RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	FAM74A3	Q4VXF1	159 aa		11.26	□□□□□ -0.61
CIRBP-238	ENST00000592412	FAM231D	Q6ZW35	169 aa		11.26	□□□□□ -0.61
CIRBP-238	ENST00000592412	LINC01551	Q86U37	167 aa		11.26	□□□□□ -0.61
CIRBP-238	ENST00000592412	SMDT1	Q9H4I9	107 aa		11.26	□□□□□ -0.61
CIRBP-238	ENST00000592412		H7C423	109 aa		11.25	□□□□□ -0.61
CIRBP-238	ENST00000592412	NCR2	O95944	276 aa		11.25	□□□□□ -0.61
CIRBP-238	ENST00000592412	FOXA3	P55318	350 aa	Predicted RBP	11.25	□□□□□ -0.61
CIRBP-238	ENST00000592412	TWIST1	Q15672	202 aa		11.25	□□□□□ -0.61
CIRBP-238	ENST00000592412	OR5A1	Q8NGJ0	315 aa		11.25	□□□□□ -0.61
CIRBP-238	ENST00000592412	CARD19	Q96LW7	228 aa		11.25	□□□□□ -0.61
CIRBP-238	ENST00000592412	FAM231B	A6NCW3	169 aa		11.24	□□□□□ -0.61
CIRBP-238	ENST00000592412	CCL25	O15444	150 aa		11.24	□□□□□ -0.61
CIRBP-238	ENST00000592412	APCS	P02743	223 aa		11.24	□□□□□ -0.61
CIRBP-238	ENST00000592412	TMEM241	Q24JQ0	296 aa		11.24	□□□□□ -0.61
CIRBP-238	ENST00000592412	IGHV1-58	A0A0C4DH39	117 aa		11.23	□□□□□ -0.61
CIRBP-238	ENST00000592412	LINC00959	A0A1B0GUT2	108 aa		11.23	□□□□□ -0.61
CIRBP-238	ENST00000592412	SDHAF1	A6NFY7	115 aa		11.23	□□□□□ -0.61
CIRBP-238	ENST00000592412		A8MWL6	223 aa		11.22	□□□□□ -0.61
CIRBP-238	ENST00000592412		A0A1W2PNN7	141 aa		11.21	□□□□□ -0.61
CIRBP-238	ENST00000592412	ZNF25	P17030	456 aa	Predicted RBP	11.21	□□□□□ -0.61
CIRBP-238	ENST00000592412	PTTG1IP	P53801	180 aa		11.21	□□□□□ -0.61
CIRBP-238	ENST00000592412	CT83	Q5H943	113 aa		11.21	□□□□□ -0.61
CIRBP-238	ENST00000592412	OSTC	Q9NRP0	149 aa		11.21	□□□□□ -0.61
CIRBP-238	ENST00000592412	NAT8	Q9UHE5	227 aa		11.21	□□□□□ -0.61
CIRBP-238	ENST00000592412	ESD	P10768	282 aa		11.2	□□□□□ -0.62
CIRBP-238	ENST00000592412	RPL23	P62829	140 aa	Known RBP	11.2	□□□□□ -0.62
CIRBP-238	ENST00000592412	SYCN	Q0VAF6	134 aa		11.2	□□□□□ -0.62
CIRBP-238	ENST00000592412	ADIRF	Q15847	76 aa		11.2	□□□□□ -0.62
CIRBP-238	ENST00000592412	PKIG	Q9Y2B9	76 aa		11.2	□□□□□ -0.62
CIRBP-238	ENST00000592412	IFITM2	Q01629	132 aa		11.19	□□□□□ -0.62
CIRBP-238	ENST00000592412	CLLU1	Q5K131	121 aa		11.19	□□□□□ -0.62
CIRBP-238	ENST00000592412	ISOC2	Q96AB3	205 aa		11.19	□□□□□ -0.62
CIRBP-238	ENST00000592412	TSHB	P01222	138 aa		11.18	□□□□□ -0.62
CIRBP-238	ENST00000592412	TSKU	Q8WUA8	353 aa		11.18	□□□□□ -0.62
CIRBP-238	ENST00000592412	PSORS1C2	Q9UIG4	136 aa		11.18	□□□□□ -0.62
CIRBP-238	ENST00000592412	TRBV6-5	A0A0K0K1A5	114 aa		11.17	□□□□□ -0.62
CIRBP-238	ENST00000592412		I3L3M4	83 aa		11.17	□□□□□ -0.62
CIRBP-238	ENST00000592412	CAMP	P49913	170 aa		11.17	□□□□□ -0.62
CIRBP-238	ENST00000592412	GAGE2B	Q13066	116 aa		11.17	□□□□□ -0.62
CIRBP-238	ENST00000592412	CD164L2	Q6UWJ8	174 aa		11.17	□□□□□ -0.62
CIRBP-238	ENST00000592412	BORCS7	Q96B45	105 aa		11.17	□□□□□ -0.62
CIRBP-238	ENST00000592412	CDC42SE2	Q9NRR3	84 aa		11.17	□□□□□ -0.62
CIRBP-238	ENST00000592412	ZNF561-AS1	K7EIQ3	104 aa		11.16	□□□□□ -0.62
CIRBP-238	ENST00000592412	TMEM101	Q96IK0	257 aa		11.16	□□□□□ -0.62
CIRBP-238	ENST00000592412	BTF3L4	Q96K17	158 aa		11.16	□□□□□ -0.62
CIRBP-238	ENST00000592412	TMEM242	Q9NWH2	141 aa		11.16	□□□□□ -0.62
CIRBP-238	ENST00000592412		V9GYV3	84 aa		11.16	□□□□□ -0.62
CIRBP-238	ENST00000592412	IGLV4-69	A0A075B6H9	119 aa		11.15	□□□□□ -0.62
CIRBP-238	ENST00000592412	LOC107984640	A0A0U1RRK4	108 aa		11.15	□□□□□ -0.62
CIRBP-238	ENST00000592412	HIGD1C	A8MV81	97 aa		11.15	□□□□□ -0.62
CIRBP-238	ENST00000592412	PMCH	P20382	165 aa		11.15	□□□□□ -0.62
CIRBP-238	ENST00000592412	SMIM15	Q7Z3B0	74 aa		11.15	□□□□□ -0.62
CIRBP-238	ENST00000592412	MRPL52	Q86TS9	123 aa	Known RBP	11.15	□□□□□ -0.62
CIRBP-238	ENST00000592412	SS18	Q15532	418 aa		11.14	□□□□□ -0.63
CIRBP-238	ENST00000592412	NUP35	Q8NFH5	326 aa		11.14	□□□□□ -0.63
CIRBP-238	ENST00000592412		A0A1B0GUT8	65 aa		11.13	□□□□□ -0.63
CIRBP-238	ENST00000592412	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.13	□□□□□ -0.63
CIRBP-238	ENST00000592412	C9orf116	Q5BN46	136 aa	Predicted RBP	11.13	□□□□□ -0.63
CIRBP-238	ENST00000592412	ZNF664	Q8N3J9	261 aa		11.13	□□□□□ -0.63
CIRBP-238	ENST00000592412	MRAP2	Q96G30	205 aa		11.13	□□□□□ -0.63
CIRBP-238	ENST00000592412	POLR2K	P53803	58 aa	Known RBP	11.11	□□□□□ -0.63
CIRBP-238	ENST00000592412	PHF5A	Q7RTV0	110 aa	Known RBP	11.11	□□□□□ -0.63
CIRBP-238	ENST00000592412	PRR26	Q8N8Z3	221 aa		11.11	□□□□□ -0.63
CIRBP-238	ENST00000592412	APOM	O95445	188 aa		11.1	□□□□□ -0.63
CIRBP-238	ENST00000592412	MT-ND6	P03923	174 aa		11.1	□□□□□ -0.63
CIRBP-238	ENST00000592412	C1orf137	Q5JT78	98 aa		11.1	□□□□□ -0.63
CIRBP-238	ENST00000592412	NAT8B	Q9UHF3	227 aa		11.1	□□□□□ -0.63
CIRBP-238	ENST00000592412	RIG	Q13278	110 aa		11.09	□□□□□ -0.63
CIRBP-238	ENST00000592412	CAMK2N2	Q96S95	79 aa		11.09	□□□□□ -0.63
CIRBP-238	ENST00000592412	ST20	Q9HBF5	79 aa		11.09	□□□□□ -0.63
CIRBP-238	ENST00000592412	TRBV27	A0A0K0K1C4	114 aa		11.08	□□□□□ -0.64
CIRBP-238	ENST00000592412	SMIM27	A0A1W2PRY6	76 aa		11.08	□□□□□ -0.64
CIRBP-238	ENST00000592412	C7orf77	A4D0Y5	90 aa		11.08	□□□□□ -0.64
CIRBP-238	ENST00000592412	COX7A2L	O14548	114 aa		11.08	□□□□□ -0.64
CIRBP-238	ENST00000592412	UQCC3	Q6UW78	93 aa		11.08	□□□□□ -0.64
CIRBP-238	ENST00000592412	KRTAP11-1	Q8IUC1	163 aa		11.08	□□□□□ -0.64
CIRBP-238	ENST00000592412	RPL18A	Q02543	176 aa	Known RBP	11.07	□□□□□ -0.64
CIRBP-238	ENST00000592412	PNRC1	Q12796	327 aa	Predicted RBP	11.07	□□□□□ -0.64
CIRBP-238	ENST00000592412	RNASE13	Q5GAN3	156 aa	Known RBP	11.07	□□□□□ -0.64
CIRBP-238	ENST00000592412	C2orf48	Q96LS8	159 aa		11.07	□□□□□ -0.64
CIRBP-238	ENST00000592412	OPRPN	Q99935	248 aa	Predicted RBP	11.07	□□□□□ -0.64
CIRBP-238	ENST00000592412	TMEM191A	Q9H0A3	160 aa		11.07	□□□□□ -0.64
CIRBP-238	ENST00000592412	C1orf196	B1AJZ1	125 aa		11.06	□□□□□ -0.64
CIRBP-238	ENST00000592412	MAL	P21145	153 aa		11.06	□□□□□ -0.64
CIRBP-238	ENST00000592412	PPP1R2P9	O14990	202 aa		11.05	□□□□□ -0.64
CIRBP-238	ENST00000592412	IGLV7-43	P04211	117 aa		11.05	□□□□□ -0.64
CIRBP-238	ENST00000592412	COMMD7	Q86VX2	200 aa		11.05	□□□□□ -0.64
CIRBP-238	ENST00000592412	UBE2D4	Q9Y2X8	147 aa		11.05	□□□□□ -0.64
CIRBP-238	ENST00000592412	RAB4A	P20338	218 aa		11.04	□□□□□ -0.64
CIRBP-238	ENST00000592412	C5orf38	Q86SI9	138 aa		11.04	□□□□□ -0.64
CIRBP-238	ENST00000592412	CSDC2	Q9Y534	153 aa	Known RBP	11.04	□□□□□ -0.64
CIRBP-238	ENST00000592412	TMEM218	A2RU14	115 aa		11.03	□□□□□ -0.64
CIRBP-238	ENST00000592412		F8W036	122 aa		11.03	□□□□□ -0.64
CIRBP-238	ENST00000592412	SMKR1	H3BMG3	65 aa		11.03	□□□□□ -0.64
CIRBP-238	ENST00000592412	MT-ND4L	P03901	98 aa		11.03	□□□□□ -0.64
CIRBP-238	ENST00000592412	KRTAP1-4	P0C5Y4	121 aa		11.03	□□□□□ -0.64
CIRBP-238	ENST00000592412	AMN1	Q8IY45	258 aa		11.03	□□□□□ -0.64
CIRBP-238	ENST00000592412	DIRC1	Q969H9	104 aa		11.03	□□□□□ -0.64
CIRBP-238	ENST00000592412	TRAV13-1	A0A0B4J241	112 aa		11.02	□□□□□ -0.65
CIRBP-238	ENST00000592412		A0A1B0GW15	77 aa		11.02	□□□□□ -0.65

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