RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 GTSF1LQ9H1H1 148 aa6.61□□□□□ -1.35
VPS25-205ENST00000590339 TENM3Q9P273 2699 aa6.6□□□□□ -1.35
VPS25-205ENST00000590339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.6□□□□□ -1.35
VPS25-205ENST00000590339 TRGV4A0A0C4DH28 118 aa6.6□□□□□ -1.35
VPS25-205ENST00000590339 LOC100131303A0A0U1RQF7 123 aa6.6□□□□□ -1.35
VPS25-205ENST00000590339 IGKV2-29A2NJV5 120 aaPredicted RBP6.6□□□□□ -1.35
VPS25-205ENST00000590339 E9PLD3 99 aa6.6□□□□□ -1.35
VPS25-205ENST00000590339 SIVA1O15304 175 aa6.6□□□□□ -1.35
VPS25-205ENST00000590339 NMUP48645 174 aa6.6□□□□□ -1.35
VPS25-205ENST00000590339 EMP1P54849 157 aa6.6□□□□□ -1.35
VPS25-205ENST00000590339 FAM222AQ5U5X8 452 aa6.6□□□□□ -1.35
VPS25-205ENST00000590339 OPRPNQ99935 248 aaPredicted RBP6.6□□□□□ -1.35
VPS25-205ENST00000590339 Q6ZUT4 128 aa6.59□□□□□ -1.35
VPS25-205ENST00000590339 PRADC1Q9BSG0 188 aa6.59□□□□□ -1.35
VPS25-205ENST00000590339 CHAC1Q9BUX1 264 aa6.59□□□□□ -1.35
VPS25-205ENST00000590339 HIGD1BQ9P298 99 aa6.59□□□□□ -1.35
VPS25-205ENST00000590339 NBEAL2Q6ZNJ1 2754 aa6.59□□□□□ -1.35
VPS25-205ENST00000590339 RYR3Q15413 4870 aa6.59□□□□□ -1.35
VPS25-205ENST00000590339 DEFB130BP0DP73 79 aa6.58□□□□□ -1.36
VPS25-205ENST00000590339 DEFB130AP0DP74 79 aa6.58□□□□□ -1.36
VPS25-205ENST00000590339 TCTAP57738 103 aa6.58□□□□□ -1.36
VPS25-205ENST00000590339 CEMP1Q6PRD7 247 aaPredicted RBP6.58□□□□□ -1.36
VPS25-205ENST00000590339 CELA1Q9UNI1 258 aa6.58□□□□□ -1.36
VPS25-205ENST00000590339 CSDC2Q9Y534 153 aaKnown RBP6.58□□□□□ -1.36
VPS25-205ENST00000590339 A0A0J9YWU9 116 aa6.57□□□□□ -1.36
VPS25-205ENST00000590339 H7C423 109 aa6.57□□□□□ -1.36
VPS25-205ENST00000590339 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
VPS25-205ENST00000590339 HERVK_113P61574 105 aa6.57□□□□□ -1.36
VPS25-205ENST00000590339 TMEM97Q5BJF2 176 aa6.57□□□□□ -1.36
VPS25-205ENST00000590339 FAM19A3Q7Z5A8 133 aa6.57□□□□□ -1.36
VPS25-205ENST00000590339 TMEM243Q9BU79 118 aa6.57□□□□□ -1.36
VPS25-205ENST00000590339 TTTY13Q9BZ97 58 aa6.57□□□□□ -1.36
VPS25-205ENST00000590339 VCX2Q9H322 139 aa6.57□□□□□ -1.36
VPS25-205ENST00000590339 PRO0255Q9UI72 69 aa6.57□□□□□ -1.36
VPS25-205ENST00000590339 STAB2Q8WWQ8 2551 aa6.57□□□□□ -1.36
VPS25-205ENST00000590339 A0A0J9YXV3 536 aa6.56□□□□□ -1.36
VPS25-205ENST00000590339 LCE6AA0A183 80 aa6.56□□□□□ -1.36
VPS25-205ENST00000590339 TEX48A0A1B0GUV7 120 aa6.56□□□□□ -1.36
VPS25-205ENST00000590339 TMEM223A0PJW6 202 aa6.56□□□□□ -1.36
VPS25-205ENST00000590339 HINT1P49773 126 aaPredicted RBP6.56□□□□□ -1.36
VPS25-205ENST00000590339 HSD52Q0P140 79 aa6.56□□□□□ -1.36
VPS25-205ENST00000590339 SMAGPQ0VAQ4 97 aa6.56□□□□□ -1.36
VPS25-205ENST00000590339 MPV17L2Q567V2 206 aa6.56□□□□□ -1.36
VPS25-205ENST00000590339 BVES-AS1Q5T3Y7 98 aa6.56□□□□□ -1.36
VPS25-205ENST00000590339 MAPKAPK5-AS1Q8N8E1 139 aa6.56□□□□□ -1.36
VPS25-205ENST00000590339 TRBV25-1A0A075B6N4 114 aa6.55□□□□□ -1.36
VPS25-205ENST00000590339 IGLV5-45A0A087WSX0 123 aa6.55□□□□□ -1.36
VPS25-205ENST00000590339 TINCRA0A1B0GVN0 87 aa6.55□□□□□ -1.36
VPS25-205ENST00000590339 DEFB4AO15263 64 aa6.55□□□□□ -1.36
VPS25-205ENST00000590339 GYPEP15421 78 aa6.55□□□□□ -1.36
VPS25-205ENST00000590339 UBE2D1P51668 147 aa6.55□□□□□ -1.36
VPS25-205ENST00000590339 TSPEAR-AS2P59090 65 aa6.55□□□□□ -1.36
VPS25-205ENST00000590339 DAD1P61803 113 aa6.55□□□□□ -1.36
VPS25-205ENST00000590339 BATFQ16520 125 aa6.55□□□□□ -1.36
VPS25-205ENST00000590339 COL5A1-AS1Q5SY13 56 aa6.55□□□□□ -1.36
VPS25-205ENST00000590339 C11orf68Q9H3H3 251 aaKnown RBP6.55□□□□□ -1.36
VPS25-205ENST00000590339 TRBV6-8A0A0A6YYG3 113 aa6.54□□□□□ -1.36
VPS25-205ENST00000590339 TRAV8-6A0A0B4J262 113 aa6.54□□□□□ -1.36
VPS25-205ENST00000590339 MYMXA0A1B0GTQ4 84 aa6.54□□□□□ -1.36
VPS25-205ENST00000590339 A0A1B0GV90 55 aa6.54□□□□□ -1.36
VPS25-205ENST00000590339 ATP5G1P05496 136 aa6.54□□□□□ -1.36
VPS25-205ENST00000590339 SPART-AS1P0CW21 52 aa6.54□□□□□ -1.36
VPS25-205ENST00000590339 ZNF25P17030 456 aaPredicted RBP6.54□□□□□ -1.36
VPS25-205ENST00000590339 RNASE13Q5GAN3 156 aaKnown RBP6.54□□□□□ -1.36
VPS25-205ENST00000590339 TMEM170BQ5T4T1 132 aa6.54□□□□□ -1.36
VPS25-205ENST00000590339 VSIG2Q96IQ7 327 aa6.54□□□□□ -1.36
VPS25-205ENST00000590339 TENM2Q9NT68 2774 aa6.54□□□□□ -1.36
VPS25-205ENST00000590339 TRAV26-1A0A087WT03 109 aa6.53□□□□□ -1.36
VPS25-205ENST00000590339 LEPROTO15243 131 aa6.53□□□□□ -1.36
VPS25-205ENST00000590339 TIRAPP58753 221 aa6.53□□□□□ -1.36
VPS25-205ENST00000590339 ATP6V0E2Q8NHE4 81 aa6.53□□□□□ -1.36
VPS25-205ENST00000590339 CDC42SE2Q9NRR3 84 aa6.53□□□□□ -1.36
VPS25-205ENST00000590339 UBE2L6O14933 153 aa6.52□□□□□ -1.37
VPS25-205ENST00000590339 PAX4O43316 350 aa6.52□□□□□ -1.37
VPS25-205ENST00000590339 SEC11AP67812 179 aa6.52□□□□□ -1.37
VPS25-205ENST00000590339 TAL2Q16559 108 aa6.52□□□□□ -1.37
VPS25-205ENST00000590339 DGAT2L7PQ6IED9 249 aa6.52□□□□□ -1.37
VPS25-205ENST00000590339 OR5A1Q8NGJ0 315 aa6.52□□□□□ -1.37
VPS25-205ENST00000590339 ZNF815PA8K554 130 aa6.51□□□□□ -1.37
VPS25-205ENST00000590339 J3QQQ9 107 aa6.51□□□□□ -1.37
VPS25-205ENST00000590339 C12orf74Q32Q52 190 aa6.51□□□□□ -1.37
VPS25-205ENST00000590339 ORAOV1Q8WV07 137 aa6.51□□□□□ -1.37
VPS25-205ENST00000590339 PLEKHB2Q96CS7 222 aa6.51□□□□□ -1.37
VPS25-205ENST00000590339 RYR2Q92736 4967 aa6.51□□□□□ -1.37
VPS25-205ENST00000590339 LY6G6CO95867 125 aa6.5□□□□□ -1.37
VPS25-205ENST00000590339 HERVK_113P63121 156 aa6.5□□□□□ -1.37
VPS25-205ENST00000590339 GAGE6Q13070 117 aa6.5□□□□□ -1.37
VPS25-205ENST00000590339 LINC00242Q5T6M2 205 aa6.5□□□□□ -1.37
VPS25-205ENST00000590339 AMMECR1LQ6DCA0 310 aa6.5□□□□□ -1.37
VPS25-205ENST00000590339 TMEM101Q96IK0 257 aa6.5□□□□□ -1.37
VPS25-205ENST00000590339 TM2D2Q9BX73 214 aa6.5□□□□□ -1.37
VPS25-205ENST00000590339 IGHV1-58A0A0C4DH39 117 aa6.49□□□□□ -1.37
VPS25-205ENST00000590339 IGLV5-39A0A0G2JS06 123 aa6.49□□□□□ -1.37
VPS25-205ENST00000590339 A0A0J9YY99 117 aa6.49□□□□□ -1.37
VPS25-205ENST00000590339 TAX1BP3O14907 124 aa6.49□□□□□ -1.37
VPS25-205ENST00000590339 LGALS3P17931 250 aaKnown RBP6.49□□□□□ -1.37
VPS25-205ENST00000590339 NANOS2P60321 138 aaKnown RBP6.49□□□□□ -1.37
VPS25-205ENST00000590339 LINC00469Q8N7U9 141 aa6.49□□□□□ -1.37
VPS25-205ENST00000590339 C11orf45Q8TAV5 145 aa6.49□□□□□ -1.37
VPS25-205ENST00000590339 CHCHD5Q9BSY4 110 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms