RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 FAM74A3Q4VXF1 159 aa11.26□□□□□ -0.61
CIRBP-238ENST00000592412 FAM231DQ6ZW35 169 aa11.26□□□□□ -0.61
CIRBP-238ENST00000592412 LINC01551Q86U37 167 aa11.26□□□□□ -0.61
CIRBP-238ENST00000592412 SMDT1Q9H4I9 107 aa11.26□□□□□ -0.61
CIRBP-238ENST00000592412 H7C423 109 aa11.25□□□□□ -0.61
CIRBP-238ENST00000592412 NCR2O95944 276 aa11.25□□□□□ -0.61
CIRBP-238ENST00000592412 FOXA3P55318 350 aaPredicted RBP11.25□□□□□ -0.61
CIRBP-238ENST00000592412 TWIST1Q15672 202 aa11.25□□□□□ -0.61
CIRBP-238ENST00000592412 OR5A1Q8NGJ0 315 aa11.25□□□□□ -0.61
CIRBP-238ENST00000592412 CARD19Q96LW7 228 aa11.25□□□□□ -0.61
CIRBP-238ENST00000592412 FAM231BA6NCW3 169 aa11.24□□□□□ -0.61
CIRBP-238ENST00000592412 CCL25O15444 150 aa11.24□□□□□ -0.61
CIRBP-238ENST00000592412 APCSP02743 223 aa11.24□□□□□ -0.61
CIRBP-238ENST00000592412 TMEM241Q24JQ0 296 aa11.24□□□□□ -0.61
CIRBP-238ENST00000592412 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
CIRBP-238ENST00000592412 LINC00959A0A1B0GUT2 108 aa11.23□□□□□ -0.61
CIRBP-238ENST00000592412 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
CIRBP-238ENST00000592412 A8MWL6 223 aa11.22□□□□□ -0.61
CIRBP-238ENST00000592412 A0A1W2PNN7 141 aa11.21□□□□□ -0.61
CIRBP-238ENST00000592412 ZNF25P17030 456 aaPredicted RBP11.21□□□□□ -0.61
CIRBP-238ENST00000592412 PTTG1IPP53801 180 aa11.21□□□□□ -0.61
CIRBP-238ENST00000592412 CT83Q5H943 113 aa11.21□□□□□ -0.61
CIRBP-238ENST00000592412 OSTCQ9NRP0 149 aa11.21□□□□□ -0.61
CIRBP-238ENST00000592412 NAT8Q9UHE5 227 aa11.21□□□□□ -0.61
CIRBP-238ENST00000592412 ESDP10768 282 aa11.2□□□□□ -0.62
CIRBP-238ENST00000592412 RPL23P62829 140 aaKnown RBP11.2□□□□□ -0.62
CIRBP-238ENST00000592412 SYCNQ0VAF6 134 aa11.2□□□□□ -0.62
CIRBP-238ENST00000592412 ADIRFQ15847 76 aa11.2□□□□□ -0.62
CIRBP-238ENST00000592412 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
CIRBP-238ENST00000592412 IFITM2Q01629 132 aa11.19□□□□□ -0.62
CIRBP-238ENST00000592412 CLLU1Q5K131 121 aa11.19□□□□□ -0.62
CIRBP-238ENST00000592412 ISOC2Q96AB3 205 aa11.19□□□□□ -0.62
CIRBP-238ENST00000592412 TSHBP01222 138 aa11.18□□□□□ -0.62
CIRBP-238ENST00000592412 TSKUQ8WUA8 353 aa11.18□□□□□ -0.62
CIRBP-238ENST00000592412 PSORS1C2Q9UIG4 136 aa11.18□□□□□ -0.62
CIRBP-238ENST00000592412 TRBV6-5A0A0K0K1A5 114 aa11.17□□□□□ -0.62
CIRBP-238ENST00000592412 I3L3M4 83 aa11.17□□□□□ -0.62
CIRBP-238ENST00000592412 CAMPP49913 170 aa11.17□□□□□ -0.62
CIRBP-238ENST00000592412 GAGE2BQ13066 116 aa11.17□□□□□ -0.62
CIRBP-238ENST00000592412 CD164L2Q6UWJ8 174 aa11.17□□□□□ -0.62
CIRBP-238ENST00000592412 BORCS7Q96B45 105 aa11.17□□□□□ -0.62
CIRBP-238ENST00000592412 CDC42SE2Q9NRR3 84 aa11.17□□□□□ -0.62
CIRBP-238ENST00000592412 ZNF561-AS1K7EIQ3 104 aa11.16□□□□□ -0.62
CIRBP-238ENST00000592412 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
CIRBP-238ENST00000592412 BTF3L4Q96K17 158 aa11.16□□□□□ -0.62
CIRBP-238ENST00000592412 TMEM242Q9NWH2 141 aa11.16□□□□□ -0.62
CIRBP-238ENST00000592412 V9GYV3 84 aa11.16□□□□□ -0.62
CIRBP-238ENST00000592412 IGLV4-69A0A075B6H9 119 aa11.15□□□□□ -0.62
CIRBP-238ENST00000592412 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.62
CIRBP-238ENST00000592412 HIGD1CA8MV81 97 aa11.15□□□□□ -0.62
CIRBP-238ENST00000592412 PMCHP20382 165 aa11.15□□□□□ -0.62
CIRBP-238ENST00000592412 SMIM15Q7Z3B0 74 aa11.15□□□□□ -0.62
CIRBP-238ENST00000592412 MRPL52Q86TS9 123 aaKnown RBP11.15□□□□□ -0.62
CIRBP-238ENST00000592412 SS18Q15532 418 aa11.14□□□□□ -0.63
CIRBP-238ENST00000592412 NUP35Q8NFH5 326 aa11.14□□□□□ -0.63
CIRBP-238ENST00000592412 A0A1B0GUT8 65 aa11.13□□□□□ -0.63
CIRBP-238ENST00000592412 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.13□□□□□ -0.63
CIRBP-238ENST00000592412 C9orf116Q5BN46 136 aaPredicted RBP11.13□□□□□ -0.63
CIRBP-238ENST00000592412 ZNF664Q8N3J9 261 aa11.13□□□□□ -0.63
CIRBP-238ENST00000592412 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
CIRBP-238ENST00000592412 POLR2KP53803 58 aaKnown RBP11.11□□□□□ -0.63
CIRBP-238ENST00000592412 PHF5AQ7RTV0 110 aaKnown RBP11.11□□□□□ -0.63
CIRBP-238ENST00000592412 PRR26Q8N8Z3 221 aa11.11□□□□□ -0.63
CIRBP-238ENST00000592412 APOMO95445 188 aa11.1□□□□□ -0.63
CIRBP-238ENST00000592412 MT-ND6P03923 174 aa11.1□□□□□ -0.63
CIRBP-238ENST00000592412 C1orf137Q5JT78 98 aa11.1□□□□□ -0.63
CIRBP-238ENST00000592412 NAT8BQ9UHF3 227 aa11.1□□□□□ -0.63
CIRBP-238ENST00000592412 RIGQ13278 110 aa11.09□□□□□ -0.63
CIRBP-238ENST00000592412 CAMK2N2Q96S95 79 aa11.09□□□□□ -0.63
CIRBP-238ENST00000592412 ST20Q9HBF5 79 aa11.09□□□□□ -0.63
CIRBP-238ENST00000592412 TRBV27A0A0K0K1C4 114 aa11.08□□□□□ -0.64
CIRBP-238ENST00000592412 SMIM27A0A1W2PRY6 76 aa11.08□□□□□ -0.64
CIRBP-238ENST00000592412 C7orf77A4D0Y5 90 aa11.08□□□□□ -0.64
CIRBP-238ENST00000592412 COX7A2LO14548 114 aa11.08□□□□□ -0.64
CIRBP-238ENST00000592412 UQCC3Q6UW78 93 aa11.08□□□□□ -0.64
CIRBP-238ENST00000592412 KRTAP11-1Q8IUC1 163 aa11.08□□□□□ -0.64
CIRBP-238ENST00000592412 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
CIRBP-238ENST00000592412 PNRC1Q12796 327 aaPredicted RBP11.07□□□□□ -0.64
CIRBP-238ENST00000592412 RNASE13Q5GAN3 156 aaKnown RBP11.07□□□□□ -0.64
CIRBP-238ENST00000592412 C2orf48Q96LS8 159 aa11.07□□□□□ -0.64
CIRBP-238ENST00000592412 OPRPNQ99935 248 aaPredicted RBP11.07□□□□□ -0.64
CIRBP-238ENST00000592412 TMEM191AQ9H0A3 160 aa11.07□□□□□ -0.64
CIRBP-238ENST00000592412 C1orf196B1AJZ1 125 aa11.06□□□□□ -0.64
CIRBP-238ENST00000592412 MALP21145 153 aa11.06□□□□□ -0.64
CIRBP-238ENST00000592412 PPP1R2P9O14990 202 aa11.05□□□□□ -0.64
CIRBP-238ENST00000592412 IGLV7-43P04211 117 aa11.05□□□□□ -0.64
CIRBP-238ENST00000592412 COMMD7Q86VX2 200 aa11.05□□□□□ -0.64
CIRBP-238ENST00000592412 UBE2D4Q9Y2X8 147 aa11.05□□□□□ -0.64
CIRBP-238ENST00000592412 RAB4AP20338 218 aa11.04□□□□□ -0.64
CIRBP-238ENST00000592412 C5orf38Q86SI9 138 aa11.04□□□□□ -0.64
CIRBP-238ENST00000592412 CSDC2Q9Y534 153 aaKnown RBP11.04□□□□□ -0.64
CIRBP-238ENST00000592412 TMEM218A2RU14 115 aa11.03□□□□□ -0.64
CIRBP-238ENST00000592412 F8W036 122 aa11.03□□□□□ -0.64
CIRBP-238ENST00000592412 SMKR1H3BMG3 65 aa11.03□□□□□ -0.64
CIRBP-238ENST00000592412 MT-ND4LP03901 98 aa11.03□□□□□ -0.64
CIRBP-238ENST00000592412 KRTAP1-4P0C5Y4 121 aa11.03□□□□□ -0.64
CIRBP-238ENST00000592412 AMN1Q8IY45 258 aa11.03□□□□□ -0.64
CIRBP-238ENST00000592412 DIRC1Q969H9 104 aa11.03□□□□□ -0.64
CIRBP-238ENST00000592412 TRAV13-1A0A0B4J241 112 aa11.02□□□□□ -0.65
CIRBP-238ENST00000592412 A0A1B0GW15 77 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms