RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 PPP1R17O96001 155 aa13.09□□□□□ -0.31
PNKP-207ENST00000596014 LINC01545Q5VT33 79 aa13.09□□□□□ -0.31
PNKP-207ENST00000596014 DEFB104AQ8WTQ1 72 aa13.09□□□□□ -0.31
PNKP-207ENST00000596014 DNAH17Q9UFH2 4485 aa13.09□□□□□ -0.31
PNKP-207ENST00000596014 H0Y8G0 127 aa13.08□□□□□ -0.31
PNKP-207ENST00000596014 IGHV3-30P01768 117 aa13.08□□□□□ -0.31
PNKP-207ENST00000596014 IGHV3-33P01772 117 aa13.08□□□□□ -0.31
PNKP-207ENST00000596014 IGHV3-30-3P0DP02 117 aa13.08□□□□□ -0.31
PNKP-207ENST00000596014 IGHV3-30-5P0DP03 117 aa13.08□□□□□ -0.31
PNKP-207ENST00000596014 C1orf134Q5TEV5 83 aa13.08□□□□□ -0.31
PNKP-207ENST00000596014 TRBV25-1A0A075B6N4 114 aa13.08□□□□□ -0.32
PNKP-207ENST00000596014 FCER1GP30273 86 aa13.08□□□□□ -0.32
PNKP-207ENST00000596014 COTL1Q14019 142 aa13.08□□□□□ -0.32
PNKP-207ENST00000596014 Q8N3U1 123 aa13.08□□□□□ -0.32
PNKP-207ENST00000596014 POLR2KP53803 58 aaKnown RBP13.07□□□□□ -0.32
PNKP-207ENST00000596014 MAJINQ3KP22 176 aa13.07□□□□□ -0.32
PNKP-207ENST00000596014 MIEN1Q9BRT3 115 aa13.07□□□□□ -0.32
PNKP-207ENST00000596014 C6orf223Q8N319 242 aa13.06□□□□□ -0.32
PNKP-207ENST00000596014 C10orf126Q8N4M7 172 aa13.06□□□□□ -0.32
PNKP-207ENST00000596014 C20orf78Q9BR46 151 aa13.06□□□□□ -0.32
PNKP-207ENST00000596014 CHCHD5Q9BSY4 110 aa13.06□□□□□ -0.32
PNKP-207ENST00000596014 TMEM262E9PQX1 116 aa13.05□□□□□ -0.32
PNKP-207ENST00000596014 I3L3M4 83 aa13.05□□□□□ -0.32
PNKP-207ENST00000596014 RTL8CO15255 209 aa13.05□□□□□ -0.32
PNKP-207ENST00000596014 SUMO2P61956 95 aaKnown RBP13.05□□□□□ -0.32
PNKP-207ENST00000596014 IFI27L1Q96BM0 104 aa13.05□□□□□ -0.32
PNKP-207ENST00000596014 FAT2Q9NYQ8 4349 aa13.05□□□□□ -0.32
PNKP-207ENST00000596014 LAGE3Q14657 143 aa13.05□□□□□ -0.32
PNKP-207ENST00000596014 A0A087WX48 190 aa13.04□□□□□ -0.32
PNKP-207ENST00000596014 TRBV27A0A0K0K1C4 114 aa13.04□□□□□ -0.32
PNKP-207ENST00000596014 VCYO14598 125 aa13.03□□□□□ -0.32
PNKP-207ENST00000596014 IGLC3P0DOY3 106 aa13.03□□□□□ -0.32
PNKP-207ENST00000596014 TMEM243Q9BU79 118 aa13.03□□□□□ -0.32
PNKP-207ENST00000596014 CHCHD7Q9BUK0 85 aa13.03□□□□□ -0.32
PNKP-207ENST00000596014 UQCR10Q9UDW1 63 aa13.03□□□□□ -0.32
PNKP-207ENST00000596014 IBA57-AS1B1ANH7 110 aa13.02□□□□□ -0.32
PNKP-207ENST00000596014 TCAPO15273 167 aa13.02□□□□□ -0.32
PNKP-207ENST00000596014 PMCHL2Q9BQD1 86 aa13.02□□□□□ -0.32
PNKP-207ENST00000596014 TSHBP01222 138 aa13.02□□□□□ -0.33
PNKP-207ENST00000596014 GAGE6Q13070 117 aa13.02□□□□□ -0.33
PNKP-207ENST00000596014 MPV17L2Q567V2 206 aa13.02□□□□□ -0.33
PNKP-207ENST00000596014 hDV102S1A0JD36 115 aa13.01□□□□□ -0.33
PNKP-207ENST00000596014 K7EMI3 77 aa13.01□□□□□ -0.33
PNKP-207ENST00000596014 RPL32P62910 135 aaKnown RBP13.01□□□□□ -0.33
PNKP-207ENST00000596014 ORMDL2Q53FV1 153 aa13□□□□□ -0.33
PNKP-207ENST00000596014 HSBP1L1C9JCN9 74 aa12.99□□□□□ -0.33
PNKP-207ENST00000596014 EREGO14944 169 aa12.99□□□□□ -0.33
PNKP-207ENST00000596014 LINC00336Q6ZUF6 198 aa12.99□□□□□ -0.33
PNKP-207ENST00000596014 KLK12Q9UKR0 248 aa12.99□□□□□ -0.33
PNKP-207ENST00000596014 ATP5LO75964 103 aa12.99□□□□□ -0.33
PNKP-207ENST00000596014 MRPL52Q86TS9 123 aaKnown RBP12.99□□□□□ -0.33
PNKP-207ENST00000596014 UBE2L6O14933 153 aa12.98□□□□□ -0.33
PNKP-207ENST00000596014 RBX1P62877 108 aa12.98□□□□□ -0.33
PNKP-207ENST00000596014 NFE4Q86UQ8 179 aa12.98□□□□□ -0.33
PNKP-207ENST00000596014 KIR2DL4Q99706 377 aa12.98□□□□□ -0.33
PNKP-207ENST00000596014 HNRNPA3P51991 378 aaKnown RBP12.97□□□□□ -0.33
PNKP-207ENST00000596014 Q6ZRN7 208 aaPredicted RBP12.97□□□□□ -0.33
PNKP-207ENST00000596014 Q6ZN92 141 aa12.96□□□□□ -0.33
PNKP-207ENST00000596014 Q9HAA7 133 aa12.96□□□□□ -0.33
PNKP-207ENST00000596014 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.96□□□□□ -0.34
PNKP-207ENST00000596014 A0A1B0GUV1 79 aa12.96□□□□□ -0.34
PNKP-207ENST00000596014 IGKV2-29A2NJV5 120 aaPredicted RBP12.96□□□□□ -0.34
PNKP-207ENST00000596014 PRSS29PA6NIE9 313 aa12.96□□□□□ -0.34
PNKP-207ENST00000596014 H7C423 109 aa12.96□□□□□ -0.34
PNKP-207ENST00000596014 ANGP03950 147 aaKnown RBP12.96□□□□□ -0.34
PNKP-207ENST00000596014 TRAV8-3A0A0A6YYJ7 113 aa12.95□□□□□ -0.34
PNKP-207ENST00000596014 SNHG12Q9BXW3 62 aa12.95□□□□□ -0.34
PNKP-207ENST00000596014 PKD1P98161 4303 aa12.95□□□□□ -0.34
PNKP-207ENST00000596014 M0R143 59 aa12.94□□□□□ -0.34
PNKP-207ENST00000596014 ODF1Q14990 250 aa12.94□□□□□ -0.34
PNKP-207ENST00000596014 UBE2WQ96B02 151 aa12.94□□□□□ -0.34
PNKP-207ENST00000596014 TOMM6Q96B49 74 aa12.94□□□□□ -0.34
PNKP-207ENST00000596014 TNP2Q05952 138 aa12.93□□□□□ -0.34
PNKP-207ENST00000596014 LBHQ53QV2 105 aaPredicted RBP12.93□□□□□ -0.34
PNKP-207ENST00000596014 C20orf203Q8NBC4 194 aa12.93□□□□□ -0.34
PNKP-207ENST00000596014 IGLV4-60A0A075B6I1 120 aa12.93□□□□□ -0.34
PNKP-207ENST00000596014 C2orf88Q9BSF0 95 aa12.93□□□□□ -0.34
PNKP-207ENST00000596014 PRSS1P07477 247 aa12.92□□□□□ -0.34
PNKP-207ENST00000596014 FGF6P10767 208 aa12.92□□□□□ -0.34
PNKP-207ENST00000596014 AMMECR1LQ6DCA0 310 aa12.92□□□□□ -0.34
PNKP-207ENST00000596014 ENHOQ6UWT2 76 aa12.92□□□□□ -0.34
PNKP-207ENST00000596014 C2orf66Q6UXQ4 117 aa12.92□□□□□ -0.34
PNKP-207ENST00000596014 LINC00269Q8N2A0 174 aa12.91□□□□□ -0.34
PNKP-207ENST00000596014 PRR34Q9NV39 138 aa12.91□□□□□ -0.34
PNKP-207ENST00000596014 HECTD4Q9Y4D8 3996 aa12.91□□□□□ -0.34
PNKP-207ENST00000596014 DNAH11Q96DT5 4516 aa12.91□□□□□ -0.34
PNKP-207ENST00000596014 EPPK1P58107 5090 aaKnown RBP12.9□□□□□ -0.34
PNKP-207ENST00000596014 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.9□□□□□ -0.34
PNKP-207ENST00000596014 CRPP02741 224 aa12.9□□□□□ -0.34
PNKP-207ENST00000596014 ANKRD39Q53RE8 183 aa12.9□□□□□ -0.34
PNKP-207ENST00000596014 SCGB3A1Q96QR1 104 aa12.9□□□□□ -0.34
PNKP-207ENST00000596014 TP73-AS1Q9UF72 201 aa12.9□□□□□ -0.34
PNKP-207ENST00000596014 ZNF25P17030 456 aaPredicted RBP12.89□□□□□ -0.35
PNKP-207ENST00000596014 SLC25A34Q6PIV7 304 aa12.89□□□□□ -0.35
PNKP-207ENST00000596014 CLPSL2Q6UWE3 100 aa12.89□□□□□ -0.35
PNKP-207ENST00000596014 TM2D2Q9BX73 214 aa12.89□□□□□ -0.35
PNKP-207ENST00000596014 CYSLTR1Q9Y271 337 aa12.89□□□□□ -0.35
PNKP-207ENST00000596014 TRAV12-1A0A0B4J245 112 aa12.88□□□□□ -0.35
PNKP-207ENST00000596014 LINC01549A6NIU2 74 aa12.88□□□□□ -0.35
PNKP-207ENST00000596014 PSCAO43653 123 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms