RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 IGLV4-60A0A075B6I1 120 aa8.08□□□□□ -1.12
SS18-225ENST00000585121 IGLV10-54A0A075B6I4 117 aa8.08□□□□□ -1.12
SS18-225ENST00000585121 SDHAF1A6NFY7 115 aa8.08□□□□□ -1.12
SS18-225ENST00000585121 TMEM191AQ9H0A3 160 aa8.08□□□□□ -1.12
SS18-225ENST00000585121 MRPL18Q9H0U6 180 aaKnown RBP8.08□□□□□ -1.12
SS18-225ENST00000585121 H7C423 109 aa8.08□□□□□ -1.12
SS18-225ENST00000585121 I3L3M4 83 aa8.08□□□□□ -1.12
SS18-225ENST00000585121 CAMPP49913 170 aa8.08□□□□□ -1.12
SS18-225ENST00000585121 DGAT2L7PQ6IED9 249 aa8.08□□□□□ -1.12
SS18-225ENST00000585121 ST20Q9HBF5 79 aa8.08□□□□□ -1.12
SS18-225ENST00000585121 HIST1H2BKO60814 126 aa8.07□□□□□ -1.12
SS18-225ENST00000585121 PLA2G1BP04054 148 aaKnown RBP8.07□□□□□ -1.12
SS18-225ENST00000585121 HIST1H2BJP06899 126 aa8.07□□□□□ -1.12
SS18-225ENST00000585121 HIST1H2BOP23527 126 aa8.07□□□□□ -1.12
SS18-225ENST00000585121 HIST1H2BBP33778 126 aa8.07□□□□□ -1.12
SS18-225ENST00000585121 HIST1H2BDP58876 126 aa8.07□□□□□ -1.12
SS18-225ENST00000585121 HIST1H2BCP62807 126 aa8.07□□□□□ -1.12
SS18-225ENST00000585121 HIST2H2BEQ16778 126 aa8.07□□□□□ -1.12
SS18-225ENST00000585121 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.07□□□□□ -1.12
SS18-225ENST00000585121 RNASEKQ6P5S7 137 aaKnown RBP8.07□□□□□ -1.12
SS18-225ENST00000585121 HIST1H2BHQ93079 126 aa8.07□□□□□ -1.12
SS18-225ENST00000585121 HIST1H2BNQ99877 126 aa8.07□□□□□ -1.12
SS18-225ENST00000585121 HIST1H2BMQ99879 126 aa8.07□□□□□ -1.12
SS18-225ENST00000585121 TRBV6-5A0A0K0K1A5 114 aa8.06□□□□□ -1.12
SS18-225ENST00000585121 S100A6P06703 90 aa8.06□□□□□ -1.12
SS18-225ENST00000585121 PRSS1P07477 247 aa8.06□□□□□ -1.12
SS18-225ENST00000585121 KRTAP26-1Q6PEX3 210 aa8.06□□□□□ -1.12
SS18-225ENST00000585121 MRAP2Q96G30 205 aa8.06□□□□□ -1.12
SS18-225ENST00000585121 CHAC1Q9BUX1 264 aa8.06□□□□□ -1.12
SS18-225ENST00000585121 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
SS18-225ENST00000585121 IGKV3OR2-268A0A0C4DH90 116 aa8.05□□□□□ -1.12
SS18-225ENST00000585121 TMEM101Q96IK0 257 aa8.05□□□□□ -1.12
SS18-225ENST00000585121 AP5S1Q9NUS5 200 aa8.05□□□□□ -1.12
SS18-225ENST00000585121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.04□□□□□ -1.12
SS18-225ENST00000585121 hDV102S1A0JD36 115 aa8.04□□□□□ -1.12
SS18-225ENST00000585121 IGKV2-29A2NJV5 120 aaPredicted RBP8.04□□□□□ -1.12
SS18-225ENST00000585121 PPP1R17O96001 155 aa8.04□□□□□ -1.12
SS18-225ENST00000585121 RAB4AP20338 218 aa8.04□□□□□ -1.12
SS18-225ENST00000585121 CFAP161Q6P656 301 aa8.04□□□□□ -1.12
SS18-225ENST00000585121 SCXQ7RTU7 201 aa8.04□□□□□ -1.12
SS18-225ENST00000585121 LINC00528Q8N1L1 170 aa8.04□□□□□ -1.12
SS18-225ENST00000585121 C5orf52A6NGY3 159 aa8.03□□□□□ -1.12
SS18-225ENST00000585121 FGF6P10767 208 aa8.03□□□□□ -1.12
SS18-225ENST00000585121 ZNF25P17030 456 aaPredicted RBP8.03□□□□□ -1.12
SS18-225ENST00000585121 COA6Q5JTJ3 125 aaKnown RBP8.03□□□□□ -1.12
SS18-225ENST00000585121 AMN1Q8IY45 258 aa8.03□□□□□ -1.12
SS18-225ENST00000585121 RNF185Q96GF1 192 aa8.03□□□□□ -1.12
SS18-225ENST00000585121 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
SS18-225ENST00000585121 GAGE12HA6NDE8 117 aa8.03□□□□□ -1.12
SS18-225ENST00000585121 NDUFA6P56556 154 aa8.03□□□□□ -1.12
SS18-225ENST00000585121 FAM104BQ5XKR9 115 aa8.03□□□□□ -1.12
SS18-225ENST00000585121 C9orf163Q8N9P6 203 aa8.03□□□□□ -1.12
SS18-225ENST00000585121 VCYO14598 125 aa8.02□□□□□ -1.13
SS18-225ENST00000585121 FCER1GP30273 86 aa8.02□□□□□ -1.13
SS18-225ENST00000585121 SNRPEP62304 92 aaKnown RBP8.02□□□□□ -1.13
SS18-225ENST00000585121 OR5A1Q8NGJ0 315 aa8.02□□□□□ -1.13
SS18-225ENST00000585121 CIRBP-AS1Q8TBR5 109 aa8.02□□□□□ -1.13
SS18-225ENST00000585121 TRBV27A0A0K0K1C4 114 aa8.01□□□□□ -1.13
SS18-225ENST00000585121 GAS8-AS1O95177 125 aa8.01□□□□□ -1.13
SS18-225ENST00000585121 TSHBP01222 138 aa8.01□□□□□ -1.13
SS18-225ENST00000585121 POLR2KP53803 58 aaKnown RBP8.01□□□□□ -1.13
SS18-225ENST00000585121 SMAGPQ0VAQ4 97 aa8.01□□□□□ -1.13
SS18-225ENST00000585121 KIAA1644Q3SXP7 199 aa8.01□□□□□ -1.13
SS18-225ENST00000585121 CHCHD10Q8WYQ3 142 aaPredicted RBP8.01□□□□□ -1.13
SS18-225ENST00000585121 ALKBH7Q9BT30 221 aaPredicted RBP8.01□□□□□ -1.13
SS18-225ENST00000585121 SMKR1H3BMG3 65 aa8□□□□□ -1.13
SS18-225ENST00000585121 PPBPP02775 128 aa8□□□□□ -1.13
SS18-225ENST00000585121 ESDP10768 282 aa8□□□□□ -1.13
SS18-225ENST00000585121 CNBPP62633 177 aaKnown RBP8□□□□□ -1.13
SS18-225ENST00000585121 KIR2DL4Q99706 377 aa8□□□□□ -1.13
SS18-225ENST00000585121 DMBT1Q9UGM3 2413 aaPredicted RBP8□□□□□ -1.13
SS18-225ENST00000585121 FLG2Q5D862 2391 aaPredicted RBP7.99□□□□□ -1.13
SS18-225ENST00000585121 IGHV3-64A0A075B6Q5 118 aa7.99□□□□□ -1.13
SS18-225ENST00000585121 LOC105371267A0A1B0GV96 52 aa7.99□□□□□ -1.13
SS18-225ENST00000585121 MYCBP2O75592 4640 aa7.99□□□□□ -1.13
SS18-225ENST00000585121 CKS2P33552 79 aa7.98□□□□□ -1.13
SS18-225ENST00000585121 SUMO2P61956 95 aaKnown RBP7.98□□□□□ -1.13
SS18-225ENST00000585121 MRPL51Q4U2R6 128 aaKnown RBP7.98□□□□□ -1.13
SS18-225ENST00000585121 DPH3Q96FX2 82 aa7.98□□□□□ -1.13
SS18-225ENST00000585121 SS18Q15532 418 aa7.98□□□□□ -1.13
SS18-225ENST00000585121 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
SS18-225ENST00000585121 MRPL52Q86TS9 123 aaKnown RBP7.98□□□□□ -1.13
SS18-225ENST00000585121 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
SS18-225ENST00000585121 ORMDL3Q8N138 153 aa7.98□□□□□ -1.13
SS18-225ENST00000585121 C18orf32Q8TCD1 76 aa7.98□□□□□ -1.13
SS18-225ENST00000585121 TMEM18Q96B42 140 aa7.98□□□□□ -1.13
SS18-225ENST00000585121 LAMTOR2Q9Y2Q5 125 aa7.98□□□□□ -1.13
SS18-225ENST00000585121 LINC00959A0A1B0GUT2 108 aa7.97□□□□□ -1.13
SS18-225ENST00000585121 TCAPO15273 167 aa7.97□□□□□ -1.13
SS18-225ENST00000585121 XCL1P47992 114 aa7.97□□□□□ -1.13
SS18-225ENST00000585121 ZNF664Q8N3J9 261 aa7.97□□□□□ -1.13
SS18-225ENST00000585121 NRACQ8N912 160 aa7.97□□□□□ -1.13
SS18-225ENST00000585121 C20orf78Q9BR46 151 aa7.97□□□□□ -1.13
SS18-225ENST00000585121 CDC42SE2Q9NRR3 84 aa7.97□□□□□ -1.13
SS18-225ENST00000585121 CCL25O15444 150 aa7.96□□□□□ -1.14
SS18-225ENST00000585121 C15orf56Q8N910 161 aa7.96□□□□□ -1.14
SS18-225ENST00000585121 HERC1Q15751 4861 aa7.95□□□□□ -1.14
SS18-225ENST00000585121 D6R8Y8 96 aa7.95□□□□□ -1.14
SS18-225ENST00000585121 FOXI1Q12951 378 aa7.95□□□□□ -1.14
SS18-225ENST00000585121 HIGD2BQ4VC39 106 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms