RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-222	ENST00000589235	SMAGP	Q0VAQ4	97 aa		13.58	□□□□□ -0.24
CIRBP-222	ENST00000589235	HIGD2B	Q4VC39	106 aa		13.58	□□□□□ -0.24
CIRBP-222	ENST00000589235	SERTAD4-AS1	Q5TG53	156 aa		13.58	□□□□□ -0.24
CIRBP-222	ENST00000589235	SEC11C	Q9BY50	192 aa		13.58	□□□□□ -0.24
CIRBP-222	ENST00000589235	TMEM242	Q9NWH2	141 aa		13.58	□□□□□ -0.24
CIRBP-222	ENST00000589235	TRBV27	A0A0K0K1C4	114 aa		13.57	□□□□□ -0.24
CIRBP-222	ENST00000589235	TSHB	P01222	138 aa		13.57	□□□□□ -0.24
CIRBP-222	ENST00000589235	POLR2K	P53803	58 aa	Known RBP	13.57	□□□□□ -0.24
CIRBP-222	ENST00000589235	SS18	Q15532	418 aa		13.57	□□□□□ -0.24
CIRBP-222	ENST00000589235	NAT8B	Q9UHF3	227 aa		13.57	□□□□□ -0.24
CIRBP-222	ENST00000589235	PKIG	Q9Y2B9	76 aa		13.57	□□□□□ -0.24
CIRBP-222	ENST00000589235	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.56	□□□□□ -0.24
CIRBP-222	ENST00000589235	VCY	O14598	125 aa		13.56	□□□□□ -0.24
CIRBP-222	ENST00000589235	APOC3	P02656	99 aa		13.56	□□□□□ -0.24
CIRBP-222	ENST00000589235	FCER1G	P30273	86 aa		13.56	□□□□□ -0.24
CIRBP-222	ENST00000589235	AMN1	Q8IY45	258 aa		13.56	□□□□□ -0.24
CIRBP-222	ENST00000589235	SVBP	Q8N300	66 aa		13.56	□□□□□ -0.24
CIRBP-222	ENST00000589235	SPACA4	Q8TDM5	124 aa		13.56	□□□□□ -0.24
CIRBP-222	ENST00000589235		V9GYV3	84 aa		13.56	□□□□□ -0.24
CIRBP-222	ENST00000589235		A0A087WYN8	130 aa		13.55	□□□□□ -0.24
CIRBP-222	ENST00000589235	LINC00959	A0A1B0GUT2	108 aa		13.55	□□□□□ -0.24
CIRBP-222	ENST00000589235	C7orf77	A4D0Y5	90 aa		13.55	□□□□□ -0.24
CIRBP-222	ENST00000589235	XCL1	P47992	114 aa		13.55	□□□□□ -0.24
CIRBP-222	ENST00000589235	FOXI1	Q12951	378 aa		13.55	□□□□□ -0.24
CIRBP-222	ENST00000589235	MRPL52	Q86TS9	123 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-222	ENST00000589235	NUP35	Q8NFH5	326 aa		13.55	□□□□□ -0.24
CIRBP-222	ENST00000589235	ISOC2	Q96AB3	205 aa		13.55	□□□□□ -0.24
CIRBP-222	ENST00000589235		F8W036	122 aa		13.54	□□□□□ -0.24
CIRBP-222	ENST00000589235	CCL25	O15444	150 aa		13.54	□□□□□ -0.24
CIRBP-222	ENST00000589235	GAS8-AS1	O95177	125 aa		13.54	□□□□□ -0.24
CIRBP-222	ENST00000589235	SRSF3	P84103	164 aa	Known RBP	13.54	□□□□□ -0.24
CIRBP-222	ENST00000589235	COX6A2	Q02221	97 aa		13.54	□□□□□ -0.24
CIRBP-222	ENST00000589235	C7orf33	Q8WU49	177 aa		13.54	□□□□□ -0.24
CIRBP-222	ENST00000589235	IGHV1-58	A0A0C4DH39	117 aa		13.53	□□□□□ -0.24
CIRBP-222	ENST00000589235	CHTF8	P0CG12	524 aa		13.53	□□□□□ -0.24
CIRBP-222	ENST00000589235	ZNF664	Q8N3J9	261 aa		13.53	□□□□□ -0.24
CIRBP-222	ENST00000589235	KIR2DL4	Q99706	377 aa		13.53	□□□□□ -0.24
CIRBP-222	ENST00000589235	CDC42SE2	Q9NRR3	84 aa		13.53	□□□□□ -0.24
CIRBP-222	ENST00000589235	NAT8	Q9UHE5	227 aa		13.53	□□□□□ -0.24
CIRBP-222	ENST00000589235	PPP1R2P9	O14990	202 aa		13.52	□□□□□ -0.25
CIRBP-222	ENST00000589235	RPL23	P62829	140 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-222	ENST00000589235	ADIRF	Q15847	76 aa		13.52	□□□□□ -0.25
CIRBP-222	ENST00000589235	PLAC8	Q9NZF1	115 aa		13.52	□□□□□ -0.25
CIRBP-222	ENST00000589235	SCO1	O75880	301 aa		13.51	□□□□□ -0.25
CIRBP-222	ENST00000589235	SNAPIN	O95295	136 aa		13.51	□□□□□ -0.25
CIRBP-222	ENST00000589235	SUMO2	P61956	95 aa	Known RBP	13.51	□□□□□ -0.25
CIRBP-222	ENST00000589235	CD164L2	Q6UWJ8	174 aa		13.51	□□□□□ -0.25
CIRBP-222	ENST00000589235	TMEM18	Q96B42	140 aa		13.51	□□□□□ -0.25
CIRBP-222	ENST00000589235	LINC00474	Q9P2X8	69 aa		13.51	□□□□□ -0.25
CIRBP-222	ENST00000589235		A0A1B0GW15	77 aa		13.5	□□□□□ -0.25
CIRBP-222	ENST00000589235	ADCYAP1	P18509	176 aa		13.5	□□□□□ -0.25
CIRBP-222	ENST00000589235	MAJIN	Q3KP22	176 aa		13.5	□□□□□ -0.25
CIRBP-222	ENST00000589235		Q6ZRU5	148 aa		13.5	□□□□□ -0.25
CIRBP-222	ENST00000589235	SMKR1	H3BMG3	65 aa		13.49	□□□□□ -0.25
CIRBP-222	ENST00000589235	ZNF561-AS1	K7EIQ3	104 aa		13.49	□□□□□ -0.25
CIRBP-222	ENST00000589235	PRSS3P2	Q8NHM4	247 aa		13.49	□□□□□ -0.25
CIRBP-222	ENST00000589235	CSDC2	Q9Y534	153 aa	Known RBP	13.49	□□□□□ -0.25
CIRBP-222	ENST00000589235	IGKV2-24	A0A0C4DH68	120 aa		13.48	□□□□□ -0.25
CIRBP-222	ENST00000589235	C1orf196	B1AJZ1	125 aa		13.48	□□□□□ -0.25
CIRBP-222	ENST00000589235	HNRNPA3	P51991	378 aa	Known RBP	13.48	□□□□□ -0.25
CIRBP-222	ENST00000589235	FAM104B	Q5XKR9	115 aa		13.48	□□□□□ -0.25
CIRBP-222	ENST00000589235	SMIM27	A0A1W2PRY6	76 aa		13.47	□□□□□ -0.25
CIRBP-222	ENST00000589235		C9JQL5	133 aa		13.47	□□□□□ -0.25
CIRBP-222	ENST00000589235	TCAP	O15273	167 aa		13.47	□□□□□ -0.25
CIRBP-222	ENST00000589235	S100A8	P05109	93 aa		13.47	□□□□□ -0.25
CIRBP-222	ENST00000589235	MAL	P21145	153 aa		13.47	□□□□□ -0.25
CIRBP-222	ENST00000589235	CAMP	P49913	170 aa		13.47	□□□□□ -0.25
CIRBP-222	ENST00000589235	NRAC	Q8N912	160 aa		13.47	□□□□□ -0.25
CIRBP-222	ENST00000589235	STPG4	Q8N801	248 aa		13.46	□□□□□ -0.25
CIRBP-222	ENST00000589235	CARD19	Q96LW7	228 aa		13.46	□□□□□ -0.25
CIRBP-222	ENST00000589235	C20orf78	Q9BR46	151 aa		13.46	□□□□□ -0.25
CIRBP-222	ENST00000589235	CKS2	P33552	79 aa		13.45	□□□□□ -0.26
CIRBP-222	ENST00000589235	MRPL51	Q4U2R6	128 aa	Known RBP	13.45	□□□□□ -0.26
CIRBP-222	ENST00000589235	UBE2D4	Q9Y2X8	147 aa		13.44	□□□□□ -0.26
CIRBP-222	ENST00000589235	COX7A2L	O14548	114 aa		13.43	□□□□□ -0.26
CIRBP-222	ENST00000589235	PHOX2A	O14813	284 aa		13.43	□□□□□ -0.26
CIRBP-222	ENST00000589235	SYCN	Q0VAF6	134 aa		13.43	□□□□□ -0.26
CIRBP-222	ENST00000589235	TRBV24-1	A0A075B6N3	115 aa		13.42	□□□□□ -0.26
CIRBP-222	ENST00000589235	TIMM21	Q9BVV7	248 aa		13.42	□□□□□ -0.26
CIRBP-222	ENST00000589235		A0A096LNI7	61 aa		13.41	□□□□□ -0.26
CIRBP-222	ENST00000589235	RPL32	P62910	135 aa	Known RBP	13.41	□□□□□ -0.26
CIRBP-222	ENST00000589235	TRAV13-1	A0A0B4J241	112 aa		13.4	□□□□□ -0.26
CIRBP-222	ENST00000589235	APOM	O95445	188 aa		13.4	□□□□□ -0.26
CIRBP-222	ENST00000589235	HBB	P68871	147 aa		13.4	□□□□□ -0.26
CIRBP-222	ENST00000589235	LINC00526	Q96FQ7	95 aa		13.4	□□□□□ -0.26
CIRBP-222	ENST00000589235	TNFRSF6B	O95407	300 aa		13.39	□□□□□ -0.27
CIRBP-222	ENST00000589235	PLA2G2D	Q9UNK4	145 aa		13.39	□□□□□ -0.27
CIRBP-222	ENST00000589235	PPBP	P02775	128 aa		13.38	□□□□□ -0.27
CIRBP-222	ENST00000589235	IGLV4-69	A0A075B6H9	119 aa		13.37	□□□□□ -0.27
CIRBP-222	ENST00000589235	RHEB	Q15382	184 aa		13.37	□□□□□ -0.27
CIRBP-222	ENST00000589235	RNASE13	Q5GAN3	156 aa	Known RBP	13.37	□□□□□ -0.27
CIRBP-222	ENST00000589235	MRPL54	Q6P161	138 aa	Known RBP	13.37	□□□□□ -0.27
CIRBP-222	ENST00000589235	CAMK2N2	Q96S95	79 aa		13.37	□□□□□ -0.27
CIRBP-222	ENST00000589235	SMCO4	Q9NRQ5	59 aa		13.37	□□□□□ -0.27
CIRBP-222	ENST00000589235	TMA7	Q9Y2S6	64 aa	Known RBP	13.37	□□□□□ -0.27
CIRBP-222	ENST00000589235	LRP1	Q07954	4544 aa	Known RBP	13.37	□□□□□ -0.27
CIRBP-222	ENST00000589235	LOC107984640	A0A0U1RRK4	108 aa		13.36	□□□□□ -0.27
CIRBP-222	ENST00000589235		D6R8Y8	96 aa		13.36	□□□□□ -0.27
CIRBP-222	ENST00000589235	SMIM2	Q9BVW6	85 aa		13.36	□□□□□ -0.27
CIRBP-222	ENST00000589235		Q6ZUT4	128 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms