RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
CCDC47-206ENST00000584112 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.11□□□□□ -1.27
CCDC47-206ENST00000584112 IGKV2-29A2NJV5 120 aaPredicted RBP7.11□□□□□ -1.27
CCDC47-206ENST00000584112 FGF6P10767 208 aa7.11□□□□□ -1.27
CCDC47-206ENST00000584112 RNF185Q96GF1 192 aa7.11□□□□□ -1.27
CCDC47-206ENST00000584112 TMEM101Q96IK0 257 aa7.11□□□□□ -1.27
CCDC47-206ENST00000584112 SRP19P09132 144 aaKnown RBP7.1□□□□□ -1.27
CCDC47-206ENST00000584112 RIGQ13278 110 aa7.1□□□□□ -1.27
CCDC47-206ENST00000584112 CIRBPQ14011 172 aaKnown RBP7.1□□□□□ -1.27
CCDC47-206ENST00000584112 FAM74A3Q4VXF1 159 aa7.1□□□□□ -1.27
CCDC47-206ENST00000584112 C15orf56Q8N910 161 aa7.1□□□□□ -1.27
CCDC47-206ENST00000584112 OR5A1Q8NGJ0 315 aa7.1□□□□□ -1.27
CCDC47-206ENST00000584112 CHCHD10Q8WYQ3 142 aaPredicted RBP7.1□□□□□ -1.27
CCDC47-206ENST00000584112 MRAP2Q96G30 205 aa7.1□□□□□ -1.27
CCDC47-206ENST00000584112 PANO1I0J062 215 aa7.09□□□□□ -1.27
CCDC47-206ENST00000584112 DPH3Q96FX2 82 aa7.09□□□□□ -1.27
CCDC47-206ENST00000584112 TRBV27A0A0K0K1C4 114 aa7.08□□□□□ -1.28
CCDC47-206ENST00000584112 PPP1R17O96001 155 aa7.08□□□□□ -1.28
CCDC47-206ENST00000584112 TSHBP01222 138 aa7.08□□□□□ -1.28
CCDC47-206ENST00000584112 SLPIP03973 132 aa7.08□□□□□ -1.28
CCDC47-206ENST00000584112 ESDP10768 282 aa7.08□□□□□ -1.28
CCDC47-206ENST00000584112 RAB4AP20338 218 aa7.08□□□□□ -1.28
CCDC47-206ENST00000584112 RPS10P46783 165 aaKnown RBP7.08□□□□□ -1.28
CCDC47-206ENST00000584112 POLR2KP53803 58 aaKnown RBP7.08□□□□□ -1.28
CCDC47-206ENST00000584112 TMEM241Q24JQ0 296 aa7.08□□□□□ -1.28
CCDC47-206ENST00000584112 TMEM242Q9NWH2 141 aa7.08□□□□□ -1.28
CCDC47-206ENST00000584112 V9GYV3 84 aa7.08□□□□□ -1.28
CCDC47-206ENST00000584112 GVQW2A0A096LPI5 108 aaPredicted RBP7.07□□□□□ -1.28
CCDC47-206ENST00000584112 C7orf77A4D0Y5 90 aa7.07□□□□□ -1.28
CCDC47-206ENST00000584112 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.07□□□□□ -1.28
CCDC47-206ENST00000584112 SMAGPQ0VAQ4 97 aa7.07□□□□□ -1.28
CCDC47-206ENST00000584112 FOXI1Q12951 378 aa7.07□□□□□ -1.28
CCDC47-206ENST00000584112 HIGD2BQ4VC39 106 aa7.07□□□□□ -1.28
CCDC47-206ENST00000584112 MRPL52Q86TS9 123 aaKnown RBP7.07□□□□□ -1.28
CCDC47-206ENST00000584112 AMN1Q8IY45 258 aa7.07□□□□□ -1.28
CCDC47-206ENST00000584112 NUP35Q8NFH5 326 aa7.07□□□□□ -1.28
CCDC47-206ENST00000584112 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
CCDC47-206ENST00000584112 ISOC2Q96AB3 205 aa7.07□□□□□ -1.28
CCDC47-206ENST00000584112 NAT8BQ9UHF3 227 aa7.07□□□□□ -1.28
CCDC47-206ENST00000584112 PKIGQ9Y2B9 76 aa7.07□□□□□ -1.28
CCDC47-206ENST00000584112 A0A087WYN8 130 aa7.06□□□□□ -1.28
CCDC47-206ENST00000584112 LINC00959A0A1B0GUT2 108 aa7.06□□□□□ -1.28
CCDC47-206ENST00000584112 VCYO14598 125 aa7.06□□□□□ -1.28
CCDC47-206ENST00000584112 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
CCDC47-206ENST00000584112 FCER1GP30273 86 aa7.06□□□□□ -1.28
CCDC47-206ENST00000584112 XCL1P47992 114 aa7.06□□□□□ -1.28
CCDC47-206ENST00000584112 RPL23P62829 140 aaKnown RBP7.06□□□□□ -1.28
CCDC47-206ENST00000584112 SS18Q15532 418 aa7.06□□□□□ -1.28
CCDC47-206ENST00000584112 ADIRFQ15847 76 aa7.06□□□□□ -1.28
CCDC47-206ENST00000584112 IGHV1-58A0A0C4DH39 117 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 PPP1R2P9O14990 202 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 CCL25O15444 150 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 CHTF8P0CG12 524 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 COX6A2Q02221 97 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 PEA15Q15121 130 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 ZNF664Q8N3J9 261 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 KIR2DL4Q99706 377 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 SMDT1Q9H4I9 107 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 CDC42SE2Q9NRR3 84 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 PLAC8Q9NZF1 115 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 NAT8Q9UHE5 227 aa7.05□□□□□ -1.28
CCDC47-206ENST00000584112 TMA7Q9Y2S6 64 aaKnown RBP7.05□□□□□ -1.28
CCDC47-206ENST00000584112 A0A1B0GW15 77 aa7.04□□□□□ -1.28
CCDC47-206ENST00000584112 SMIM27A0A1W2PRY6 76 aa7.04□□□□□ -1.28
CCDC47-206ENST00000584112 SUMO2P61956 95 aaKnown RBP7.04□□□□□ -1.28
CCDC47-206ENST00000584112 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
CCDC47-206ENST00000584112 A0A1B0GVG6 124 aa7.03□□□□□ -1.28
CCDC47-206ENST00000584112 LINC00862A6NCI5 91 aa7.03□□□□□ -1.28
CCDC47-206ENST00000584112 SMKR1H3BMG3 65 aa7.03□□□□□ -1.28
CCDC47-206ENST00000584112 FAM104BQ5XKR9 115 aa7.03□□□□□ -1.28
CCDC47-206ENST00000584112 CD164L2Q6UWJ8 174 aa7.03□□□□□ -1.28
CCDC47-206ENST00000584112 NRACQ8N912 160 aa7.03□□□□□ -1.28
CCDC47-206ENST00000584112 PRSS3P2Q8NHM4 247 aa7.03□□□□□ -1.28
CCDC47-206ENST00000584112 TMEM18Q96B42 140 aa7.03□□□□□ -1.28
CCDC47-206ENST00000584112 LINC00474Q9P2X8 69 aa7.03□□□□□ -1.28
CCDC47-206ENST00000584112 CSDC2Q9Y534 153 aaKnown RBP7.03□□□□□ -1.28
CCDC47-206ENST00000584112 IGKV2-24A0A0C4DH68 120 aa7.02□□□□□ -1.29
CCDC47-206ENST00000584112 C1orf196B1AJZ1 125 aa7.02□□□□□ -1.29
CCDC47-206ENST00000584112 ZNF561-AS1K7EIQ3 104 aa7.02□□□□□ -1.29
CCDC47-206ENST00000584112 TCAPO15273 167 aa7.02□□□□□ -1.29
CCDC47-206ENST00000584112 S100A8P05109 93 aa7.02□□□□□ -1.29
CCDC47-206ENST00000584112 CAMPP49913 170 aa7.02□□□□□ -1.29
CCDC47-206ENST00000584112 MAJINQ3KP22 176 aa7.02□□□□□ -1.29
CCDC47-206ENST00000584112 MRPL51Q4U2R6 128 aaKnown RBP7.02□□□□□ -1.29
CCDC47-206ENST00000584112 Q6ZRU5 148 aa7.02□□□□□ -1.29
CCDC47-206ENST00000584112 CARD19Q96LW7 228 aa7.02□□□□□ -1.29
CCDC47-206ENST00000584112 C9JQL5 133 aa7.01□□□□□ -1.29
CCDC47-206ENST00000584112 CKS2P33552 79 aa7.01□□□□□ -1.29
CCDC47-206ENST00000584112 C20orf78Q9BR46 151 aa7.01□□□□□ -1.29
CCDC47-206ENST00000584112 UBE2D4Q9Y2X8 147 aa7.01□□□□□ -1.29
CCDC47-206ENST00000584112 TRBV24-1A0A075B6N3 115 aa7□□□□□ -1.29
CCDC47-206ENST00000584112 A0A096LNI7 61 aa7□□□□□ -1.29
CCDC47-206ENST00000584112 F8W036 122 aa7□□□□□ -1.29
CCDC47-206ENST00000584112 PHOX2AO14813 284 aa7□□□□□ -1.29
CCDC47-206ENST00000584112 MALP21145 153 aa7□□□□□ -1.29
CCDC47-206ENST00000584112 RPL32P62910 135 aaKnown RBP7□□□□□ -1.29
CCDC47-206ENST00000584112 HBBP68871 147 aa7□□□□□ -1.29
CCDC47-206ENST00000584112 SRSF3P84103 164 aaKnown RBP7□□□□□ -1.29
CCDC47-206ENST00000584112 STPG4Q8N801 248 aa7□□□□□ -1.29
CCDC47-206ENST00000584112 TIMM21Q9BVV7 248 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms