RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 CT83Q5H943 113 aa9.05□□□□□ -0.96
ITGB4-208ENST00000582629 BORCS7Q96B45 105 aa9.05□□□□□ -0.96
ITGB4-208ENST00000582629 MRAP2Q96G30 205 aa9.05□□□□□ -0.96
ITGB4-208ENST00000582629 CARD19Q96LW7 228 aa9.05□□□□□ -0.96
ITGB4-208ENST00000582629 ST20Q9HBF5 79 aa9.05□□□□□ -0.96
ITGB4-208ENST00000582629 TMEM242Q9NWH2 141 aa9.05□□□□□ -0.96
ITGB4-208ENST00000582629 TSHBP01222 138 aa9.04□□□□□ -0.96
ITGB4-208ENST00000582629 BLOC1S1P78537 153 aa9.04□□□□□ -0.96
ITGB4-208ENST00000582629 SS18Q15532 418 aa9.04□□□□□ -0.96
ITGB4-208ENST00000582629 CD164L2Q6UWJ8 174 aa9.03□□□□□ -0.96
ITGB4-208ENST00000582629 MRPL52Q86TS9 123 aaKnown RBP9.03□□□□□ -0.96
ITGB4-208ENST00000582629 LINC00526Q96FQ7 95 aa9.03□□□□□ -0.96
ITGB4-208ENST00000582629 ZNF561-AS1K7EIQ3 104 aa9.02□□□□□ -0.97
ITGB4-208ENST00000582629 GAS8-AS1O95177 125 aa9.02□□□□□ -0.97
ITGB4-208ENST00000582629 POLR2KP53803 58 aaKnown RBP9.02□□□□□ -0.97
ITGB4-208ENST00000582629 SPINK6Q6UWN8 80 aa9.02□□□□□ -0.97
ITGB4-208ENST00000582629 TMEM191AQ9H0A3 160 aa9.02□□□□□ -0.97
ITGB4-208ENST00000582629 CDC42SE2Q9NRR3 84 aa9.02□□□□□ -0.97
ITGB4-208ENST00000582629 A0A1B0GUT8 65 aa9.01□□□□□ -0.97
ITGB4-208ENST00000582629 C7orf77A4D0Y5 90 aa9.01□□□□□ -0.97
ITGB4-208ENST00000582629 CEBPGP53567 150 aa9.01□□□□□ -0.97
ITGB4-208ENST00000582629 SYCNQ0VAF6 134 aa9.01□□□□□ -0.97
ITGB4-208ENST00000582629 REG3GQ6UW15 175 aa9.01□□□□□ -0.97
ITGB4-208ENST00000582629 ZNF664Q8N3J9 261 aa9.01□□□□□ -0.97
ITGB4-208ENST00000582629 TSKUQ8WUA8 353 aa9.01□□□□□ -0.97
ITGB4-208ENST00000582629 A0A0J9YXV3 536 aa9□□□□□ -0.97
ITGB4-208ENST00000582629 TRBV27A0A0K0K1C4 114 aa9□□□□□ -0.97
ITGB4-208ENST00000582629 HIGD1CA8MV81 97 aa9□□□□□ -0.97
ITGB4-208ENST00000582629 IFITM2Q01629 132 aa9□□□□□ -0.97
ITGB4-208ENST00000582629 ISOC2Q96AB3 205 aa9□□□□□ -0.97
ITGB4-208ENST00000582629 RAB4AP20338 218 aa8.99□□□□□ -0.97
ITGB4-208ENST00000582629 CAMPP49913 170 aa8.99□□□□□ -0.97
ITGB4-208ENST00000582629 Q6ZRP5 223 aa8.99□□□□□ -0.97
ITGB4-208ENST00000582629 PTTG1IPP53801 180 aa8.98□□□□□ -0.97
ITGB4-208ENST00000582629 SMAGPQ0VAQ4 97 aa8.98□□□□□ -0.97
ITGB4-208ENST00000582629 LINC01551Q86U37 167 aa8.98□□□□□ -0.97
ITGB4-208ENST00000582629 AMN1Q8IY45 258 aa8.98□□□□□ -0.97
ITGB4-208ENST00000582629 SMIM7Q9BQ49 75 aa8.98□□□□□ -0.97
ITGB4-208ENST00000582629 OSTCQ9NRP0 149 aa8.98□□□□□ -0.97
ITGB4-208ENST00000582629 LOC107984640A0A0U1RRK4 108 aa8.97□□□□□ -0.97
ITGB4-208ENST00000582629 C1orf196B1AJZ1 125 aa8.97□□□□□ -0.97
ITGB4-208ENST00000582629 COX7A2LO14548 114 aa8.97□□□□□ -0.97
ITGB4-208ENST00000582629 VCYO14598 125 aa8.97□□□□□ -0.97
ITGB4-208ENST00000582629 MALP21145 153 aa8.97□□□□□ -0.97
ITGB4-208ENST00000582629 FCER1GP30273 86 aa8.97□□□□□ -0.97
ITGB4-208ENST00000582629 SRSF3P84103 164 aaKnown RBP8.97□□□□□ -0.97
ITGB4-208ENST00000582629 SRSF9Q13242 221 aaKnown RBP eCLIP8.97□□□□□ -0.97
ITGB4-208ENST00000582629 IGLV4-69A0A075B6H9 119 aa8.96□□□□□ -0.98
ITGB4-208ENST00000582629 PPP1R17O96001 155 aa8.96□□□□□ -0.98
ITGB4-208ENST00000582629 KRTAP10-8P60410 259 aa8.96□□□□□ -0.98
ITGB4-208ENST00000582629 GAGE2BQ13066 116 aa8.96□□□□□ -0.98
ITGB4-208ENST00000582629 RIGQ13278 110 aa8.96□□□□□ -0.98
ITGB4-208ENST00000582629 EIF5A2Q9GZV4 153 aaKnown RBP8.96□□□□□ -0.98
ITGB4-208ENST00000582629 UBE2D4Q9Y2X8 147 aa8.96□□□□□ -0.98
ITGB4-208ENST00000582629 CSDC2Q9Y534 153 aaKnown RBP8.96□□□□□ -0.98
ITGB4-208ENST00000582629 ZNF727A8MUV8 499 aa8.95□□□□□ -0.98
ITGB4-208ENST00000582629 C9JQL5 133 aa8.95□□□□□ -0.98
ITGB4-208ENST00000582629 SMKR1H3BMG3 65 aa8.95□□□□□ -0.98
ITGB4-208ENST00000582629 ODF1Q14990 250 aa8.95□□□□□ -0.98
ITGB4-208ENST00000582629 NUP35Q8NFH5 326 aa8.95□□□□□ -0.98
ITGB4-208ENST00000582629 SUMO2P61956 95 aaKnown RBP8.94□□□□□ -0.98
ITGB4-208ENST00000582629 NRACQ8N912 160 aa8.94□□□□□ -0.98
ITGB4-208ENST00000582629 C2orf48Q96LS8 159 aa8.94□□□□□ -0.98
ITGB4-208ENST00000582629 CAMK2N2Q96S95 79 aa8.94□□□□□ -0.98
ITGB4-208ENST00000582629 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
ITGB4-208ENST00000582629 V9GYV3 84 aa8.94□□□□□ -0.98
ITGB4-208ENST00000582629 TRAV13-1A0A0B4J241 112 aa8.93□□□□□ -0.98
ITGB4-208ENST00000582629 A0A1W2PNN7 141 aa8.93□□□□□ -0.98
ITGB4-208ENST00000582629 PPP1R2P9O14990 202 aa8.93□□□□□ -0.98
ITGB4-208ENST00000582629 APOMO95445 188 aa8.93□□□□□ -0.98
ITGB4-208ENST00000582629 SRP19P09132 144 aaKnown RBP8.93□□□□□ -0.98
ITGB4-208ENST00000582629 RNASE13Q5GAN3 156 aaKnown RBP8.93□□□□□ -0.98
ITGB4-208ENST00000582629 TMEM18Q96B42 140 aa8.93□□□□□ -0.98
ITGB4-208ENST00000582629 NAT8BQ9UHF3 227 aa8.92□□□□□ -0.98
ITGB4-208ENST00000582629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.91□□□□□ -0.98
ITGB4-208ENST00000582629 C9orf116Q5BN46 136 aaPredicted RBP8.91□□□□□ -0.98
ITGB4-208ENST00000582629 Q6ZUT4 128 aa8.91□□□□□ -0.98
ITGB4-208ENST00000582629 C5orf38Q86SI9 138 aa8.91□□□□□ -0.98
ITGB4-208ENST00000582629 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
ITGB4-208ENST00000582629 RPL18AQ02543 176 aaKnown RBP8.9□□□□□ -0.98
ITGB4-208ENST00000582629 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
ITGB4-208ENST00000582629 MRPL51Q4U2R6 128 aaKnown RBP8.9□□□□□ -0.98
ITGB4-208ENST00000582629 FAM104BQ5XKR9 115 aa8.9□□□□□ -0.98
ITGB4-208ENST00000582629 RNF213Q63HN8 5207 aa8.89□□□□□ -0.99
ITGB4-208ENST00000582629 LINC00862A6NCI5 91 aa8.89□□□□□ -0.99
ITGB4-208ENST00000582629 MT-ND6P03923 174 aa8.89□□□□□ -0.99
ITGB4-208ENST00000582629 RAB14P61106 215 aa8.89□□□□□ -0.99
ITGB4-208ENST00000582629 CLLU1Q5K131 121 aa8.89□□□□□ -0.99
ITGB4-208ENST00000582629 OR10D4PQ8NGN7 298 aa8.89□□□□□ -0.99
ITGB4-208ENST00000582629 C20orf78Q9BR46 151 aa8.89□□□□□ -0.99
ITGB4-208ENST00000582629 PSORS1C2Q9UIG4 136 aa8.89□□□□□ -0.99
ITGB4-208ENST00000582629 TCAPO15273 167 aa8.88□□□□□ -0.99
ITGB4-208ENST00000582629 RPL32P62910 135 aaKnown RBP8.88□□□□□ -0.99
ITGB4-208ENST00000582629 TMEM241Q24JQ0 296 aa8.88□□□□□ -0.99
ITGB4-208ENST00000582629 RNF151Q2KHN1 245 aa8.88□□□□□ -0.99
ITGB4-208ENST00000582629 FAM74A3Q4VXF1 159 aa8.88□□□□□ -0.99
ITGB4-208ENST00000582629 TRBV24-1A0A075B6N3 115 aa8.87□□□□□ -0.99
ITGB4-208ENST00000582629 RPL23P62829 140 aaKnown RBP8.87□□□□□ -0.99
ITGB4-208ENST00000582629 PEA15Q15121 130 aa8.87□□□□□ -0.99
ITGB4-208ENST00000582629 PHF5AQ7RTV0 110 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms