RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.64□□□□□ -1.03
SHKBP1-208ENST00000595726 IGKV2-29A2NJV5 120 aaPredicted RBP8.64□□□□□ -1.03
SHKBP1-208ENST00000595726 I3L3M4 83 aa8.64□□□□□ -1.03
SHKBP1-208ENST00000595726 TRAV8-4A0A0B4J246 113 aa8.63□□□□□ -1.03
SHKBP1-208ENST00000595726 SMKR1H3BMG3 65 aa8.63□□□□□ -1.03
SHKBP1-208ENST00000595726 PMCHP20382 165 aa8.63□□□□□ -1.03
SHKBP1-208ENST00000595726 ST20Q9HBF5 79 aa8.63□□□□□ -1.03
SHKBP1-208ENST00000595726 H7C423 109 aa8.62□□□□□ -1.03
SHKBP1-208ENST00000595726 TSHBP01222 138 aa8.62□□□□□ -1.03
SHKBP1-208ENST00000595726 POLR2KP53803 58 aaKnown RBP8.62□□□□□ -1.03
SHKBP1-208ENST00000595726 RAB14P61106 215 aa8.62□□□□□ -1.03
SHKBP1-208ENST00000595726 TMEM242Q9NWH2 141 aa8.62□□□□□ -1.03
SHKBP1-208ENST00000595726 TRBV27A0A0K0K1C4 114 aa8.61□□□□□ -1.03
SHKBP1-208ENST00000595726 FGF6P10767 208 aa8.61□□□□□ -1.03
SHKBP1-208ENST00000595726 CAMPP49913 170 aa8.61□□□□□ -1.03
SHKBP1-208ENST00000595726 FAM104BQ5XKR9 115 aa8.61□□□□□ -1.03
SHKBP1-208ENST00000595726 AMMECR1LQ6DCA0 310 aa8.61□□□□□ -1.03
SHKBP1-208ENST00000595726 NRACQ8N912 160 aa8.61□□□□□ -1.03
SHKBP1-208ENST00000595726 A0A1B0GW15 77 aa8.6□□□□□ -1.03
SHKBP1-208ENST00000595726 ESDP10768 282 aa8.6□□□□□ -1.03
SHKBP1-208ENST00000595726 PRR3P79522 188 aaKnown RBP8.6□□□□□ -1.03
SHKBP1-208ENST00000595726 IFITM2Q01629 132 aa8.6□□□□□ -1.03
SHKBP1-208ENST00000595726 MRPL51Q4U2R6 128 aaKnown RBP8.6□□□□□ -1.03
SHKBP1-208ENST00000595726 CLLU1Q5K131 121 aa8.6□□□□□ -1.03
SHKBP1-208ENST00000595726 RNASEKQ6P5S7 137 aaKnown RBP8.6□□□□□ -1.03
SHKBP1-208ENST00000595726 SPACA4Q8TDM5 124 aa8.6□□□□□ -1.03
SHKBP1-208ENST00000595726 C7orf33Q8WU49 177 aa8.6□□□□□ -1.03
SHKBP1-208ENST00000595726 A0A1B0GXF2 115 aa8.59□□□□□ -1.03
SHKBP1-208ENST00000595726 PPP1R17O96001 155 aa8.59□□□□□ -1.03
SHKBP1-208ENST00000595726 SLPIP03973 132 aa8.59□□□□□ -1.03
SHKBP1-208ENST00000595726 ZNF25P17030 456 aaPredicted RBP8.59□□□□□ -1.03
SHKBP1-208ENST00000595726 HBBP68871 147 aa8.59□□□□□ -1.03
SHKBP1-208ENST00000595726 MRPL54Q6P161 138 aaKnown RBP8.59□□□□□ -1.03
SHKBP1-208ENST00000595726 PLAC8Q9NZF1 115 aa8.59□□□□□ -1.03
SHKBP1-208ENST00000595726 IGKV3OR2-268A0A0C4DH90 116 aa8.58□□□□□ -1.04
SHKBP1-208ENST00000595726 SUMO2P61956 95 aaKnown RBP8.58□□□□□ -1.04
SHKBP1-208ENST00000595726 PNRC1Q12796 327 aaPredicted RBP8.58□□□□□ -1.04
SHKBP1-208ENST00000595726 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
SHKBP1-208ENST00000595726 C7orf77A4D0Y5 90 aa8.57□□□□□ -1.04
SHKBP1-208ENST00000595726 LINC00862A6NCI5 91 aa8.57□□□□□ -1.04
SHKBP1-208ENST00000595726 VCYO14598 125 aa8.57□□□□□ -1.04
SHKBP1-208ENST00000595726 PPP1R2P9O14990 202 aa8.57□□□□□ -1.04
SHKBP1-208ENST00000595726 S100A8P05109 93 aa8.57□□□□□ -1.04
SHKBP1-208ENST00000595726 MRPL52Q86TS9 123 aaKnown RBP8.57□□□□□ -1.04
SHKBP1-208ENST00000595726 CLRN3Q8NCR9 226 aa8.57□□□□□ -1.04
SHKBP1-208ENST00000595726 BTF3L4Q96K17 158 aa8.57□□□□□ -1.04
SHKBP1-208ENST00000595726 hDV102S1A0JD36 115 aa8.56□□□□□ -1.04
SHKBP1-208ENST00000595726 GAGE12HA6NDE8 117 aa8.56□□□□□ -1.04
SHKBP1-208ENST00000595726 FCER1GP30273 86 aa8.56□□□□□ -1.04
SHKBP1-208ENST00000595726 CKS2P33552 79 aa8.56□□□□□ -1.04
SHKBP1-208ENST00000595726 CNBPP62633 177 aaKnown RBP8.56□□□□□ -1.04
SHKBP1-208ENST00000595726 REG3GQ6UW15 175 aa8.56□□□□□ -1.04
SHKBP1-208ENST00000595726 ATP5L2Q7Z4Y8 100 aa8.56□□□□□ -1.04
SHKBP1-208ENST00000595726 OR5A1Q8NGJ0 315 aa8.56□□□□□ -1.04
SHKBP1-208ENST00000595726 TMEM101Q96IK0 257 aa8.56□□□□□ -1.04
SHKBP1-208ENST00000595726 TRBV24-1A0A075B6N3 115 aa8.55□□□□□ -1.04
SHKBP1-208ENST00000595726 D6R8Y8 96 aa8.55□□□□□ -1.04
SHKBP1-208ENST00000595726 F8W036 122 aa8.55□□□□□ -1.04
SHKBP1-208ENST00000595726 NDUFA5Q16718 116 aa8.55□□□□□ -1.04
SHKBP1-208ENST00000595726 SPINK6Q6UWN8 80 aa8.55□□□□□ -1.04
SHKBP1-208ENST00000595726 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
SHKBP1-208ENST00000595726 CHCHD10Q8WYQ3 142 aaPredicted RBP8.55□□□□□ -1.04
SHKBP1-208ENST00000595726 KIR2DL4Q99706 377 aa8.55□□□□□ -1.04
SHKBP1-208ENST00000595726 C20orf78Q9BR46 151 aa8.55□□□□□ -1.04
SHKBP1-208ENST00000595726 FSIP2Q5CZC0 6907 aa8.54□□□□□ -1.04
SHKBP1-208ENST00000595726 TNFRSF6BO95407 300 aa8.54□□□□□ -1.04
SHKBP1-208ENST00000595726 RPL32P62910 135 aaKnown RBP8.54□□□□□ -1.04
SHKBP1-208ENST00000595726 LCE2AQ5TA79 106 aaPredicted RBP8.54□□□□□ -1.04
SHKBP1-208ENST00000595726 ANAPC16Q96DE5 110 aa8.54□□□□□ -1.04
SHKBP1-208ENST00000595726 CDC42SE2Q9NRR3 84 aa8.54□□□□□ -1.04
SHKBP1-208ENST00000595726 LINC00959A0A1B0GUT2 108 aa8.53□□□□□ -1.04
SHKBP1-208ENST00000595726 NPYP01303 97 aa8.53□□□□□ -1.04
SHKBP1-208ENST00000595726 MT-ND4LP03901 98 aa8.53□□□□□ -1.04
SHKBP1-208ENST00000595726 ADCYAP1P18509 176 aa8.53□□□□□ -1.04
SHKBP1-208ENST00000595726 SRSF9Q13242 221 aaKnown RBP eCLIP8.53□□□□□ -1.04
SHKBP1-208ENST00000595726 SMIM2Q9BVW6 85 aa8.53□□□□□ -1.04
SHKBP1-208ENST00000595726 UBE2D4Q9Y2X8 147 aa8.53□□□□□ -1.04
SHKBP1-208ENST00000595726 PPBPP02775 128 aa8.52□□□□□ -1.05
SHKBP1-208ENST00000595726 COX6A2Q02221 97 aa8.52□□□□□ -1.05
SHKBP1-208ENST00000595726 FOXI1Q12951 378 aa8.52□□□□□ -1.05
SHKBP1-208ENST00000595726 MAJINQ3KP22 176 aa8.52□□□□□ -1.05
SHKBP1-208ENST00000595726 UQCC3Q6UW78 93 aa8.52□□□□□ -1.05
SHKBP1-208ENST00000595726 ZNF664Q8N3J9 261 aa8.52□□□□□ -1.05
SHKBP1-208ENST00000595726 CSDC2Q9Y534 153 aaKnown RBP8.52□□□□□ -1.05
SHKBP1-208ENST00000595726 IGKV2-24A0A0C4DH68 120 aa8.51□□□□□ -1.05
SHKBP1-208ENST00000595726 CCL25O15444 150 aa8.51□□□□□ -1.05
SHKBP1-208ENST00000595726 XCL1P47992 114 aa8.51□□□□□ -1.05
SHKBP1-208ENST00000595726 ORMDL3Q8N138 153 aa8.51□□□□□ -1.05
SHKBP1-208ENST00000595726 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
SHKBP1-208ENST00000595726 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.5□□□□□ -1.05
SHKBP1-208ENST00000595726 A0A0U1RQV1 116 aa8.5□□□□□ -1.05
SHKBP1-208ENST00000595726 TCAPO15273 167 aa8.5□□□□□ -1.05
SHKBP1-208ENST00000595726 HIGD2BQ4VC39 106 aa8.5□□□□□ -1.05
SHKBP1-208ENST00000595726 CFAP161Q6P656 301 aa8.5□□□□□ -1.05
SHKBP1-208ENST00000595726 STPG4Q8N801 248 aa8.5□□□□□ -1.05
SHKBP1-208ENST00000595726 PRSS3P2Q8NHM4 247 aa8.5□□□□□ -1.05
SHKBP1-208ENST00000595726 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
SHKBP1-208ENST00000595726 TMEM218A2RU14 115 aa8.49□□□□□ -1.05
SHKBP1-208ENST00000595726 SMAGPQ0VAQ4 97 aa8.49□□□□□ -1.05
SHKBP1-208ENST00000595726 SS18Q15532 418 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms