RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 OPRPNQ99935 248 aaPredicted RBP10.43□□□□□ -0.74
GTF2F1-202ENST00000593678 OR5A1Q8NGJ0 315 aa10.42□□□□□ -0.74
GTF2F1-202ENST00000593678 NANOS2P60321 138 aaKnown RBP10.41□□□□□ -0.74
GTF2F1-202ENST00000593678 MRPL52Q86TS9 123 aaKnown RBP10.41□□□□□ -0.74
GTF2F1-202ENST00000593678 TENM3Q9P273 2699 aa10.41□□□□□ -0.74
GTF2F1-202ENST00000593678 MRPS36P82909 103 aaKnown RBP10.41□□□□□ -0.74
GTF2F1-202ENST00000593678 B9D2Q9BPU9 175 aa10.41□□□□□ -0.74
GTF2F1-202ENST00000593678 CSDC2Q9Y534 153 aaKnown RBP10.41□□□□□ -0.74
GTF2F1-202ENST00000593678 DEFB131BA0A096LNP1 70 aa10.4□□□□□ -0.74
GTF2F1-202ENST00000593678 H3BNG1 76 aa10.4□□□□□ -0.74
GTF2F1-202ENST00000593678 ZNF25P17030 456 aaPredicted RBP10.4□□□□□ -0.74
GTF2F1-202ENST00000593678 ZC2HC1BQ5TFG8 222 aa10.4□□□□□ -0.74
GTF2F1-202ENST00000593678 STPG4Q8N801 248 aa10.4□□□□□ -0.74
GTF2F1-202ENST00000593678 GAGE6Q13070 117 aa10.39□□□□□ -0.75
GTF2F1-202ENST00000593678 Q6ZUT4 128 aa10.39□□□□□ -0.75
GTF2F1-202ENST00000593678 DDTP30046 118 aa10.38□□□□□ -0.75
GTF2F1-202ENST00000593678 RNASE13Q5GAN3 156 aaKnown RBP10.38□□□□□ -0.75
GTF2F1-202ENST00000593678 AMELXQ99217 191 aa10.38□□□□□ -0.75
GTF2F1-202ENST00000593678 UQCR10Q9UDW1 63 aa10.38□□□□□ -0.75
GTF2F1-202ENST00000593678 TMEM262E9PQX1 116 aa10.38□□□□□ -0.75
GTF2F1-202ENST00000593678 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
GTF2F1-202ENST00000593678 TCTAP57738 103 aa10.37□□□□□ -0.75
GTF2F1-202ENST00000593678 HERVK_113P61574 105 aa10.37□□□□□ -0.75
GTF2F1-202ENST00000593678 C14orf144Q96I85 54 aa10.37□□□□□ -0.75
GTF2F1-202ENST00000593678 MIEN1Q9BRT3 115 aa10.37□□□□□ -0.75
GTF2F1-202ENST00000593678 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
GTF2F1-202ENST00000593678 IGLV4-69A0A075B6H9 119 aa10.36□□□□□ -0.75
GTF2F1-202ENST00000593678 IGLC3P0DOY3 106 aa10.36□□□□□ -0.75
GTF2F1-202ENST00000593678 NMUP48645 174 aa10.36□□□□□ -0.75
GTF2F1-202ENST00000593678 TMEM170BQ5T4T1 132 aa10.36□□□□□ -0.75
GTF2F1-202ENST00000593678 C11orf86A6NJI1 115 aa10.36□□□□□ -0.75
GTF2F1-202ENST00000593678 ANKRD39Q53RE8 183 aa10.36□□□□□ -0.75
GTF2F1-202ENST00000593678 CDC42SE2Q9NRR3 84 aa10.36□□□□□ -0.75
GTF2F1-202ENST00000593678 NHLRC4P0CG21 123 aaPredicted RBP10.35□□□□□ -0.75
GTF2F1-202ENST00000593678 SEC11AP67812 179 aa10.35□□□□□ -0.75
GTF2F1-202ENST00000593678 SLC25A34Q6PIV7 304 aa10.35□□□□□ -0.75
GTF2F1-202ENST00000593678 NFE4Q86UQ8 179 aa10.35□□□□□ -0.75
GTF2F1-202ENST00000593678 GEMIN7Q9H840 131 aaKnown RBP10.35□□□□□ -0.75
GTF2F1-202ENST00000593678 A0A0J9YXV3 536 aa10.34□□□□□ -0.75
GTF2F1-202ENST00000593678 LELP1Q5T871 98 aa10.34□□□□□ -0.75
GTF2F1-202ENST00000593678 FAM104AQ969W3 186 aa10.34□□□□□ -0.75
GTF2F1-202ENST00000593678 TRAV8-6A0A0B4J262 113 aa10.33□□□□□ -0.76
GTF2F1-202ENST00000593678 TINCRA0A1B0GVN0 87 aa10.33□□□□□ -0.76
GTF2F1-202ENST00000593678 COX8AP10176 69 aa10.33□□□□□ -0.76
GTF2F1-202ENST00000593678 HNRNPA3P51991 378 aaKnown RBP10.33□□□□□ -0.76
GTF2F1-202ENST00000593678 TRAV13-1A0A0B4J241 112 aa10.32□□□□□ -0.76
GTF2F1-202ENST00000593678 A0A1B0GUV1 79 aa10.32□□□□□ -0.76
GTF2F1-202ENST00000593678 UBE2D1P51668 147 aa10.32□□□□□ -0.76
GTF2F1-202ENST00000593678 DEFA6Q01524 100 aa10.32□□□□□ -0.76
GTF2F1-202ENST00000593678 TIRAPP58753 221 aa10.31□□□□□ -0.76
GTF2F1-202ENST00000593678 LYPD5Q6UWN5 251 aa10.31□□□□□ -0.76
GTF2F1-202ENST00000593678 C15orf53Q8NAA6 179 aa10.31□□□□□ -0.76
GTF2F1-202ENST00000593678 H3BRM9 83 aa10.3□□□□□ -0.76
GTF2F1-202ENST00000593678 RBX1P62877 108 aa10.3□□□□□ -0.76
GTF2F1-202ENST00000593678 HERVK_113P63121 156 aa10.3□□□□□ -0.76
GTF2F1-202ENST00000593678 MPV17L2Q567V2 206 aa10.3□□□□□ -0.76
GTF2F1-202ENST00000593678 LINC00469Q8N7U9 141 aa10.3□□□□□ -0.76
GTF2F1-202ENST00000593678 IGLV4-60A0A075B6I1 120 aa10.3□□□□□ -0.76
GTF2F1-202ENST00000593678 IGKV3OR2-268A0A0C4DH90 116 aa10.3□□□□□ -0.76
GTF2F1-202ENST00000593678 E9PLD3 99 aa10.3□□□□□ -0.76
GTF2F1-202ENST00000593678 ZNF22P17026 224 aaPredicted RBP10.3□□□□□ -0.76
GTF2F1-202ENST00000593678 LINC00587B1AMM8 73 aa10.29□□□□□ -0.76
GTF2F1-202ENST00000593678 IGKV2D-26A0A0A0MRZ7 120 aa10.28□□□□□ -0.76
GTF2F1-202ENST00000593678 DNHD1Q96M86 4753 aa10.28□□□□□ -0.76
GTF2F1-202ENST00000593678 TMEM223A0PJW6 202 aa10.27□□□□□ -0.76
GTF2F1-202ENST00000593678 ANGP03950 147 aaKnown RBP10.27□□□□□ -0.76
GTF2F1-202ENST00000593678 PCP2Q8IVA1 136 aa10.27□□□□□ -0.76
GTF2F1-202ENST00000593678 BOD1L2Q8IYS8 172 aa10.27□□□□□ -0.76
GTF2F1-202ENST00000593678 DLEU1O43261 78 aa10.27□□□□□ -0.77
GTF2F1-202ENST00000593678 LINC00242Q5T6M2 205 aa10.27□□□□□ -0.77
GTF2F1-202ENST00000593678 FAM19A3Q7Z5A8 133 aa10.27□□□□□ -0.77
GTF2F1-202ENST00000593678 STAB2Q8WWQ8 2551 aa10.26□□□□□ -0.77
GTF2F1-202ENST00000593678 LGALS3P17931 250 aaKnown RBP10.26□□□□□ -0.77
GTF2F1-202ENST00000593678 SS18Q15532 418 aa10.26□□□□□ -0.77
GTF2F1-202ENST00000593678 IGLL5B9A064 214 aa10.25□□□□□ -0.77
GTF2F1-202ENST00000593678 PLEKHB2Q96CS7 222 aa10.25□□□□□ -0.77
GTF2F1-202ENST00000593678 MRPS16Q9Y3D3 137 aaKnown RBP10.25□□□□□ -0.77
GTF2F1-202ENST00000593678 IGHV3-64A0A075B6Q5 118 aa10.24□□□□□ -0.77
GTF2F1-202ENST00000593678 LEPROTO15243 131 aa10.24□□□□□ -0.77
GTF2F1-202ENST00000593678 CCL25O15444 150 aa10.24□□□□□ -0.77
GTF2F1-202ENST00000593678 CTAG1AP78358 180 aa10.24□□□□□ -0.77
GTF2F1-202ENST00000593678 HUWE1Q7Z6Z7 4374 aaKnown RBP10.24□□□□□ -0.77
GTF2F1-202ENST00000593678 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
GTF2F1-202ENST00000593678 ESRGQ1W209 222 aa10.24□□□□□ -0.77
GTF2F1-202ENST00000593678 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
GTF2F1-202ENST00000593678 TP73-AS1Q9UF72 201 aa10.24□□□□□ -0.77
GTF2F1-202ENST00000593678 CDKN2A-AS1Q9UH64 79 aa10.24□□□□□ -0.77
GTF2F1-202ENST00000593678 MYMXA0A1B0GTQ4 84 aa10.23□□□□□ -0.77
GTF2F1-202ENST00000593678 LINC00959A0A1B0GUT2 108 aa10.23□□□□□ -0.77
GTF2F1-202ENST00000593678 ZNF815PA8K554 130 aa10.23□□□□□ -0.77
GTF2F1-202ENST00000593678 J3QQQ9 107 aa10.23□□□□□ -0.77
GTF2F1-202ENST00000593678 SIVA1O15304 175 aa10.23□□□□□ -0.77
GTF2F1-202ENST00000593678 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
GTF2F1-202ENST00000593678 REG3AQ06141 175 aa10.23□□□□□ -0.77
GTF2F1-202ENST00000593678 CLPSL2Q6UWE3 100 aa10.23□□□□□ -0.77
GTF2F1-202ENST00000593678 TTTY13Q9BZ97 58 aa10.23□□□□□ -0.77
GTF2F1-202ENST00000593678 COL7A1Q02388 2944 aa10.23□□□□□ -0.77
GTF2F1-202ENST00000593678 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
GTF2F1-202ENST00000593678 CCL18P55774 89 aa10.22□□□□□ -0.77
GTF2F1-202ENST00000593678 COX6A2Q02221 97 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms