RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CFAP161Q6P656 301 aa6.62□□□□□ -1.35
BRCA1-227ENST00000591849 CLRN3Q8NCR9 226 aa6.62□□□□□ -1.35
BRCA1-227ENST00000591849 IMMP2LQ96T52 175 aa6.62□□□□□ -1.35
BRCA1-227ENST00000591849 AP5S1Q9NUS5 200 aa6.62□□□□□ -1.35
BRCA1-227ENST00000591849 TRBV24-1A0A075B6N3 115 aa6.61□□□□□ -1.35
BRCA1-227ENST00000591849 hDV102S1A0JD36 115 aa6.61□□□□□ -1.35
BRCA1-227ENST00000591849 NPYP01303 97 aa6.61□□□□□ -1.35
BRCA1-227ENST00000591849 ADCYAP1P18509 176 aa6.61□□□□□ -1.35
BRCA1-227ENST00000591849 ZNF664Q8N3J9 261 aa6.61□□□□□ -1.35
BRCA1-227ENST00000591849 CHCHD10Q8WYQ3 142 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-227ENST00000591849 SMIM2Q9BVW6 85 aa6.61□□□□□ -1.35
BRCA1-227ENST00000591849 KRTAP4-5Q9BYR2 181 aa6.61□□□□□ -1.35
BRCA1-227ENST00000591849 LOC389332A0A1B0GUA5 103 aa6.6□□□□□ -1.35
BRCA1-227ENST00000591849 RPL32P62910 135 aaKnown RBP6.6□□□□□ -1.35
BRCA1-227ENST00000591849 LINC01620Q4KN68 170 aa6.6□□□□□ -1.35
BRCA1-227ENST00000591849 MRPL52Q86TS9 123 aaKnown RBP6.6□□□□□ -1.35
BRCA1-227ENST00000591849 SLC7A5P1Q8MH63 180 aa6.6□□□□□ -1.35
BRCA1-227ENST00000591849 MAP1LC3AQ9H492 121 aa6.6□□□□□ -1.35
BRCA1-227ENST00000591849 RPS10P5Q9NQ39 176 aa6.6□□□□□ -1.35
BRCA1-227ENST00000591849 LINC00959A0A1B0GUT2 108 aa6.59□□□□□ -1.35
BRCA1-227ENST00000591849 PRSS1P07477 247 aa6.59□□□□□ -1.35
BRCA1-227ENST00000591849 XCL1P47992 114 aa6.59□□□□□ -1.35
BRCA1-227ENST00000591849 KRTAP26-1Q6PEX3 210 aa6.59□□□□□ -1.35
BRCA1-227ENST00000591849 Q8N1X5 172 aa6.59□□□□□ -1.35
BRCA1-227ENST00000591849 CDC42SE2Q9NRR3 84 aa6.59□□□□□ -1.35
BRCA1-227ENST00000591849 LAMTOR2Q9Y2Q5 125 aa6.59□□□□□ -1.35
BRCA1-227ENST00000591849 TRAV9-1A0A075B6T8 112 aa6.58□□□□□ -1.36
BRCA1-227ENST00000591849 CCL25O15444 150 aa6.58□□□□□ -1.36
BRCA1-227ENST00000591849 XGP55808 180 aa6.58□□□□□ -1.36
BRCA1-227ENST00000591849 HAMPP81172 84 aa6.58□□□□□ -1.36
BRCA1-227ENST00000591849 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-227ENST00000591849 TRAV13-1A0A0B4J241 112 aa6.57□□□□□ -1.36
BRCA1-227ENST00000591849 EPM2AB3EWF7 344 aa6.57□□□□□ -1.36
BRCA1-227ENST00000591849 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-227ENST00000591849 RHEBQ15382 184 aa6.57□□□□□ -1.36
BRCA1-227ENST00000591849 RNASE13Q5GAN3 156 aaKnown RBP6.57□□□□□ -1.36
BRCA1-227ENST00000591849 DPH3Q96FX2 82 aa6.57□□□□□ -1.36
BRCA1-227ENST00000591849 TIMM21Q9BVV7 248 aa6.57□□□□□ -1.36
BRCA1-227ENST00000591849 CARHSP1Q9Y2V2 147 aaKnown RBP6.57□□□□□ -1.36
BRCA1-227ENST00000591849 UBE2D4Q9Y2X8 147 aa6.57□□□□□ -1.36
BRCA1-227ENST00000591849 CSDC2Q9Y534 153 aaKnown RBP6.57□□□□□ -1.36
BRCA1-227ENST00000591849 LRP1BQ9NZR2 4599 aa6.57□□□□□ -1.36
BRCA1-227ENST00000591849 C1orf196B1AJZ1 125 aa6.56□□□□□ -1.36
BRCA1-227ENST00000591849 FAM229AH3BQW9 127 aa6.56□□□□□ -1.36
BRCA1-227ENST00000591849 APOC3P02656 99 aa6.56□□□□□ -1.36
BRCA1-227ENST00000591849 MALP21145 153 aa6.56□□□□□ -1.36
BRCA1-227ENST00000591849 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
BRCA1-227ENST00000591849 KIAA1644Q3SXP7 199 aa6.56□□□□□ -1.36
BRCA1-227ENST00000591849 COX19Q49B96 90 aa6.56□□□□□ -1.36
BRCA1-227ENST00000591849 HIGD2BQ4VC39 106 aa6.56□□□□□ -1.36
BRCA1-227ENST00000591849 SPANXA1Q9NS26 97 aa6.56□□□□□ -1.36
BRCA1-227ENST00000591849 FAM30AQ9NZY2 134 aa6.56□□□□□ -1.36
BRCA1-227ENST00000591849 DNAH5Q8TE73 4624 aa6.55□□□□□ -1.36
BRCA1-227ENST00000591849 IFI27P40305 119 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-227ENST00000591849 FOXI1Q12951 378 aa6.55□□□□□ -1.36
BRCA1-227ENST00000591849 C10orf91Q5T1B1 145 aa6.55□□□□□ -1.36
BRCA1-227ENST00000591849 CD164L2Q6UWJ8 174 aa6.55□□□□□ -1.36
BRCA1-227ENST00000591849 Q6ZUT4 128 aa6.55□□□□□ -1.36
BRCA1-227ENST00000591849 Q8N8P6 123 aa6.55□□□□□ -1.36
BRCA1-227ENST00000591849 NXT2Q9NPJ8 142 aaKnown RBP6.55□□□□□ -1.36
BRCA1-227ENST00000591849 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-227ENST00000591849 IGHV3-64A0A075B6Q5 118 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 IGHV1-58A0A0C4DH39 117 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 ZNF561-AS1K7EIQ3 104 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 SNAPINO95295 136 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 G0S2P27469 103 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 FABP9Q0Z7S8 132 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 ORMDL2Q53FV1 153 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 SVBPQ8N300 66 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 C9orf163Q8N9P6 203 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 GNB1LQ9BYB4 327 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
BRCA1-227ENST00000591849 IFITM10A6NMD0 228 aa6.53□□□□□ -1.36
BRCA1-227ENST00000591849 PRSS47A8MTI9 375 aa6.53□□□□□ -1.36
BRCA1-227ENST00000591849 COX7A2LO14548 114 aa6.53□□□□□ -1.36
BRCA1-227ENST00000591849 Q6ZN92 141 aa6.53□□□□□ -1.36
BRCA1-227ENST00000591849 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
BRCA1-227ENST00000591849 OPRPNQ99935 248 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-227ENST00000591849 APOBP04114 4563 aaKnown RBP6.53□□□□□ -1.36
BRCA1-227ENST00000591849 APOMO95445 188 aa6.52□□□□□ -1.37
BRCA1-227ENST00000591849 MT-ND6P03923 174 aa6.52□□□□□ -1.37
BRCA1-227ENST00000591849 CNBPP62633 177 aaKnown RBP6.52□□□□□ -1.37
BRCA1-227ENST00000591849 MRPS36P82909 103 aaKnown RBP6.52□□□□□ -1.37
BRCA1-227ENST00000591849 Q5VSD8 79 aa6.52□□□□□ -1.37
BRCA1-227ENST00000591849 C2orf66Q6UXQ4 117 aa6.52□□□□□ -1.37
BRCA1-227ENST00000591849 C5orf38Q86SI9 138 aa6.52□□□□□ -1.37
BRCA1-227ENST00000591849 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
BRCA1-227ENST00000591849 MRPL18Q9H0U6 180 aaKnown RBP6.52□□□□□ -1.37
BRCA1-227ENST00000591849 GVQW2A0A096LPI5 108 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-227ENST00000591849 K7EMI3 77 aa6.51□□□□□ -1.37
BRCA1-227ENST00000591849 TEX43Q6ZNM6 134 aa6.51□□□□□ -1.37
BRCA1-227ENST00000591849 Q6ZSA8 131 aa6.51□□□□□ -1.37
BRCA1-227ENST00000591849 SCXQ7RTU7 201 aa6.51□□□□□ -1.37
BRCA1-227ENST00000591849 TMEM141Q96I45 108 aa6.51□□□□□ -1.37
BRCA1-227ENST00000591849 C2orf88Q9BSF0 95 aa6.51□□□□□ -1.37
BRCA1-227ENST00000591849 VCX2Q9H322 139 aa6.51□□□□□ -1.37
BRCA1-227ENST00000591849 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
BRCA1-227ENST00000591849 TGIF2-C20orf24A0A0A6YYL0 155 aa6.5□□□□□ -1.37
BRCA1-227ENST00000591849 PLA2G1BP04054 148 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms