RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 ST20Q9HBF5 79 aa9.47□□□□□ -0.89
PRKCSH-204ENST00000587290 IGHV1-58A0A0C4DH39 117 aa9.46□□□□□ -0.9
PRKCSH-204ENST00000587290 TMEM250H0YL14 139 aa9.46□□□□□ -0.9
PRKCSH-204ENST00000587290 RNASE13Q5GAN3 156 aaKnown RBP9.46□□□□□ -0.9
PRKCSH-204ENST00000587290 AMN1Q8IY45 258 aa9.46□□□□□ -0.9
PRKCSH-204ENST00000587290 HIGD1CA8MV81 97 aa9.45□□□□□ -0.9
PRKCSH-204ENST00000587290 LINC01600Q96MT4 127 aa9.45□□□□□ -0.9
PRKCSH-204ENST00000587290 CDC42SE2Q9NRR3 84 aa9.45□□□□□ -0.9
PRKCSH-204ENST00000587290 RAB4AP20338 218 aa9.44□□□□□ -0.9
PRKCSH-204ENST00000587290 POLR2KP53803 58 aaKnown RBP9.44□□□□□ -0.9
PRKCSH-204ENST00000587290 CT83Q5H943 113 aa9.44□□□□□ -0.9
PRKCSH-204ENST00000587290 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
PRKCSH-204ENST00000587290 BORCS7Q96B45 105 aa9.44□□□□□ -0.9
PRKCSH-204ENST00000587290 SMIM7Q9BQ49 75 aa9.44□□□□□ -0.9
PRKCSH-204ENST00000587290 hCG_2014768A0A024R1R8 64 aa9.43□□□□□ -0.9
PRKCSH-204ENST00000587290 A0A1B0GUT8 65 aa9.43□□□□□ -0.9
PRKCSH-204ENST00000587290 C7orf77A4D0Y5 90 aa9.43□□□□□ -0.9
PRKCSH-204ENST00000587290 SYCNQ0VAF6 134 aa9.43□□□□□ -0.9
PRKCSH-204ENST00000587290 SS18Q15532 418 aa9.43□□□□□ -0.9
PRKCSH-204ENST00000587290 ZNF664Q8N3J9 261 aa9.43□□□□□ -0.9
PRKCSH-204ENST00000587290 TMEM191AQ9H0A3 160 aa9.43□□□□□ -0.9
PRKCSH-204ENST00000587290 RNF213Q63HN8 5207 aa9.42□□□□□ -0.9
PRKCSH-204ENST00000587290 ZNF561-AS1K7EIQ3 104 aa9.42□□□□□ -0.9
PRKCSH-204ENST00000587290 CAMPP49913 170 aa9.42□□□□□ -0.9
PRKCSH-204ENST00000587290 BLOC1S1P78537 153 aa9.42□□□□□ -0.9
PRKCSH-204ENST00000587290 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
PRKCSH-204ENST00000587290 CD164L2Q6UWJ8 174 aa9.42□□□□□ -0.9
PRKCSH-204ENST00000587290 MRPL52Q86TS9 123 aaKnown RBP9.42□□□□□ -0.9
PRKCSH-204ENST00000587290 TSKUQ8WUA8 353 aa9.42□□□□□ -0.9
PRKCSH-204ENST00000587290 IGLV4-69A0A075B6H9 119 aa9.41□□□□□ -0.9
PRKCSH-204ENST00000587290 TRBV27A0A0K0K1C4 114 aa9.41□□□□□ -0.9
PRKCSH-204ENST00000587290 EIF5A2Q9GZV4 153 aaKnown RBP9.41□□□□□ -0.9
PRKCSH-204ENST00000587290 A0A0J9YXV3 536 aa9.4□□□□□ -0.9
PRKCSH-204ENST00000587290 A0A1W2PNN7 141 aa9.4□□□□□ -0.9
PRKCSH-204ENST00000587290 ZNF727A8MUV8 499 aa9.4□□□□□ -0.9
PRKCSH-204ENST00000587290 PTTG1IPP53801 180 aa9.4□□□□□ -0.9
PRKCSH-204ENST00000587290 Q6ZUT4 128 aa9.4□□□□□ -0.9
PRKCSH-204ENST00000587290 AKAP14Q86UN6 197 aa9.4□□□□□ -0.9
PRKCSH-204ENST00000587290 NRACQ8N912 160 aa9.4□□□□□ -0.9
PRKCSH-204ENST00000587290 LINC00474Q9P2X8 69 aa9.4□□□□□ -0.9
PRKCSH-204ENST00000587290 V9GYV3 84 aa9.4□□□□□ -0.9
PRKCSH-204ENST00000587290 TRAV13-1A0A0B4J241 112 aa9.39□□□□□ -0.91
PRKCSH-204ENST00000587290 MALP21145 153 aa9.39□□□□□ -0.91
PRKCSH-204ENST00000587290 FCER1GP30273 86 aa9.39□□□□□ -0.91
PRKCSH-204ENST00000587290 SPINK6Q6UWN8 80 aa9.39□□□□□ -0.91
PRKCSH-204ENST00000587290 C5orf38Q86SI9 138 aa9.39□□□□□ -0.91
PRKCSH-204ENST00000587290 NUP35Q8NFH5 326 aa9.39□□□□□ -0.91
PRKCSH-204ENST00000587290 OSTCQ9NRP0 149 aa9.39□□□□□ -0.91
PRKCSH-204ENST00000587290 UBE2D4Q9Y2X8 147 aa9.39□□□□□ -0.91
PRKCSH-204ENST00000587290 COX7A2LO14548 114 aa9.38□□□□□ -0.91
PRKCSH-204ENST00000587290 SRP19P09132 144 aaKnown RBP9.38□□□□□ -0.91
PRKCSH-204ENST00000587290 KRTAP10-8P60410 259 aa9.38□□□□□ -0.91
PRKCSH-204ENST00000587290 SRSF9Q13242 221 aaKnown RBP eCLIP9.38□□□□□ -0.91
PRKCSH-204ENST00000587290 Q6ZRP5 223 aa9.38□□□□□ -0.91
PRKCSH-204ENST00000587290 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
PRKCSH-204ENST00000587290 FAM210AQ96ND0 272 aa9.37□□□□□ -0.91
PRKCSH-204ENST00000587290 CAMK2N2Q96S95 79 aa9.37□□□□□ -0.91
PRKCSH-204ENST00000587290 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
PRKCSH-204ENST00000587290 C1orf196B1AJZ1 125 aa9.36□□□□□ -0.91
PRKCSH-204ENST00000587290 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.36□□□□□ -0.91
PRKCSH-204ENST00000587290 VCYO14598 125 aa9.36□□□□□ -0.91
PRKCSH-204ENST00000587290 RPL18AQ02543 176 aaKnown RBP9.36□□□□□ -0.91
PRKCSH-204ENST00000587290 RIGQ13278 110 aa9.36□□□□□ -0.91
PRKCSH-204ENST00000587290 REG3GQ6UW15 175 aa9.36□□□□□ -0.91
PRKCSH-204ENST00000587290 OPRPNQ99935 248 aaPredicted RBP9.36□□□□□ -0.91
PRKCSH-204ENST00000587290 PKIGQ9Y2B9 76 aa9.36□□□□□ -0.91
PRKCSH-204ENST00000587290 RPL39P62891 51 aaKnown RBP9.35□□□□□ -0.91
PRKCSH-204ENST00000587290 MRPL51Q4U2R6 128 aaKnown RBP9.35□□□□□ -0.91
PRKCSH-204ENST00000587290 ISOC2Q96AB3 205 aa9.35□□□□□ -0.91
PRKCSH-204ENST00000587290 APOMO95445 188 aa9.34□□□□□ -0.91
PRKCSH-204ENST00000587290 SPAG11BQ08648 103 aa9.34□□□□□ -0.91
PRKCSH-204ENST00000587290 C9orf116Q5BN46 136 aaPredicted RBP9.34□□□□□ -0.91
PRKCSH-204ENST00000587290 PHF5AQ7RTV0 110 aaKnown RBP9.34□□□□□ -0.91
PRKCSH-204ENST00000587290 PSORS1C2Q9UIG4 136 aa9.34□□□□□ -0.91
PRKCSH-204ENST00000587290 LPAP08519 4548 aa9.33□□□□□ -0.92
PRKCSH-204ENST00000587290 C9JQL5 133 aa9.33□□□□□ -0.92
PRKCSH-204ENST00000587290 RPL23P62829 140 aaKnown RBP9.33□□□□□ -0.92
PRKCSH-204ENST00000587290 FAM104AQ969W3 186 aa9.33□□□□□ -0.92
PRKCSH-204ENST00000587290 KIR2DL4Q99706 377 aa9.33□□□□□ -0.92
PRKCSH-204ENST00000587290 CSDC2Q9Y534 153 aaKnown RBP9.33□□□□□ -0.92
PRKCSH-204ENST00000587290 ADIRFQ15847 76 aa9.32□□□□□ -0.92
PRKCSH-204ENST00000587290 FAM104BQ5XKR9 115 aa9.32□□□□□ -0.92
PRKCSH-204ENST00000587290 NAT8BQ9UHF3 227 aa9.32□□□□□ -0.92
PRKCSH-204ENST00000587290 FAM168BA1KXE4 195 aa9.3□□□□□ -0.92
PRKCSH-204ENST00000587290 MT-ND6P03923 174 aa9.3□□□□□ -0.92
PRKCSH-204ENST00000587290 TMEM241Q24JQ0 296 aa9.3□□□□□ -0.92
PRKCSH-204ENST00000587290 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
PRKCSH-204ENST00000587290 C2orf48Q96LS8 159 aa9.3□□□□□ -0.92
PRKCSH-204ENST00000587290 PPP1R2P9O14990 202 aa9.29□□□□□ -0.92
PRKCSH-204ENST00000587290 PPP1R17O96001 155 aa9.29□□□□□ -0.92
PRKCSH-204ENST00000587290 CKS2P33552 79 aa9.29□□□□□ -0.92
PRKCSH-204ENST00000587290 SRSF3P84103 164 aaKnown RBP9.29□□□□□ -0.92
PRKCSH-204ENST00000587290 FAM74A3Q4VXF1 159 aa9.29□□□□□ -0.92
PRKCSH-204ENST00000587290 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
PRKCSH-204ENST00000587290 C10orf25Q5T742 122 aa9.29□□□□□ -0.92
PRKCSH-204ENST00000587290 MRPL54Q6P161 138 aaKnown RBP9.29□□□□□ -0.92
PRKCSH-204ENST00000587290 ORAOV1Q8WV07 137 aa9.29□□□□□ -0.92
PRKCSH-204ENST00000587290 TIMM21Q9BVV7 248 aa9.29□□□□□ -0.92
PRKCSH-204ENST00000587290 SMIM27A0A1W2PRY6 76 aa9.28□□□□□ -0.92
PRKCSH-204ENST00000587290 TCAPO15273 167 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms