RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 MRPS16Q9Y3D3 137 aaKnown RBP10.04□□□□□ -0.8
VRK3-212ENST00000596814 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
VRK3-212ENST00000596814 A0A087WX48 190 aa10.03□□□□□ -0.8
VRK3-212ENST00000596814 SYS1-DBNDD2H3BUS1 97 aa10.03□□□□□ -0.8
VRK3-212ENST00000596814 PRSS1P07477 247 aa10.03□□□□□ -0.8
VRK3-212ENST00000596814 MRPS36P82909 103 aaKnown RBP10.03□□□□□ -0.8
VRK3-212ENST00000596814 WFDC10BQ8IUB3 73 aa10.03□□□□□ -0.8
VRK3-212ENST00000596814 A0A1B0GUV1 79 aa10.02□□□□□ -0.8
VRK3-212ENST00000596814 RBX1P62877 108 aa10.02□□□□□ -0.8
VRK3-212ENST00000596814 Q8N976 141 aa10.02□□□□□ -0.8
VRK3-212ENST00000596814 FAM104AQ969W3 186 aa10.02□□□□□ -0.8
VRK3-212ENST00000596814 IGLV4-60A0A075B6I1 120 aa10.02□□□□□ -0.81
VRK3-212ENST00000596814 RNASE13Q5GAN3 156 aaKnown RBP10.02□□□□□ -0.81
VRK3-212ENST00000596814 STARD9Q9P2P6 4700 aa10.01□□□□□ -0.81
VRK3-212ENST00000596814 PMVKQ15126 192 aa10.01□□□□□ -0.81
VRK3-212ENST00000596814 PET117Q6UWS5 81 aa10.01□□□□□ -0.81
VRK3-212ENST00000596814 TEX43Q6ZNM6 134 aa10.01□□□□□ -0.81
VRK3-212ENST00000596814 ZNF664Q8N3J9 261 aa10.01□□□□□ -0.81
VRK3-212ENST00000596814 Q8N3U1 123 aa10.01□□□□□ -0.81
VRK3-212ENST00000596814 VCX2Q9H322 139 aa10.01□□□□□ -0.81
VRK3-212ENST00000596814 CDC42SE2Q9NRR3 84 aa10.01□□□□□ -0.81
VRK3-212ENST00000596814 TRAV12-1A0A0B4J245 112 aa10□□□□□ -0.81
VRK3-212ENST00000596814 ZC2HC1BQ5TFG8 222 aa10□□□□□ -0.81
VRK3-212ENST00000596814 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
VRK3-212ENST00000596814 UBE2DNLQ8IWF7 75 aa10□□□□□ -0.81
VRK3-212ENST00000596814 AMELXQ99217 191 aa10□□□□□ -0.81
VRK3-212ENST00000596814 UPK3BQ9BT76 320 aa10□□□□□ -0.81
VRK3-212ENST00000596814 C2orf88Q9BSF0 95 aa9.99□□□□□ -0.81
VRK3-212ENST00000596814 C20orf202A1L168 122 aa9.99□□□□□ -0.81
VRK3-212ENST00000596814 PRSS29PA6NIE9 313 aa9.99□□□□□ -0.81
VRK3-212ENST00000596814 CST9LQ9H4G1 147 aa9.99□□□□□ -0.81
VRK3-212ENST00000596814 SIVA1O15304 175 aa9.98□□□□□ -0.81
VRK3-212ENST00000596814 IGHV3-30P01768 117 aa9.98□□□□□ -0.81
VRK3-212ENST00000596814 IGHV3-33P01772 117 aa9.98□□□□□ -0.81
VRK3-212ENST00000596814 ANGP03950 147 aaKnown RBP9.98□□□□□ -0.81
VRK3-212ENST00000596814 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
VRK3-212ENST00000596814 IGHV3-30-5P0DP03 117 aa9.98□□□□□ -0.81
VRK3-212ENST00000596814 ODF1Q14990 250 aa9.98□□□□□ -0.81
VRK3-212ENST00000596814 LINC01556Q5JQF7 62 aa9.98□□□□□ -0.81
VRK3-212ENST00000596814 LINC01545Q5VT33 79 aa9.98□□□□□ -0.81
VRK3-212ENST00000596814 LGALS9CQ6DKI2 356 aa9.98□□□□□ -0.81
VRK3-212ENST00000596814 PLECQ15149 4684 aaKnown RBP9.98□□□□□ -0.81
VRK3-212ENST00000596814 DNAH10OSP0CZ25 163 aa9.97□□□□□ -0.81
VRK3-212ENST00000596814 C3orf84H3BNL1 204 aa9.96□□□□□ -0.81
VRK3-212ENST00000596814 SCGB1D1O95968 90 aa9.96□□□□□ -0.81
VRK3-212ENST00000596814 JOSD1Q15040 202 aaPredicted RBP9.96□□□□□ -0.81
VRK3-212ENST00000596814 PMCHL2Q9BQD1 86 aa9.96□□□□□ -0.81
VRK3-212ENST00000596814 CHTOPQ9Y3Y2 248 aaKnown RBP9.96□□□□□ -0.81
VRK3-212ENST00000596814 F8VRH5 84 aa9.96□□□□□ -0.82
VRK3-212ENST00000596814 CASC10Q5T4H9 136 aa9.96□□□□□ -0.82
VRK3-212ENST00000596814 CLPSL2Q6UWE3 100 aa9.96□□□□□ -0.82
VRK3-212ENST00000596814 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.82
VRK3-212ENST00000596814 IGKV3OR2-268A0A0C4DH90 116 aa9.95□□□□□ -0.82
VRK3-212ENST00000596814 PYY3Q5JQD4 70 aa9.95□□□□□ -0.82
VRK3-212ENST00000596814 LINC00269Q8N2A0 174 aa9.95□□□□□ -0.82
VRK3-212ENST00000596814 KLK12Q9UKR0 248 aa9.95□□□□□ -0.82
VRK3-212ENST00000596814 TENM2Q9NT68 2774 aa9.95□□□□□ -0.82
VRK3-212ENST00000596814 TRAV13-1A0A0B4J241 112 aa9.94□□□□□ -0.82
VRK3-212ENST00000596814 UBE2D1P51668 147 aa9.94□□□□□ -0.82
VRK3-212ENST00000596814 CTAG1AP78358 180 aa9.94□□□□□ -0.82
VRK3-212ENST00000596814 Q9H8V8 135 aa9.94□□□□□ -0.82
VRK3-212ENST00000596814 IGLV4-69A0A075B6H9 119 aa9.93□□□□□ -0.82
VRK3-212ENST00000596814 REG3AQ06141 175 aa9.93□□□□□ -0.82
VRK3-212ENST00000596814 DPM2O94777 84 aa9.93□□□□□ -0.82
VRK3-212ENST00000596814 CRPP02741 224 aa9.93□□□□□ -0.82
VRK3-212ENST00000596814 PLNP26678 52 aa9.93□□□□□ -0.82
VRK3-212ENST00000596814 PRR34Q9NV39 138 aa9.93□□□□□ -0.82
VRK3-212ENST00000596814 A0A0J9YXV3 536 aa9.92□□□□□ -0.82
VRK3-212ENST00000596814 IGLC3P0DOY3 106 aa9.92□□□□□ -0.82
VRK3-212ENST00000596814 LYSTQ99698 3801 aa9.92□□□□□ -0.82
VRK3-212ENST00000596814 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
VRK3-212ENST00000596814 IGKCP01834 107 aa9.91□□□□□ -0.82
VRK3-212ENST00000596814 ATOH7Q8N100 152 aa9.91□□□□□ -0.82
VRK3-212ENST00000596814 UBE2WQ96B02 151 aa9.91□□□□□ -0.82
VRK3-212ENST00000596814 CHAC1Q9BUX1 264 aa9.91□□□□□ -0.82
VRK3-212ENST00000596814 TINCRA0A1B0GVN0 87 aa9.9□□□□□ -0.82
VRK3-212ENST00000596814 C11orf86A6NJI1 115 aa9.9□□□□□ -0.82
VRK3-212ENST00000596814 SMIM6P0DI80 62 aa9.9□□□□□ -0.82
VRK3-212ENST00000596814 SEC11AP67812 179 aa9.9□□□□□ -0.82
VRK3-212ENST00000596814 SS18Q15532 418 aa9.9□□□□□ -0.82
VRK3-212ENST00000596814 FAM19A3Q7Z5A8 133 aa9.9□□□□□ -0.82
VRK3-212ENST00000596814 NFE4Q86UQ8 179 aa9.9□□□□□ -0.82
VRK3-212ENST00000596814 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.82
VRK3-212ENST00000596814 TRAV9-2A0A087WT02 112 aa9.9□□□□□ -0.83
VRK3-212ENST00000596814 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.83
VRK3-212ENST00000596814 ENHOQ6UWT2 76 aa9.9□□□□□ -0.83
VRK3-212ENST00000596814 GEMIN7Q9H840 131 aaKnown RBP9.9□□□□□ -0.83
VRK3-212ENST00000596814 CCL25O15444 150 aa9.89□□□□□ -0.83
VRK3-212ENST00000596814 K7EP13 123 aa9.88□□□□□ -0.83
VRK3-212ENST00000596814 HERVK_113P63121 156 aa9.88□□□□□ -0.83
VRK3-212ENST00000596814 MIAQ16674 131 aa9.88□□□□□ -0.83
VRK3-212ENST00000596814 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
VRK3-212ENST00000596814 IBA57-AS1B1ANH7 110 aa9.87□□□□□ -0.83
VRK3-212ENST00000596814 CDPF1Q6NVV7 123 aa9.87□□□□□ -0.83
VRK3-212ENST00000596814 ZNF22P17026 224 aaPredicted RBP9.87□□□□□ -0.83
VRK3-212ENST00000596814 XCL1P47992 114 aa9.87□□□□□ -0.83
VRK3-212ENST00000596814 COX6A2Q02221 97 aa9.87□□□□□ -0.83
VRK3-212ENST00000596814 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
VRK3-212ENST00000596814 LINC00469Q8N7U9 141 aa9.87□□□□□ -0.83
VRK3-212ENST00000596814 CHCHD10Q8WYQ3 142 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms