
SYDE1-204ENST00000600440 Q5XG85 94 aa11.53□□□□□ -0.56
SYDE1-204ENST00000600440 TMEM243Q9BU79 118 aa11.53□□□□□ -0.56
SYDE1-204ENST00000600440 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.56
SYDE1-204ENST00000600440 IGKV2D-28P01615 120 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms