RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 NPSP0C0P6 89 aa8.21□□□□□ -1.1
DDX39A-219ENST00000592927 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.1
DDX39A-219ENST00000592927 PYY3Q5JQD4 70 aa8.21□□□□□ -1.1
DDX39A-219ENST00000592927 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.1
DDX39A-219ENST00000592927 TMEM141Q96I45 108 aa8.21□□□□□ -1.1
DDX39A-219ENST00000592927 SCGB3A1Q96QR1 104 aa8.21□□□□□ -1.1
DDX39A-219ENST00000592927 TIMM17AQ99595 171 aa8.21□□□□□ -1.1
DDX39A-219ENST00000592927 C20orf202A1L168 122 aa8.2□□□□□ -1.1
DDX39A-219ENST00000592927 H7C423 109 aa8.2□□□□□ -1.1
DDX39A-219ENST00000592927 SCGB1D1O95968 90 aa8.2□□□□□ -1.1
DDX39A-219ENST00000592927 CCL18P55774 89 aa8.2□□□□□ -1.1
DDX39A-219ENST00000592927 Q6ZN92 141 aa8.2□□□□□ -1.1
DDX39A-219ENST00000592927 UBE2DNLQ8IWF7 75 aa8.2□□□□□ -1.1
DDX39A-219ENST00000592927 ATP6V0E2Q8NHE4 81 aa8.2□□□□□ -1.1
DDX39A-219ENST00000592927 CHCHD7Q9BUK0 85 aa8.2□□□□□ -1.1
DDX39A-219ENST00000592927 PYGO1Q9Y3Y4 419 aa8.2□□□□□ -1.1
DDX39A-219ENST00000592927 TRBV25-1A0A075B6N4 114 aa8.19□□□□□ -1.1
DDX39A-219ENST00000592927 IGIPA6NJ69 53 aa8.19□□□□□ -1.1
DDX39A-219ENST00000592927 MAPKAPK5-AS1Q8N8E1 139 aa8.19□□□□□ -1.1
DDX39A-219ENST00000592927 SPANXA1Q9NS26 97 aa8.19□□□□□ -1.1
DDX39A-219ENST00000592927 TRBV6-8A0A0A6YYG3 113 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 TRAV12-1A0A0B4J245 112 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 PRSS29PA6NIE9 313 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 PRSS1P07477 247 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 RPL39P62891 51 aaKnown RBP8.18□□□□□ -1.1
DDX39A-219ENST00000592927 ESRGQ1W209 222 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 PAPPA-AS1Q5QFB9 102 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 NTM-AS1Q6ZSK4 140 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 LINC00518Q8N0U6 118 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 DEFB104AQ8WTQ1 72 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 TMEM243Q9BU79 118 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 TIMM21Q9BVV7 248 aa8.18□□□□□ -1.1
DDX39A-219ENST00000592927 LINC01545Q5VT33 79 aa8.17□□□□□ -1.1
DDX39A-219ENST00000592927 Q8N976 141 aa8.17□□□□□ -1.1
DDX39A-219ENST00000592927 UBE2L6O14933 153 aa8.16□□□□□ -1.1
DDX39A-219ENST00000592927 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
DDX39A-219ENST00000592927 MRPL52Q86TS9 123 aaKnown RBP8.16□□□□□ -1.1
DDX39A-219ENST00000592927 BAALCQ8WXS3 180 aa8.16□□□□□ -1.1
DDX39A-219ENST00000592927 C12orf57Q99622 126 aa8.16□□□□□ -1.1
DDX39A-219ENST00000592927 UBE2D4Q9Y2X8 147 aa8.16□□□□□ -1.1
DDX39A-219ENST00000592927 LINC00588Q9Y4M8 146 aa8.16□□□□□ -1.1
DDX39A-219ENST00000592927 CSDC2Q9Y534 153 aaKnown RBP8.16□□□□□ -1.1
DDX39A-219ENST00000592927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.15□□□□□ -1.1
DDX39A-219ENST00000592927 A0A087WX48 190 aa8.15□□□□□ -1.1
DDX39A-219ENST00000592927 IGKV2-29A2NJV5 120 aaPredicted RBP8.15□□□□□ -1.1
DDX39A-219ENST00000592927 H0Y8G0 127 aa8.15□□□□□ -1.1
DDX39A-219ENST00000592927 ZNF25P17030 456 aaPredicted RBP8.15□□□□□ -1.1
DDX39A-219ENST00000592927 TIRAPP58753 221 aa8.15□□□□□ -1.1
DDX39A-219ENST00000592927 S100A12P80511 92 aa8.15□□□□□ -1.1
DDX39A-219ENST00000592927 MRPS36P82909 103 aaKnown RBP8.15□□□□□ -1.1
DDX39A-219ENST00000592927 TEX43Q6ZNM6 134 aa8.15□□□□□ -1.1
DDX39A-219ENST00000592927 IGLV4-3A0A075B6K6 122 aa8.14□□□□□ -1.11
DDX39A-219ENST00000592927 PKIAP61925 76 aa8.14□□□□□ -1.11
DDX39A-219ENST00000592927 ODF1Q14990 250 aa8.14□□□□□ -1.11
DDX39A-219ENST00000592927 PMVKQ15126 192 aa8.14□□□□□ -1.11
DDX39A-219ENST00000592927 DGAT2L7PQ6IED9 249 aa8.14□□□□□ -1.11
DDX39A-219ENST00000592927 MRPS16Q9Y3D3 137 aaKnown RBP8.14□□□□□ -1.11
DDX39A-219ENST00000592927 FGF6P10767 208 aa8.13□□□□□ -1.11
DDX39A-219ENST00000592927 LELP1Q5T871 98 aa8.13□□□□□ -1.11
DDX39A-219ENST00000592927 AMMECR1LQ6DCA0 310 aa8.13□□□□□ -1.11
DDX39A-219ENST00000592927 TMEM101Q96IK0 257 aa8.13□□□□□ -1.11
DDX39A-219ENST00000592927 CHCHD5Q9BSY4 110 aa8.13□□□□□ -1.11
DDX39A-219ENST00000592927 VCX2Q9H322 139 aa8.13□□□□□ -1.11
DDX39A-219ENST00000592927 F8VRH5 84 aa8.12□□□□□ -1.11
DDX39A-219ENST00000592927 RTL8CO15255 209 aa8.12□□□□□ -1.11
DDX39A-219ENST00000592927 DPM2O94777 84 aa8.12□□□□□ -1.11
DDX39A-219ENST00000592927 Q8N1X5 172 aa8.12□□□□□ -1.11
DDX39A-219ENST00000592927 OR5A1Q8NGJ0 315 aa8.12□□□□□ -1.11
DDX39A-219ENST00000592927 AMELXQ99217 191 aa8.12□□□□□ -1.11
DDX39A-219ENST00000592927 UPK3BQ9BT76 320 aa8.12□□□□□ -1.11
DDX39A-219ENST00000592927 CST9LQ9H4G1 147 aa8.12□□□□□ -1.11
DDX39A-219ENST00000592927 CHTOPQ9Y3Y2 248 aaKnown RBP8.12□□□□□ -1.11
DDX39A-219ENST00000592927 TRAV8-6A0A0B4J262 113 aa8.11□□□□□ -1.11
DDX39A-219ENST00000592927 PLNP26678 52 aa8.11□□□□□ -1.11
DDX39A-219ENST00000592927 C2orf88Q9BSF0 95 aa8.11□□□□□ -1.11
DDX39A-219ENST00000592927 VAMP8Q9BV40 100 aa8.11□□□□□ -1.11
DDX39A-219ENST00000592927 Q9H8V8 135 aa8.11□□□□□ -1.11
DDX39A-219ENST00000592927 A0A1B0GUV1 79 aa8.1□□□□□ -1.11
DDX39A-219ENST00000592927 CDK2AP2O75956 126 aa8.1□□□□□ -1.11
DDX39A-219ENST00000592927 IGKCP01834 107 aa8.1□□□□□ -1.11
DDX39A-219ENST00000592927 GAGE6Q13070 117 aa8.1□□□□□ -1.11
DDX39A-219ENST00000592927 CDPF1Q6NVV7 123 aa8.1□□□□□ -1.11
DDX39A-219ENST00000592927 ZNF664Q8N3J9 261 aa8.1□□□□□ -1.11
DDX39A-219ENST00000592927 FAM104AQ969W3 186 aa8.1□□□□□ -1.11
DDX39A-219ENST00000592927 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
DDX39A-219ENST00000592927 MRPL35Q9NZE8 188 aaKnown RBP8.1□□□□□ -1.11
DDX39A-219ENST00000592927 TRAV9-2A0A087WT02 112 aa8.09□□□□□ -1.11
DDX39A-219ENST00000592927 HSBP1L1C9JCN9 74 aa8.09□□□□□ -1.11
DDX39A-219ENST00000592927 SIVA1O15304 175 aa8.09□□□□□ -1.11
DDX39A-219ENST00000592927 Q6ZUT4 128 aa8.09□□□□□ -1.11
DDX39A-219ENST00000592927 OPRPNQ99935 248 aaPredicted RBP8.09□□□□□ -1.11
DDX39A-219ENST00000592927 PMCHL2Q9BQD1 86 aa8.09□□□□□ -1.11
DDX39A-219ENST00000592927 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
DDX39A-219ENST00000592927 WFDC10BQ8IUB3 73 aa8.08□□□□□ -1.12
DDX39A-219ENST00000592927 ATOH7Q8N100 152 aa8.08□□□□□ -1.12
DDX39A-219ENST00000592927 IGLC3P0DOY3 106 aa8.07□□□□□ -1.12
DDX39A-219ENST00000592927 SEC11AP67812 179 aa8.07□□□□□ -1.12
DDX39A-219ENST00000592927 FAM19A3Q7Z5A8 133 aa8.07□□□□□ -1.12
DDX39A-219ENST00000592927 NFE4Q86UQ8 179 aa8.07□□□□□ -1.12
DDX39A-219ENST00000592927 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms