RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 BAGE3Q86Y29 109 aa10.38□□□□□ -0.75
RPRD1A-208ENST00000589050 PRR34Q9NV39 138 aa10.38□□□□□ -0.75
RPRD1A-208ENST00000589050 CSDC2Q9Y534 153 aaKnown RBP10.38□□□□□ -0.75
RPRD1A-208ENST00000589050 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
RPRD1A-208ENST00000589050 ZNF664Q8N3J9 261 aa10.37□□□□□ -0.75
RPRD1A-208ENST00000589050 CDC42SE2Q9NRR3 84 aa10.37□□□□□ -0.75
RPRD1A-208ENST00000589050 RTL8CO15255 209 aa10.36□□□□□ -0.75
RPRD1A-208ENST00000589050 MIAQ16674 131 aa10.36□□□□□ -0.75
RPRD1A-208ENST00000589050 Q6ZUT4 128 aa10.36□□□□□ -0.75
RPRD1A-208ENST00000589050 TOMM6Q96B49 74 aa10.36□□□□□ -0.75
RPRD1A-208ENST00000589050 CHCHD1Q96BP2 118 aaKnown RBP10.36□□□□□ -0.75
RPRD1A-208ENST00000589050 RMI2Q96E14 147 aa10.36□□□□□ -0.75
RPRD1A-208ENST00000589050 PYGO1Q9Y3Y4 419 aa10.36□□□□□ -0.75
RPRD1A-208ENST00000589050 IGKV2D-24A0A075B6R9 120 aa10.35□□□□□ -0.75
RPRD1A-208ENST00000589050 RNASE13Q5GAN3 156 aaKnown RBP10.35□□□□□ -0.75
RPRD1A-208ENST00000589050 Q6ZRN7 208 aaPredicted RBP10.35□□□□□ -0.75
RPRD1A-208ENST00000589050 OPRPNQ99935 248 aaPredicted RBP10.35□□□□□ -0.75
RPRD1A-208ENST00000589050 RYR3Q15413 4870 aa10.35□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST1H2BKO60814 126 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST1H2BJP06899 126 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST1H2BOP23527 126 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST1H2BBP33778 126 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST1H2BDP58876 126 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST1H2BCP62807 126 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 PMCHL1Q16048 86 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST2H2BEQ16778 126 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST1H2BHQ93079 126 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST1H2BNQ99877 126 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 HIST1H2BMQ99879 126 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 C1orf43Q9BWL3 253 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 TM2D2Q9BX73 214 aa10.34□□□□□ -0.75
RPRD1A-208ENST00000589050 IGLV10-54A0A075B6I4 117 aa10.33□□□□□ -0.76
RPRD1A-208ENST00000589050 IGLV4-3A0A075B6K6 122 aa10.33□□□□□ -0.76
RPRD1A-208ENST00000589050 LINC01549A6NIU2 74 aa10.33□□□□□ -0.76
RPRD1A-208ENST00000589050 C1orf196B1AJZ1 125 aa10.33□□□□□ -0.76
RPRD1A-208ENST00000589050 PSCAO43653 123 aa10.33□□□□□ -0.76
RPRD1A-208ENST00000589050 FAM104AQ969W3 186 aa10.33□□□□□ -0.76
RPRD1A-208ENST00000589050 SCGB3A1Q96QR1 104 aa10.33□□□□□ -0.76
RPRD1A-208ENST00000589050 A0A096LNJ9 63 aa10.32□□□□□ -0.76
RPRD1A-208ENST00000589050 TRAV8-4A0A0B4J246 113 aa10.32□□□□□ -0.76
RPRD1A-208ENST00000589050 IGIPA6NJ69 53 aa10.32□□□□□ -0.76
RPRD1A-208ENST00000589050 HSBP1O75506 76 aa10.32□□□□□ -0.76
RPRD1A-208ENST00000589050 SERF1AO75920 110 aa10.32□□□□□ -0.76
RPRD1A-208ENST00000589050 HBDP02042 147 aa10.32□□□□□ -0.76
RPRD1A-208ENST00000589050 TMEM141Q96I45 108 aa10.32□□□□□ -0.76
RPRD1A-208ENST00000589050 TIMM17AQ99595 171 aa10.32□□□□□ -0.76
RPRD1A-208ENST00000589050 COX11Q9Y6N1 276 aa10.32□□□□□ -0.76
RPRD1A-208ENST00000589050 LINC00959A0A1B0GUT2 108 aa10.31□□□□□ -0.76
RPRD1A-208ENST00000589050 NPSP0C0P6 89 aa10.31□□□□□ -0.76
RPRD1A-208ENST00000589050 LINC00310P59036 64 aa10.31□□□□□ -0.76
RPRD1A-208ENST00000589050 Q6ZN92 141 aa10.31□□□□□ -0.76
RPRD1A-208ENST00000589050 ERASQ7Z444 233 aa10.31□□□□□ -0.76
RPRD1A-208ENST00000589050 TRAV13-1A0A0B4J241 112 aa10.3□□□□□ -0.76
RPRD1A-208ENST00000589050 SS18Q15532 418 aa10.3□□□□□ -0.76
RPRD1A-208ENST00000589050 LINC00336Q6ZUF6 198 aa10.3□□□□□ -0.76
RPRD1A-208ENST00000589050 PRSS29PA6NIE9 313 aa10.29□□□□□ -0.76
RPRD1A-208ENST00000589050 IFITM10A6NMD0 228 aa10.29□□□□□ -0.76
RPRD1A-208ENST00000589050 TNP2Q05952 138 aa10.29□□□□□ -0.76
RPRD1A-208ENST00000589050 PAPPA-AS1Q5QFB9 102 aa10.29□□□□□ -0.76
RPRD1A-208ENST00000589050 TEX43Q6ZNM6 134 aa10.29□□□□□ -0.76
RPRD1A-208ENST00000589050 CHCHD10Q8WYQ3 142 aaPredicted RBP10.29□□□□□ -0.76
RPRD1A-208ENST00000589050 VCX2Q9H322 139 aa10.29□□□□□ -0.76
RPRD1A-208ENST00000589050 CCL25O15444 150 aa10.28□□□□□ -0.76
RPRD1A-208ENST00000589050 NUPR1O60356 82 aa10.28□□□□□ -0.76
RPRD1A-208ENST00000589050 PDZD11Q5EBL8 140 aa10.28□□□□□ -0.76
RPRD1A-208ENST00000589050 ZC2HC1BQ5TFG8 222 aa10.28□□□□□ -0.76
RPRD1A-208ENST00000589050 KRTAP26-1Q6PEX3 210 aa10.28□□□□□ -0.76
RPRD1A-208ENST00000589050 FAM19A2Q8N3H0 131 aa10.28□□□□□ -0.76
RPRD1A-208ENST00000589050 GAGE12HA6NDE8 117 aa10.27□□□□□ -0.77
RPRD1A-208ENST00000589050 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.27□□□□□ -0.77
RPRD1A-208ENST00000589050 XCL1P47992 114 aa10.27□□□□□ -0.77
RPRD1A-208ENST00000589050 LINC00173Q6ZV60 143 aa10.27□□□□□ -0.77
RPRD1A-208ENST00000589050 MAPKAPK5-AS1Q8N8E1 139 aa10.27□□□□□ -0.77
RPRD1A-208ENST00000589050 AMELXQ99217 191 aa10.27□□□□□ -0.77
RPRD1A-208ENST00000589050 C2orf88Q9BSF0 95 aa10.27□□□□□ -0.77
RPRD1A-208ENST00000589050 NDUFA6P56556 154 aa10.26□□□□□ -0.77
RPRD1A-208ENST00000589050 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
RPRD1A-208ENST00000589050 ATP5LO75964 103 aa10.25□□□□□ -0.77
RPRD1A-208ENST00000589050 DNAH2Q9P225 4427 aa10.25□□□□□ -0.77
RPRD1A-208ENST00000589050 FRAS1Q86XX4 4008 aa10.24□□□□□ -0.77
RPRD1A-208ENST00000589050 A0A087WTM6 91 aa10.24□□□□□ -0.77
RPRD1A-208ENST00000589050 LECT2O14960 151 aa10.24□□□□□ -0.77
RPRD1A-208ENST00000589050 UBE2D1P51668 147 aa10.24□□□□□ -0.77
RPRD1A-208ENST00000589050 FOXI1Q12951 378 aa10.24□□□□□ -0.77
RPRD1A-208ENST00000589050 CD164L2Q6UWJ8 174 aa10.24□□□□□ -0.77
RPRD1A-208ENST00000589050 LRCOL1A6NCL2 159 aa10.23□□□□□ -0.77
RPRD1A-208ENST00000589050 EREGO14944 169 aa10.23□□□□□ -0.77
RPRD1A-208ENST00000589050 PMVKQ15126 192 aa10.23□□□□□ -0.77
RPRD1A-208ENST00000589050 CST9LQ9H4G1 147 aa10.23□□□□□ -0.77
RPRD1A-208ENST00000589050 LEPROTL1O95214 131 aa10.22□□□□□ -0.77
RPRD1A-208ENST00000589050 WFDC2Q14508 124 aa10.22□□□□□ -0.77
RPRD1A-208ENST00000589050 COA6Q5JTJ3 125 aaKnown RBP10.22□□□□□ -0.77
RPRD1A-208ENST00000589050 IFI27L1Q96BM0 104 aa10.22□□□□□ -0.77
RPRD1A-208ENST00000589050 USP17L23D6RBM5 183 aa10.21□□□□□ -0.77
RPRD1A-208ENST00000589050 LINC00242Q5T6M2 205 aa10.21□□□□□ -0.77
RPRD1A-208ENST00000589050 DNAH10Q8IVF4 4471 aa10.21□□□□□ -0.78
RPRD1A-208ENST00000589050 PRSS1P07477 247 aa10.2□□□□□ -0.78
RPRD1A-208ENST00000589050 FABP4P15090 132 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms