RNA–Protein interactions for RNA: ENST00000586275.1

PDE4A-205, Transcript of phosphodiesterase 4A, humanhuman

TSL 3

Gene PDE4A, Length 695 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-205ENST00000586275 LINC00959A0A1B0GUT2 108 aa13.35□□□□□ -0.27
PDE4A-205ENST00000586275 XCL1P47992 114 aa13.35□□□□□ -0.27
PDE4A-205ENST00000586275 RIGQ13278 110 aa13.35□□□□□ -0.27
PDE4A-205ENST00000586275 PLAC8Q9NZF1 115 aa13.35□□□□□ -0.27
PDE4A-205ENST00000586275 TMEM241Q24JQ0 296 aa13.34□□□□□ -0.27
PDE4A-205ENST00000586275 MRPL52Q86TS9 123 aaKnown RBP13.34□□□□□ -0.27
PDE4A-205ENST00000586275 NUP35Q8NFH5 326 aa13.34□□□□□ -0.27
PDE4A-205ENST00000586275 PKHD1L1Q86WI1 4243 aa13.34□□□□□ -0.27
PDE4A-205ENST00000586275 CCL25O15444 150 aa13.33□□□□□ -0.28
PDE4A-205ENST00000586275 FAM74A3Q4VXF1 159 aa13.33□□□□□ -0.28
PDE4A-205ENST00000586275 PRSS3P2Q8NHM4 247 aa13.33□□□□□ -0.28
PDE4A-205ENST00000586275 ISOC2Q96AB3 205 aa13.33□□□□□ -0.28
PDE4A-205ENST00000586275 CDC42SE2Q9NRR3 84 aa13.33□□□□□ -0.28
PDE4A-205ENST00000586275 VCYO14598 125 aa13.32□□□□□ -0.28
PDE4A-205ENST00000586275 NAT8BQ9UHF3 227 aa13.32□□□□□ -0.28
PDE4A-205ENST00000586275 C7orf77A4D0Y5 90 aa13.31□□□□□ -0.28
PDE4A-205ENST00000586275 SMKR1H3BMG3 65 aa13.31□□□□□ -0.28
PDE4A-205ENST00000586275 PPP1R17O96001 155 aa13.31□□□□□ -0.28
PDE4A-205ENST00000586275 RPL23P62829 140 aaKnown RBP13.31□□□□□ -0.28
PDE4A-205ENST00000586275 IFITM2Q01629 132 aa13.31□□□□□ -0.28
PDE4A-205ENST00000586275 SS18Q15532 418 aa13.31□□□□□ -0.28
PDE4A-205ENST00000586275 ZNF664Q8N3J9 261 aa13.31□□□□□ -0.28
PDE4A-205ENST00000586275 IGHV1-58A0A0C4DH39 117 aa13.3□□□□□ -0.28
PDE4A-205ENST00000586275 FCER1GP30273 86 aa13.3□□□□□ -0.28
PDE4A-205ENST00000586275 MAJINQ3KP22 176 aa13.3□□□□□ -0.28
PDE4A-205ENST00000586275 Q6ZRU5 148 aa13.3□□□□□ -0.28
PDE4A-205ENST00000586275 HMCN2Q8NDA2 5059 aa13.3□□□□□ -0.28
PDE4A-205ENST00000586275 IGKV2-24A0A0C4DH68 120 aa13.29□□□□□ -0.28
PDE4A-205ENST00000586275 CD164L2Q6UWJ8 174 aa13.29□□□□□ -0.28
PDE4A-205ENST00000586275 NRACQ8N912 160 aa13.29□□□□□ -0.28
PDE4A-205ENST00000586275 C7orf33Q8WU49 177 aa13.29□□□□□ -0.28
PDE4A-205ENST00000586275 SUMO2P61956 95 aaKnown RBP13.28□□□□□ -0.28
PDE4A-205ENST00000586275 ADIRFQ15847 76 aa13.28□□□□□ -0.28
PDE4A-205ENST00000586275 NAT8Q9UHE5 227 aa13.28□□□□□ -0.28
PDE4A-205ENST00000586275 C9JQL5 133 aa13.27□□□□□ -0.29
PDE4A-205ENST00000586275 PHOX2AO14813 284 aa13.27□□□□□ -0.29
PDE4A-205ENST00000586275 SMIM27A0A1W2PRY6 76 aa13.26□□□□□ -0.29
PDE4A-205ENST00000586275 SMAGPQ0VAQ4 97 aa13.26□□□□□ -0.29
PDE4A-205ENST00000586275 FAM104BQ5XKR9 115 aa13.26□□□□□ -0.29
PDE4A-205ENST00000586275 STPG4Q8N801 248 aa13.26□□□□□ -0.29
PDE4A-205ENST00000586275 LINC00526Q96FQ7 95 aa13.26□□□□□ -0.29
PDE4A-205ENST00000586275 KIR2DL4Q99706 377 aa13.26□□□□□ -0.29
PDE4A-205ENST00000586275 PKIGQ9Y2B9 76 aa13.26□□□□□ -0.29
PDE4A-205ENST00000586275 CSDC2Q9Y534 153 aaKnown RBP13.26□□□□□ -0.29
PDE4A-205ENST00000586275 A0A096LNI7 61 aa13.25□□□□□ -0.29
PDE4A-205ENST00000586275 PPP1R2P9O14990 202 aa13.25□□□□□ -0.29
PDE4A-205ENST00000586275 MRPL51Q4U2R6 128 aaKnown RBP13.25□□□□□ -0.29
PDE4A-205ENST00000586275 LINC00474Q9P2X8 69 aa13.25□□□□□ -0.29
PDE4A-205ENST00000586275 C1orf196B1AJZ1 125 aa13.24□□□□□ -0.29
PDE4A-205ENST00000586275 ZNF561-AS1K7EIQ3 104 aa13.24□□□□□ -0.29
PDE4A-205ENST00000586275 CAMPP49913 170 aa13.24□□□□□ -0.29
PDE4A-205ENST00000586275 SRSF3P84103 164 aaKnown RBP13.24□□□□□ -0.29
PDE4A-205ENST00000586275 PEA15Q15121 130 aa13.24□□□□□ -0.29
PDE4A-205ENST00000586275 CARD19Q96LW7 228 aa13.24□□□□□ -0.29
PDE4A-205ENST00000586275 UBE2D4Q9Y2X8 147 aa13.24□□□□□ -0.29
PDE4A-205ENST00000586275 A0A1B0GW15 77 aa13.23□□□□□ -0.29
PDE4A-205ENST00000586275 LINC00862A6NCI5 91 aa13.23□□□□□ -0.29
PDE4A-205ENST00000586275 SMDT1Q9H4I9 107 aa13.23□□□□□ -0.29
PDE4A-205ENST00000586275 MT1HL1P0DM35 61 aa13.22□□□□□ -0.29
PDE4A-205ENST00000586275 SYCNQ0VAF6 134 aa13.22□□□□□ -0.29
PDE4A-205ENST00000586275 C20orf78Q9BR46 151 aa13.22□□□□□ -0.29
PDE4A-205ENST00000586275 TRBV24-1A0A075B6N3 115 aa13.21□□□□□ -0.29
PDE4A-205ENST00000586275 MALP21145 153 aa13.21□□□□□ -0.29
PDE4A-205ENST00000586275 TMEM18Q96B42 140 aa13.21□□□□□ -0.29
PDE4A-205ENST00000586275 PLA2G2DQ9UNK4 145 aa13.21□□□□□ -0.29
PDE4A-205ENST00000586275 COX7A2LO14548 114 aa13.2□□□□□ -0.3
PDE4A-205ENST00000586275 CKS2P33552 79 aa13.2□□□□□ -0.3
PDE4A-205ENST00000586275 RNASE13Q5GAN3 156 aaKnown RBP13.2□□□□□ -0.3
PDE4A-205ENST00000586275 TIMM21Q9BVV7 248 aa13.2□□□□□ -0.3
PDE4A-205ENST00000586275 TRAV13-1A0A0B4J241 112 aa13.19□□□□□ -0.3
PDE4A-205ENST00000586275 RPL32P62910 135 aaKnown RBP13.19□□□□□ -0.3
PDE4A-205ENST00000586275 PRR3P79522 188 aaKnown RBP13.19□□□□□ -0.3
PDE4A-205ENST00000586275 IGLV4-69A0A075B6H9 119 aa13.18□□□□□ -0.3
PDE4A-205ENST00000586275 TCAPO15273 167 aa13.18□□□□□ -0.3
PDE4A-205ENST00000586275 TNFRSF6BO95407 300 aa13.18□□□□□ -0.3
PDE4A-205ENST00000586275 S100A8P05109 93 aa13.18□□□□□ -0.3
PDE4A-205ENST00000586275 Q6ZUT4 128 aa13.17□□□□□ -0.3
PDE4A-205ENST00000586275 F8W036 122 aa13.16□□□□□ -0.3
PDE4A-205ENST00000586275 HBBP68871 147 aa13.16□□□□□ -0.3
PDE4A-205ENST00000586275 MRPL54Q6P161 138 aaKnown RBP13.16□□□□□ -0.3
PDE4A-205ENST00000586275 D6R8Y8 96 aa13.15□□□□□ -0.3
PDE4A-205ENST00000586275 LOC107984640A0A0U1RRK4 108 aa13.14□□□□□ -0.31
PDE4A-205ENST00000586275 A0A1B0GXF2 115 aa13.14□□□□□ -0.31
PDE4A-205ENST00000586275 PTTG1IPP53801 180 aa13.14□□□□□ -0.31
PDE4A-205ENST00000586275 RPL39P62891 51 aaKnown RBP13.14□□□□□ -0.31
PDE4A-205ENST00000586275 CLLU1Q5K131 121 aa13.14□□□□□ -0.31
PDE4A-205ENST00000586275 C5orf38Q86SI9 138 aa13.14□□□□□ -0.31
PDE4A-205ENST00000586275 SMIM2Q9BVW6 85 aa13.14□□□□□ -0.31
PDE4A-205ENST00000586275 APOMO95445 188 aa13.13□□□□□ -0.31
PDE4A-205ENST00000586275 C2orf48Q96LS8 159 aa13.13□□□□□ -0.31
PDE4A-205ENST00000586275 CAMK2N2Q96S95 79 aa13.13□□□□□ -0.31
PDE4A-205ENST00000586275 PPBPP02775 128 aa13.12□□□□□ -0.31
PDE4A-205ENST00000586275 GAGE2BQ13066 116 aa13.12□□□□□ -0.31
PDE4A-205ENST00000586275 SPANXA1Q9NS26 97 aa13.12□□□□□ -0.31
PDE4A-205ENST00000586275 NPYP01303 97 aa13.11□□□□□ -0.31
PDE4A-205ENST00000586275 FAM104AQ969W3 186 aa13.11□□□□□ -0.31
PDE4A-205ENST00000586275 MRPS36P82909 103 aaKnown RBP13.09□□□□□ -0.31
PDE4A-205ENST00000586275 LINC01600Q96MT4 127 aa13.09□□□□□ -0.31
PDE4A-205ENST00000586275 OPRPNQ99935 248 aaPredicted RBP13.09□□□□□ -0.31
PDE4A-205ENST00000586275 SPAG11BQ08648 103 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms